Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:54 (805472): wrapper (7.7.26015): starting
00:03:54 (805472): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:54] Arguments: --nthreads 9
[2025-11-25 00:03:54] Threads: 9
[2025-11-25 00:03:54] Checking for CVMFS
[2025-11-25 00:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:55] 2.13.3.0 9955 28120 299700 153270 2 181 32145462 32935937 28338 16776704 0 164823103 99.794 88511069 33143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:55] CVMFS is ok
[2025-11-25 00:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:55] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:55] Checking for apptainer binary...
[2025-11-25 00:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:55] Running /usr/bin/apptainer --version
[2025-11-25 00:03:55] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:55] c-5-1.aglt2.org
[2025-11-25 00:03:55] apptainer works
[2025-11-25 00:03:55] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:55] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:55] Starting ATLAS job with PandaID=6891570540
[2025-11-25 00:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:09:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:09:27] 2025-11-25 21:08:52,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:09:27] 2025-11-25 21:08:52,877 | INFO     | time since job start (57878s) is within the limit (172800.0s)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,262 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 16:09:27] 2025-11-25 21:08:54,269 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.037875000001
[2025-11-25 16:09:27] 2025-11-25 21:08:54,276 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891570540/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,277 | INFO     | extracted standard info from prmon json
[2025-11-25 16:09:27] 2025-11-25 21:08:54,277 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 16:09:27] 2025-11-25 21:08:54,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:09:27] 2025-11-25 21:08:54,298 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:09:27] 2025-11-25 21:08:54,299 | INFO     | sum of square deviations: 264169190380.87247
[2025-11-25 16:09:27] 2025-11-25 21:08:54,326 | INFO     | sum of deviations: 2491230672243.454
[2025-11-25 16:09:27] 2025-11-25 21:08:54,326 | INFO     | mean x: 1764075978.67827
[2025-11-25 16:09:27] 2025-11-25 21:08:54,326 | INFO     | mean y: 3072722.080168776
[2025-11-25 16:09:27] 2025-11-25 21:08:54,326 | INFO     | intersect: -16632933088.873785
[2025-11-25 16:09:27] 2025-11-25 21:08:54,328 | INFO     | chi2: 7.23660688715524
[2025-11-25 16:09:27] 2025-11-25 21:08:54,329 | INFO     | sum of square deviations: 260011732917.02182
[2025-11-25 16:09:27] 2025-11-25 21:08:54,356 | INFO     | sum of deviations: 2843915908109.057
[2025-11-25 16:09:27] 2025-11-25 21:08:54,356 | INFO     | mean x: 1764075826.1898198
[2025-11-25 16:09:27] 2025-11-25 21:08:54,356 | INFO     | mean y: 3085662.318133616
[2025-11-25 16:09:27] 2025-11-25 21:08:54,356 | INFO     | intersect: -19291748647.38168
[2025-11-25 16:09:27] 2025-11-25 21:08:54,358 | INFO     | chi2: 3.8334506735944354
[2025-11-25 16:09:27] 2025-11-25 21:08:54,358 | INFO     | current chi2=3.8334506735944354 (change=47.02695982562359 %)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,359 | INFO     | sum of square deviations: 255897964789.61777
[2025-11-25 16:09:27] 2025-11-25 21:08:54,384 | INFO     | sum of deviations: 2960421105541.3604
[2025-11-25 16:09:27] 2025-11-25 21:08:54,385 | INFO     | mean x: 1764075673.6982942
[2025-11-25 16:09:27] 2025-11-25 21:08:54,385 | INFO     | mean y: 3089975.223880597
[2025-11-25 16:09:27] 2025-11-25 21:08:54,385 | INFO     | intersect: -20405070990.34706
[2025-11-25 16:09:27] 2025-11-25 21:08:54,387 | INFO     | chi2: 3.230023621502805
[2025-11-25 16:09:27] 2025-11-25 21:08:54,387 | INFO     | current chi2=3.230023621502805 (change=15.741093429169576 %)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,387 | INFO     | right removable region: 937
[2025-11-25 16:09:27] 2025-11-25 21:08:54,389 | INFO     | sum of square deviations: 260010473267.02188
[2025-11-25 16:09:27] 2025-11-25 21:08:54,413 | INFO     | sum of deviations: 2151129510082.7634
[2025-11-25 16:09:27] 2025-11-25 21:08:54,413 | INFO     | mean x: 1764076131.1898198
[2025-11-25 16:09:27] 2025-11-25 21:08:54,414 | INFO     | mean y: 3085187.079533404
[2025-11-25 16:09:27] 2025-11-25 21:08:54,414 | INFO     | intersect: -14591543160.594633
[2025-11-25 16:09:27] 2025-11-25 21:08:54,415 | INFO     | chi2: 4.325633743072716
[2025-11-25 16:09:27] 2025-11-25 21:08:54,415 | INFO     | current chi2=4.325633743072716 (change=40.22566362212398 %)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,417 | INFO     | sum of square deviations: 255895962352.79797
[2025-11-25 16:09:27] 2025-11-25 21:08:54,443 | INFO     | sum of deviations: 2054857595290.3174
[2025-11-25 16:09:27] 2025-11-25 21:08:54,444 | INFO     | mean x: 1764076283.695096
[2025-11-25 16:09:27] 2025-11-25 21:08:54,444 | INFO     | mean y: 3088755.525586354
[2025-11-25 16:09:27] 2025-11-25 21:08:54,444 | INFO     | intersect: -14162533542.276758
[2025-11-25 16:09:27] 2025-11-25 21:08:54,445 | INFO     | chi2: 4.221067199324283
[2025-11-25 16:09:27] 2025-11-25 21:08:54,446 | INFO     | current chi2=4.221067199324283 (change=2.4173693372882328 %)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,446 | INFO     | left removable region: 20
[2025-11-25 16:09:27] 2025-11-25 21:08:54,447 | INFO     | sum of square deviations: 239090510024.4497
[2025-11-25 16:09:27] 2025-11-25 21:08:54,473 | INFO     | sum of deviations: 2388374034370.023
[2025-11-25 16:09:27] 2025-11-25 21:08:54,473 | INFO     | mean x: 1764076253.2300982
[2025-11-25 16:09:27] 2025-11-25 21:08:54,473 | INFO     | mean y: 3111918.2889858233
[2025-11-25 16:09:27] 2025-11-25 21:08:54,474 | INFO     | intersect: -17618975706.32091
[2025-11-25 16:09:27] 2025-11-25 21:08:54,475 | INFO     | chi2: 0.10402593758295507
[2025-11-25 16:09:27] 2025-11-25 21:08:54,475 | INFO     | current memory leak: 9.99 B/s (using 917 data points, chi2=0.10)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,476 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,476 | INFO     | ..............................
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . Timing measurements:
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . get job = 0 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . initial setup = 3 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . payload setup = 10 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . stage-in = 0 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . payload execution = 57831 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . stage-out = 4 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | . log creation = 0 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,477 | INFO     | ..............................
[2025-11-25 16:09:27] 2025-11-25 21:08:54,592 | INFO     | 
[2025-11-25 16:09:27] 2025-11-25 21:08:54,592 | INFO     | job summary report
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | --------------------------------------------------
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | PanDA job id: 6891570540
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | task id: 47493068
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | errors: (none)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | pilot state: finished 
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | transexitcode: 0
[2025-11-25 16:09:27] 2025-11-25 21:08:54,593 | INFO     | exeerrorcode: 0
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | exeerrordiag: 
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | exitcode: 0
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | exitmsg: OK
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | cpuconsumptiontime: 311098 s
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | nevents: 1000
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | neventsw: 0
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | pid: 823018
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | pgrp: 823018
[2025-11-25 16:09:27] 2025-11-25 21:08:54,594 | INFO     | corecount: 9
[2025-11-25 16:09:27] 2025-11-25 21:08:54,595 | INFO     | event service: False
[2025-11-25 16:09:27] 2025-11-25 21:08:54,595 | INFO     | sizes: {0: 2284128, 1: 2284327, 9: 2284589, 12: 2284617, 57845: 2336800, 57851: 2345799, 57852: 2345983, 57860: 2346229}
[2025-11-25 16:09:27] 2025-11-25 21:08:54,595 | INFO     | --------------------------------------------------
[2025-11-25 16:09:27] 2025-11-25 21:08:54,595 | INFO     | 
[2025-11-25 16:09:27] 2025-11-25 21:08:54,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 16:09:27] 2025-11-25 21:08:54,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:09:27] 2025-11-25 21:08:54,633 | INFO     | job 6891570540 has completed (purged errors)
[2025-11-25 16:09:27] 2025-11-25 21:08:54,633 | INFO     | overall cleanup function is called
[2025-11-25 16:09:27] 2025-11-25 21:08:55,653 | INFO     | --- collectZombieJob: --- 10, [823018]
[2025-11-25 16:09:27] 2025-11-25 21:08:55,653 | INFO     | zombie collector waiting for pid 823018
[2025-11-25 16:09:27] 2025-11-25 21:08:55,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:09:27] 2025-11-25 21:08:55,653 | INFO     | collected zombie processes
[2025-11-25 16:09:27] 2025-11-25 21:08:55,653 | INFO     | will attempt to kill all subprocesses of pid=823018
[2025-11-25 16:09:27] 2025-11-25 21:08:56,220 | INFO     | process IDs to be killed: [823018] (in reverse order)
[2025-11-25 16:09:27] 2025-11-25 21:08:56,392 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:09:27] 2025-11-25 21:08:56,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:09:27] 2025-11-25 21:08:56,411 | INFO     | did not find any defunct processes belonging to 823018
[2025-11-25 16:09:27] 2025-11-25 21:08:56,427 | INFO     | did not find any defunct processes belonging to 823018
[2025-11-25 16:09:27] 2025-11-25 21:08:56,429 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:09:27] 2025-11-25 21:08:56,429 | INFO     | ready for new job
[2025-11-25 16:09:27] 2025-11-25 21:08:56,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:09:27] 2025-11-25 21:08:56,434 | INFO     | ***************************************
[2025-11-25 16:09:27] 2025-11-25 21:08:56,434 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:09:27] 2025-11-25 21:08:56,435 | INFO     | ***************************************
[2025-11-25 16:09:27] 2025-11-25 21:08:56,435 | INFO     | 
[2025-11-25 16:09:27] 2025-11-25 21:08:56,437 | INFO     | architecture information:
[2025-11-25 16:09:27] 2025-11-25 21:08:56,437 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:09:27] 2025-11-25 21:08:56,460 | INFO     | cat /etc/os-release:
[2025-11-25 16:09:27] NAME="CentOS Linux"
[2025-11-25 16:09:27] VERSION="7 (Core)"
[2025-11-25 16:09:27] ID="centos"
[2025-11-25 16:09:27] ID_LIKE="rhel fedora"
[2025-11-25 16:09:27] VERSION_ID="7"
[2025-11-25 16:09:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:09:27] ANSI_COLOR="0;31"
[2025-11-25 16:09:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:09:27] HOME_URL="https://www.centos.org/"
[2025-11-25 16:09:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:09:27] 
[2025-11-25 16:09:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:09:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:09:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:09:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:09:27] 
[2025-11-25 16:09:27] 2025-11-25 21:08:56,460 | INFO     | ***************************************
[2025-11-25 16:09:27] 2025-11-25 21:08:56,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 16:09:27] 2025-11-25 21:08:56,983 | INFO     | sufficient remaining disk space (72381104128 B)
[2025-11-25 16:09:27] 2025-11-25 21:08:56,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:09:27] 2025-11-25 21:08:56,984 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:09:27] 2025-11-25 21:08:56,984 | INFO     | update_server=False
[2025-11-25 16:09:27] 2025-11-25 21:08:56,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:09:27] 2025-11-25 21:08:56,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:09:27] 2025-11-25 21:08:56,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:09:27] 2025-11-25 21:08:56,985 | INFO     | aborting loop
[2025-11-25 16:09:27] 2025-11-25 21:08:56,985 | INFO     | all data control threads have been joined
[2025-11-25 16:09:27] 2025-11-25 21:08:57,990 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:57,991 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:57,992 | INFO     | [data] control thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:58,033 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:09:27] 2025-11-25 21:08:58,059 | INFO     | all job control threads have been joined
[2025-11-25 16:09:27] 2025-11-25 21:08:58,154 | INFO     | all payload control threads have been joined
[2025-11-25 16:09:27] 2025-11-25 21:08:58,186 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:58,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:09:27] 2025-11-25 21:08:58,495 | INFO     | [job] validate thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:58,650 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,015 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,064 | INFO     | [job] control thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,160 | INFO     | [payload] control thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,181 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,193 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,506 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:08:59,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:09:27] 2025-11-25 21:09:00,268 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:09:00,610 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:09:00,992 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:09:07,568 | INFO     | job.realtimelogging is not enabled
[2025-11-25 16:09:27] 2025-11-25 21:09:08,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:09:27] 2025-11-25 21:09:09,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672562784064)>', '<ExcThread(monitor, started 139671900239616)>']
[2025-11-25 16:09:27] 2025-11-25 21:09:14,164 | INFO     | all workflow threads have been joined
[2025-11-25 16:09:27] 2025-11-25 21:09:14,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:09:27] 2025-11-25 21:09:14,165 | INFO     | traces error code: 0
[2025-11-25 16:09:27] 2025-11-25 21:09:14,165 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:09:27] 2025-11-25 21:09:26,552 | INFO     | PID=810820 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 16:09:27] 2025-11-25 21:09:26,552 | INFO     | .. there are 39 such processes running
[2025-11-25 16:09:27] 2025-11-25 21:09:26,553 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:09:27] 2025-11-25 21:09:26,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:09:27] 2025-11-25 21:09:26,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:09:27] 2025-11-25 21:09:26,553 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:09:27] 2025-11-25 21:09:26,553 | INFO     | [monitor] control thread has ended
[2025-11-25 16:09:27] 2025-11-25 21:09:26,702 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:09:27] 2025-11-25 21:09:26,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:09:27] 2025-11-25 21:09:26,708 [wrapper] pilotpid: 810820
[2025-11-25 16:09:27] 2025-11-25 21:09:26,711 [wrapper] Pilot exit status: 0
[2025-11-25 16:09:27] 2025-11-25 21:09:26,747 [wrapper] pandaids: 6891570540
[2025-11-25 16:09:27] 2025-11-25 21:09:26,914 [wrapper] cleanup supervisor_pilot 3935922 810821
[2025-11-25 16:09:27] 2025-11-25 21:09:26,920 [wrapper] Test setup, not cleaning
[2025-11-25 16:09:27] 2025-11-25 21:09:26,929 [wrapper] apfmon messages muted
[2025-11-25 16:09:27] 2025-11-25 21:09:26,941 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:09:27] 2025-11-25 21:09:26,963 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:09:27]  *** Error codes and diagnostics ***
[2025-11-25 16:09:27]     "exeErrorCode": 0,
[2025-11-25 16:09:27]     "exeErrorDiag": "",
[2025-11-25 16:09:27]     "pilotErrorCode": 0,
[2025-11-25 16:09:27]     "pilotErrorDiag": "",
[2025-11-25 16:09:27]  *** Listing of results directory ***
[2025-11-25 16:09:27] total 1336588
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:39 queuedata.json
[2025-11-25 16:09:27] -rwx------. 1 boincer umatlas     36292 Nov 18 10:40 runpilot2-wrapper.sh
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:09:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 16:09:27] -rw-r--r--. 2 boincer umatlas 411177397 Nov 25 00:03 EVNT.47493065._000240.pool.root.1
[2025-11-25 16:09:27] -rw-r--r--. 2 boincer umatlas     15120 Nov 25 00:03 start_atlas.sh
[2025-11-25 16:09:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 16:09:27] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 00:03 input.tar.gz
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas      2773 Nov 25 00:03 pandaJob.out
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 16:09:27] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas       533 Nov 25 15:57 boinc_task_state.xml
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas      6659 Nov 25 16:02 init_data.xml
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas 934131129 Nov 25 16:07 HITS.47493068._002397.pool.root.1
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas        95 Nov 25 16:08 pilot_heartbeat.json
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas      1057 Nov 25 16:08 memory_monitor_summary.json
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas   1516240 Nov 25 16:08 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas   2222938 Nov 25 16:08 log.47493068._002397.job.log.tgz.1
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas      8625 Nov 25 16:08 heartbeat.json
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 16:09 boinc_mmap_file
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas        29 Nov 25 16:09 wrapper_checkpoint.txt
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas       822 Nov 25 16:09 pilotlog.txt
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas   7499004 Nov 25 16:09 log.47493068._002397.job.log.1
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas       353 Nov 25 16:09 output.list
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas       620 Nov 25 16:09 runtime_log
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas   9738240 Nov 25 16:09 result.tar.gz
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas      8689 Nov 25 16:09 runtime_log.err
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas       657 Nov 25 16:09 oswKDmkzcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMdFKDmR3lIsm.diag
[2025-11-25 16:09:27] -rw-r--r--. 1 boincer umatlas     21299 Nov 25 16:09 stderr.txt
[2025-11-25 16:09:27] HITS file was successfully produced:
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas 934131129 Nov 25 16:07 shared/HITS.pool.root.1
[2025-11-25 16:09:27]  *** Contents of shared directory: ***
[2025-11-25 16:09:27] total 1323900
[2025-11-25 16:09:27] -rw-r--r--. 2 boincer umatlas 411177397 Nov 25 00:03 ATLAS.root_0
[2025-11-25 16:09:27] -rw-r--r--. 2 boincer umatlas     15120 Nov 25 00:03 start_atlas.sh
[2025-11-25 16:09:27] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 00:03 input.tar.gz
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas 934131129 Nov 25 16:07 HITS.pool.root.1
[2025-11-25 16:09:27] -rw-------. 1 boincer umatlas   9738240 Nov 25 16:09 result.tar.gz
16:09:28 (805472): run_atlas exited; CPU time 313403.632090
16:09:28 (805472): called boinc_finish(0)

</stderr_txt>
]]>

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