Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:22:13 (18625): wrapper (7.7.26015): starting
23:22:13 (18625): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 23:22:13] Arguments: --nthreads 12
[2025-11-24 23:22:13] Threads: 12
[2025-11-24 23:22:13] Checking for CVMFS
[2025-11-24 23:22:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:22:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:22:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:22:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:22:13] 2.11.2.0 2947 285709 91168 153270 2 80 14545499 20275201 1 130560 1 128758646 99.971 16369087 12756 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 23:22:13] CVMFS is ok
[2025-11-24 23:22:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:22:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:22:13] Further information can be found at the LHC@home message board.
[2025-11-24 23:22:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:22:13] Checking for apptainer binary...
[2025-11-24 23:22:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:22:13] Running /usr/bin/apptainer --version
[2025-11-24 23:22:13] apptainer version 1.3.2-1.el7
[2025-11-24 23:22:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:22:14] c-205-18.aglt2.org
[2025-11-24 23:22:15] apptainer works
[2025-11-24 23:22:15] Set ATHENA_PROC_NUMBER=12
[2025-11-24 23:22:15] Set ATHENA_CORE_NUMBER=12
[2025-11-24 23:22:15] Starting ATLAS job with PandaID=6895381194
[2025-11-24 23:22:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 06:24:17]  *** The last 200 lines of the pilot log: ***
[2025-11-25 06:24:17] 2025-11-25 11:23:32,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,442 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 06:24:17] 2025-11-25 11:23:32,446 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-25 06:24:17] 2025-11-25 11:23:32,449 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895381194/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,449 | INFO     | extracted standard info from prmon json
[2025-11-25 06:24:17] 2025-11-25 11:23:32,450 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 06:24:17] 2025-11-25 11:23:32,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 06:24:17] 2025-11-25 11:23:32,457 | INFO     | fitting pss+swap vs Time
[2025-11-25 06:24:17] 2025-11-25 11:23:32,458 | INFO     | sum of square deviations: 22002881817.635197
[2025-11-25 06:24:17] 2025-11-25 11:23:32,461 | INFO     | sum of deviations: 350756584371.51685
[2025-11-25 06:24:17] 2025-11-25 11:23:32,461 | INFO     | mean x: 1764057176.7077296
[2025-11-25 06:24:17] 2025-11-25 11:23:32,462 | INFO     | mean y: 3433101.4009661837
[2025-11-25 06:24:17] 2025-11-25 11:23:32,462 | INFO     | intersect: -28118095481.37476
[2025-11-25 06:24:17] 2025-11-25 11:23:32,462 | INFO     | chi2: 6.0804551366120565
[2025-11-25 06:24:17] 2025-11-25 11:23:32,463 | INFO     | sum of square deviations: 21215293279.916683
[2025-11-25 06:24:17] 2025-11-25 11:23:32,466 | INFO     | sum of deviations: 515215688823.9899
[2025-11-25 06:24:17] 2025-11-25 11:23:32,466 | INFO     | mean x: 1764057024.210269
[2025-11-25 06:24:17] 2025-11-25 11:23:32,467 | INFO     | mean y: 3464925.9070904646
[2025-11-25 06:24:17] 2025-11-25 11:23:32,467 | INFO     | intersect: -42836850447.61015
[2025-11-25 06:24:17] 2025-11-25 11:23:32,467 | INFO     | chi2: 2.822692366419706
[2025-11-25 06:24:17] 2025-11-25 11:23:32,467 | INFO     | current chi2=2.822692366419706 (change=53.57761379697523 %)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,468 | INFO     | sum of square deviations: 20446703527.11641
[2025-11-25 06:24:17] 2025-11-25 11:23:32,471 | INFO     | sum of deviations: 528611376555.98755
[2025-11-25 06:24:17] 2025-11-25 11:23:32,471 | INFO     | mean x: 1764056871.710396
[2025-11-25 06:24:17] 2025-11-25 11:23:32,471 | INFO     | mean y: 3467541.2648514854
[2025-11-25 06:24:17] 2025-11-25 11:23:32,472 | INFO     | intersect: -45602932044.917816
[2025-11-25 06:24:17] 2025-11-25 11:23:32,472 | INFO     | chi2: 2.6238644484252935
[2025-11-25 06:24:17] 2025-11-25 11:23:32,472 | INFO     | current chi2=2.6238644484252935 (change=7.043910287914416 %)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,472 | INFO     | right removable region: 403
[2025-11-25 06:24:17] 2025-11-25 11:23:32,473 | INFO     | sum of square deviations: 21215240819.916687
[2025-11-25 06:24:17] 2025-11-25 11:23:32,476 | INFO     | sum of deviations: 207767771426.35696
[2025-11-25 06:24:17] 2025-11-25 11:23:32,476 | INFO     | mean x: 1764057329.210269
[2025-11-25 06:24:17] 2025-11-25 11:23:32,477 | INFO     | mean y: 3460709.391198044
[2025-11-25 06:24:17] 2025-11-25 11:23:32,477 | INFO     | intersect: -17272527956.939114
[2025-11-25 06:24:17] 2025-11-25 11:23:32,477 | INFO     | chi2: 3.617864657095541
[2025-11-25 06:24:17] 2025-11-25 11:23:32,477 | INFO     | current chi2=3.617864657095541 (change=40.50010113040051 %)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,478 | INFO     | sum of square deviations: 20446623434.693108
[2025-11-25 06:24:17] 2025-11-25 11:23:32,481 | INFO     | sum of deviations: 175150462740.76242
[2025-11-25 06:24:17] 2025-11-25 11:23:32,481 | INFO     | mean x: 1764057481.7128713
[2025-11-25 06:24:17] 2025-11-25 11:23:32,482 | INFO     | mean y: 3467173.584158416
[2025-11-25 06:24:17] 2025-11-25 11:23:32,482 | INFO     | intersect: -15107853539.597988
[2025-11-25 06:24:17] 2025-11-25 11:23:32,482 | INFO     | chi2: 3.558368904347577
[2025-11-25 06:24:17] 2025-11-25 11:23:32,482 | INFO     | current chi2=3.558368904347577 (change=1.6444991282710903 %)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,482 | INFO     | left removable region: 20
[2025-11-25 06:24:17] 2025-11-25 11:23:32,483 | INFO     | sum of square deviations: 17421059115.869358
[2025-11-25 06:24:17] 2025-11-25 11:23:32,486 | INFO     | sum of deviations: 311000069515.89825
[2025-11-25 06:24:17] 2025-11-25 11:23:32,486 | INFO     | mean x: 1764057451.2114882
[2025-11-25 06:24:17] 2025-11-25 11:23:32,486 | INFO     | mean y: 3511637.7049608356
[2025-11-25 06:24:17] 2025-11-25 11:23:32,486 | INFO     | intersect: -31488373345.169308
[2025-11-25 06:24:17] 2025-11-25 11:23:32,487 | INFO     | chi2: 0.029621074666378356
[2025-11-25 06:24:17] 2025-11-25 11:23:32,487 | INFO     | current memory leak: 17.85 B/s (using 383 data points, chi2=0.03)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,487 | INFO     | could have reported an average CPU frequency of 2373 MHz (17 samples)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,487 | INFO     | ..............................
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . Timing measurements:
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . get job = 0 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . initial setup = 2 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . payload setup = 7 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . stage-in = 0 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . payload execution = 25229 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . stage-out = 3 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | . log creation = 0 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,488 | INFO     | ..............................
[2025-11-25 06:24:17] 2025-11-25 11:23:32,712 | INFO     | 
[2025-11-25 06:24:17] 2025-11-25 11:23:32,713 | INFO     | job summary report
[2025-11-25 06:24:17] 2025-11-25 11:23:32,713 | INFO     | --------------------------------------------------
[2025-11-25 06:24:17] 2025-11-25 11:23:32,713 | INFO     | PanDA job id: 6895381194
[2025-11-25 06:24:17] 2025-11-25 11:23:32,713 | INFO     | task id: 47556137
[2025-11-25 06:24:17] 2025-11-25 11:23:32,713 | INFO     | errors: (none)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,714 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 06:24:17] 2025-11-25 11:23:32,714 | INFO     | pilot state: finished 
[2025-11-25 06:24:17] 2025-11-25 11:23:32,714 | INFO     | transexitcode: 0
[2025-11-25 06:24:17] 2025-11-25 11:23:32,714 | INFO     | exeerrorcode: 0
[2025-11-25 06:24:17] 2025-11-25 11:23:32,714 | INFO     | exeerrordiag: 
[2025-11-25 06:24:17] 2025-11-25 11:23:32,714 | INFO     | exitcode: 0
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | exitmsg: OK
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | cpuconsumptiontime: 290246 s
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | nevents: 1000
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | neventsw: 0
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | pid: 28802
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | pgrp: 28802
[2025-11-25 06:24:17] 2025-11-25 11:23:32,715 | INFO     | corecount: 12
[2025-11-25 06:24:17] 2025-11-25 11:23:32,716 | INFO     | event service: False
[2025-11-25 06:24:17] 2025-11-25 11:23:32,716 | INFO     | sizes: {0: 2284088, 1: 2284287, 6: 2284549, 12: 2284577, 25237: 2321559, 25238: 2321558, 25241: 2330797, 25247: 2331051}
[2025-11-25 06:24:17] 2025-11-25 11:23:32,716 | INFO     | --------------------------------------------------
[2025-11-25 06:24:17] 2025-11-25 11:23:32,716 | INFO     | 
[2025-11-25 06:24:17] 2025-11-25 11:23:32,716 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 06:24:17] 2025-11-25 11:23:32,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,743 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,743 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,743 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,743 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,743 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,743 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,744 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,744 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 06:24:17] 2025-11-25 11:23:32,744 | INFO     | job 6895381194 has completed (purged errors)
[2025-11-25 06:24:17] 2025-11-25 11:23:32,744 | INFO     | overall cleanup function is called
[2025-11-25 06:24:17] 2025-11-25 11:23:33,761 | INFO     | --- collectZombieJob: --- 10, [28802]
[2025-11-25 06:24:17] 2025-11-25 11:23:33,761 | INFO     | zombie collector waiting for pid 28802
[2025-11-25 06:24:17] 2025-11-25 11:23:33,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 06:24:17] 2025-11-25 11:23:33,761 | INFO     | collected zombie processes
[2025-11-25 06:24:17] 2025-11-25 11:23:33,762 | INFO     | will attempt to kill all subprocesses of pid=28802
[2025-11-25 06:24:17] 2025-11-25 11:23:33,854 | INFO     | process IDs to be killed: [28802] (in reverse order)
[2025-11-25 06:24:17] 2025-11-25 11:23:33,905 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 06:24:17] 2025-11-25 11:23:33,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 06:24:17] 2025-11-25 11:23:33,908 | INFO     | did not find any defunct processes belonging to 28802
[2025-11-25 06:24:17] 2025-11-25 11:23:33,911 | INFO     | did not find any defunct processes belonging to 28802
[2025-11-25 06:24:17] 2025-11-25 11:23:33,913 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 06:24:17] 2025-11-25 11:23:33,913 | INFO     | ready for new job
[2025-11-25 06:24:17] 2025-11-25 11:23:33,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 06:24:17] 2025-11-25 11:23:33,915 | INFO     | ***************************************
[2025-11-25 06:24:17] 2025-11-25 11:23:33,915 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 06:24:17] 2025-11-25 11:23:33,915 | INFO     | ***************************************
[2025-11-25 06:24:17] 2025-11-25 11:23:33,915 | INFO     | 
[2025-11-25 06:24:17] 2025-11-25 11:23:33,916 | INFO     | architecture information:
[2025-11-25 06:24:17] 2025-11-25 11:23:33,916 | INFO     | executing command: cat /etc/os-release
[2025-11-25 06:24:17] 2025-11-25 11:23:33,931 | INFO     | cat /etc/os-release:
[2025-11-25 06:24:17] NAME="CentOS Linux"
[2025-11-25 06:24:17] VERSION="7 (Core)"
[2025-11-25 06:24:17] ID="centos"
[2025-11-25 06:24:17] ID_LIKE="rhel fedora"
[2025-11-25 06:24:17] VERSION_ID="7"
[2025-11-25 06:24:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 06:24:17] ANSI_COLOR="0;31"
[2025-11-25 06:24:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 06:24:17] HOME_URL="https://www.centos.org/"
[2025-11-25 06:24:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 06:24:17] 
[2025-11-25 06:24:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 06:24:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 06:24:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 06:24:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 06:24:17] 
[2025-11-25 06:24:17] 2025-11-25 11:23:33,932 | INFO     | ***************************************
[2025-11-25 06:24:17] 2025-11-25 11:23:34,435 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 06:24:17] 2025-11-25 11:23:34,451 | INFO     | sufficient remaining disk space (28258074624 B)
[2025-11-25 06:24:17] 2025-11-25 11:23:34,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 06:24:17] 2025-11-25 11:23:34,452 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 06:24:17] 2025-11-25 11:23:34,452 | INFO     | update_server=False
[2025-11-25 06:24:17] 2025-11-25 11:23:34,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 06:24:17] 2025-11-25 11:23:34,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:24:17] 2025-11-25 11:23:34,512 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 06:24:17] 2025-11-25 11:23:34,513 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 06:24:17] 2025-11-25 11:23:34,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 06:24:17] 2025-11-25 11:23:34,513 | INFO     | will abort loop
[2025-11-25 06:24:17] 2025-11-25 11:23:34,846 | INFO     | all payload control threads have been joined
[2025-11-25 06:24:17] 2025-11-25 11:23:34,968 | INFO     | all job control threads have been joined
[2025-11-25 06:24:17] 2025-11-25 11:23:35,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 06:24:17] 2025-11-25 11:23:35,153 | INFO     | all data control threads have been joined
[2025-11-25 06:24:17] 2025-11-25 11:23:35,458 | INFO     | [job] retrieve thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:35,458 | INFO     | [job] queue monitor thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:35,518 | INFO     | [job] job monitor thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:35,660 | INFO     | [payload] validate_post thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:35,848 | INFO     | [payload] control thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:35,973 | INFO     | [job] control thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,159 | INFO     | [data] control thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,167 | INFO     | [data] copytool_in thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,244 | INFO     | [payload] failed_post thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,285 | INFO     | [job] validate thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,382 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,722 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:36,877 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:37,057 | INFO     | [data] copytool_out thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:37,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 06:24:17] 2025-11-25 11:23:41,630 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:23:45,154 | INFO     | job.realtimelogging is not enabled
[2025-11-25 06:24:17] 2025-11-25 11:23:46,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 06:24:17] 2025-11-25 11:24:04,095 | INFO     | PID=22304 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 06:24:17] 2025-11-25 11:24:04,095 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 06:24:17] 2025-11-25 11:24:04,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 06:24:17] 2025-11-25 11:24:04,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 06:24:17] 2025-11-25 11:24:11,027 | INFO     | [monitor] cgroup control has ended
[2025-11-25 06:24:17] 2025-11-25 11:24:12,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227351689024)>', '<ExcThread(monitor, started 140226882152192)>']
[2025-11-25 06:24:17] 2025-11-25 11:24:13,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 06:24:17] 2025-11-25 11:24:13,131 | INFO     | [monitor] control thread has ended
[2025-11-25 06:24:17] 2025-11-25 11:24:17,482 | INFO     | all workflow threads have been joined
[2025-11-25 06:24:17] 2025-11-25 11:24:17,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 06:24:17] 2025-11-25 11:24:17,482 | INFO     | traces error code: 0
[2025-11-25 06:24:17] 2025-11-25 11:24:17,483 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 06:24:17] 2025-11-25 11:24:17,598 [wrapper] ==== pilot stdout END ====
[2025-11-25 06:24:17] 2025-11-25 11:24:17,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 06:24:17] 2025-11-25 11:24:17,605 [wrapper] pilotpid: 22304
[2025-11-25 06:24:17] 2025-11-25 11:24:17,609 [wrapper] Pilot exit status: 0
[2025-11-25 06:24:17] 2025-11-25 11:24:17,624 [wrapper] pandaids: 6895381194
[2025-11-25 06:24:17] 2025-11-25 11:24:17,663 [wrapper] cleanup supervisor_pilot  9505 22305
[2025-11-25 06:24:17] 2025-11-25 11:24:17,666 [wrapper] Test setup, not cleaning
[2025-11-25 06:24:17] 2025-11-25 11:24:17,670 [wrapper] apfmon messages muted
[2025-11-25 06:24:17] 2025-11-25 11:24:17,674 [wrapper] ==== wrapper stdout END ====
[2025-11-25 06:24:17] 2025-11-25 11:24:17,677 [wrapper] ==== wrapper stderr END ====
[2025-11-25 06:24:17]  *** Error codes and diagnostics ***
[2025-11-25 06:24:17]     "exeErrorCode": 0,
[2025-11-25 06:24:17]     "exeErrorDiag": "",
[2025-11-25 06:24:17]     "pilotErrorCode": 0,
[2025-11-25 06:24:17]     "pilotErrorDiag": "",
[2025-11-25 06:24:17]  *** Listing of results directory ***
[2025-11-25 06:24:17] total 1302792
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 21:53 pilot3.tar.gz
[2025-11-25 06:24:17] -rwx------ 1 boincer umatlas     36292 Nov 23 22:12 runpilot2-wrapper.sh
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 22:12 queuedata.json
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas       100 Nov 24 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 06:24:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 23:22 run_atlas
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas       105 Nov 24 23:22 job.xml
[2025-11-25 06:24:17] -rw-r--r-- 2 boincer umatlas 408688077 Nov 24 23:22 EVNT.47483658._000993.pool.root.1
[2025-11-25 06:24:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:22 start_atlas.sh
[2025-11-25 06:24:17] drwxrwx--x 2 boincer umatlas      4096 Nov 24 23:22 shared
[2025-11-25 06:24:17] -rw-r--r-- 2 boincer umatlas    590094 Nov 24 23:22 input.tar.gz
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas         0 Nov 24 23:22 boinc_lockfile
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 23:22 pandaJob.out
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas        57 Nov 24 23:22 setup.sh.local
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas    991801 Nov 24 23:22 agis_schedconf.cvmfs.json
[2025-11-25 06:24:17] drwx------ 5 boincer umatlas      4096 Nov 24 23:22 pilot3
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas       533 Nov 25 06:15 boinc_task_state.xml
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 06:18 init_data.xml
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas 910053680 Nov 25 06:22 HITS.47556137._009798.pool.root.1
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas      1061 Nov 25 06:23 memory_monitor_summary.json
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas   1516240 Nov 25 06:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas   2159676 Nov 25 06:23 log.47556137._009798.job.log.tgz.1
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas        95 Nov 25 06:23 pilot_heartbeat.json
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas      8666 Nov 25 06:23 heartbeat.json
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 06:23 boinc_mmap_file
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas        29 Nov 25 06:23 wrapper_checkpoint.txt
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas      5004 Nov 25 06:24 pilotlog.txt
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas   3539357 Nov 25 06:24 log.47556137._009798.job.log.1
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas       353 Nov 25 06:24 output.list
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas       620 Nov 25 06:24 runtime_log
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas   5713920 Nov 25 06:24 result.tar.gz
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas       670 Nov 25 06:24 XHUKDmOBch8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiNLKDmVnnVWm.diag
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 06:24 runtime_log.err
[2025-11-25 06:24:17] -rw-r--r-- 1 boincer umatlas     21304 Nov 25 06:24 stderr.txt
[2025-11-25 06:24:17] HITS file was successfully produced:
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas 910053680 Nov 25 06:22 shared/HITS.pool.root.1
[2025-11-25 06:24:17]  *** Contents of shared directory: ***
[2025-11-25 06:24:17] total 1294020
[2025-11-25 06:24:17] -rw-r--r-- 2 boincer umatlas 408688077 Nov 24 23:22 ATLAS.root_0
[2025-11-25 06:24:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 23:22 start_atlas.sh
[2025-11-25 06:24:17] -rw-r--r-- 2 boincer umatlas    590094 Nov 24 23:22 input.tar.gz
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas 910053680 Nov 25 06:22 HITS.pool.root.1
[2025-11-25 06:24:17] -rw------- 1 boincer umatlas   5713920 Nov 25 06:24 result.tar.gz
06:24:19 (18625): run_atlas exited; CPU time 283627.174539
06:24:19 (18625): called boinc_finish(0)

</stderr_txt>
]]>

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