Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:55:42 (3833): wrapper (7.7.26015): starting
21:55:42 (3833): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 21:55:42] Arguments: --nthreads 8
[2025-11-24 21:55:42] Threads: 8
[2025-11-24 21:55:42] Checking for CVMFS
[2025-11-24 21:55:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 21:55:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 21:55:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 21:55:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 21:55:43] 2.11.2.0 8539 115702 145472 153266 3 90 14148078 18432000 1885 130560 0 87275621 99.974 4804833 31537 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 21:55:43] CVMFS is ok
[2025-11-24 21:55:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 21:55:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 21:55:43] Further information can be found at the LHC@home message board.
[2025-11-24 21:55:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 21:55:43] Checking for apptainer binary...
[2025-11-24 21:55:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 21:55:43] Running /usr/bin/apptainer --version
[2025-11-24 21:55:43] apptainer version 1.3.2-1.el7
[2025-11-24 21:55:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 21:55:44] c-206-1.aglt2.org
[2025-11-24 21:55:44] apptainer works
[2025-11-24 21:55:44] Set ATHENA_PROC_NUMBER=8
[2025-11-24 21:55:44] Set ATHENA_CORE_NUMBER=8
[2025-11-24 21:55:44] Starting ATLAS job with PandaID=6891576573
[2025-11-24 21:55:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 17:23:57]  *** The last 200 lines of the pilot log: ***
[2025-11-25 17:23:57] 2025-11-25 22:23:16,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,128 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 17:23:57] 2025-11-25 22:23:17,133 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2472.375
[2025-11-25 17:23:57] 2025-11-25 22:23:17,136 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6891576573/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,136 | INFO     | extracted standard info from prmon json
[2025-11-25 17:23:57] 2025-11-25 22:23:17,136 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 17:23:57] 2025-11-25 22:23:17,137 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 17:23:57] 2025-11-25 22:23:17,151 | INFO     | fitting pss+swap vs Time
[2025-11-25 17:23:57] 2025-11-25 22:23:17,153 | INFO     | sum of square deviations: 469139642204.35803
[2025-11-25 17:23:57] 2025-11-25 22:23:17,177 | INFO     | sum of deviations: 2573944962630.0234
[2025-11-25 17:23:57] 2025-11-25 22:23:17,177 | INFO     | mean x: 1764074363.0635889
[2025-11-25 17:23:57] 2025-11-25 22:23:17,177 | INFO     | mean y: 3263381.931184669
[2025-11-25 17:23:57] 2025-11-25 22:23:17,178 | INFO     | intersect: -9675369400.361778
[2025-11-25 17:23:57] 2025-11-25 22:23:17,179 | INFO     | chi2: 5.391094898901582
[2025-11-25 17:23:57] 2025-11-25 22:23:17,181 | INFO     | sum of square deviations: 463036599522.76324
[2025-11-25 17:23:57] 2025-11-25 22:23:17,225 | INFO     | sum of deviations: 2954509416357.6885
[2025-11-25 17:23:57] 2025-11-25 22:23:17,225 | INFO     | mean x: 1764074210.5660543
[2025-11-25 17:23:57] 2025-11-25 22:23:17,226 | INFO     | mean y: 3272887.275590551
[2025-11-25 17:23:57] 2025-11-25 22:23:17,226 | INFO     | intersect: -11252800329.491669
[2025-11-25 17:23:57] 2025-11-25 22:23:17,227 | INFO     | chi2: 2.8681858468960693
[2025-11-25 17:23:57] 2025-11-25 22:23:17,228 | INFO     | current chi2=2.8681858468960693 (change=46.79771176945054 %)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,229 | INFO     | sum of square deviations: 456986720628.65393
[2025-11-25 17:23:57] 2025-11-25 22:23:17,273 | INFO     | sum of deviations: 3024488583513.967
[2025-11-25 17:23:57] 2025-11-25 22:23:17,273 | INFO     | mean x: 1764074058.0685413
[2025-11-25 17:23:57] 2025-11-25 22:23:17,274 | INFO     | mean y: 3274647.641476274
[2025-11-25 17:23:57] 2025-11-25 22:23:17,274 | INFO     | intersect: -11671948303.611425
[2025-11-25 17:23:57] 2025-11-25 22:23:17,275 | INFO     | chi2: 2.660300608791302
[2025-11-25 17:23:57] 2025-11-25 22:23:17,276 | INFO     | current chi2=2.660300608791302 (change=7.2479695947784935 %)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,276 | INFO     | right removable region: 1137
[2025-11-25 17:23:57] 2025-11-25 22:23:17,278 | INFO     | sum of square deviations: 463036204852.76324
[2025-11-25 17:23:57] 2025-11-25 22:23:17,322 | INFO     | sum of deviations: 2209811889218.495
[2025-11-25 17:23:57] 2025-11-25 22:23:17,322 | INFO     | mean x: 1764074515.5660543
[2025-11-25 17:23:57] 2025-11-25 22:23:17,322 | INFO     | mean y: 3272470.9868766405
[2025-11-25 17:23:57] 2025-11-25 22:23:17,323 | INFO     | intersect: -8415664962.220535
[2025-11-25 17:23:57] 2025-11-25 22:23:17,324 | INFO     | chi2: 3.0951440774402017
[2025-11-25 17:23:57] 2025-11-25 22:23:17,324 | INFO     | current chi2=3.0951440774402017 (change=42.58783910350331 %)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,326 | INFO     | sum of square deviations: 456986070856.9238
[2025-11-25 17:23:57] 2025-11-25 22:23:17,368 | INFO     | sum of deviations: 2108923239960.707
[2025-11-25 17:23:57] 2025-11-25 22:23:17,368 | INFO     | mean x: 1764074668.066784
[2025-11-25 17:23:57] 2025-11-25 22:23:17,368 | INFO     | mean y: 3275013.6748681897
[2025-11-25 17:23:57] 2025-11-25 22:23:17,368 | INFO     | intersect: -8137669102.052426
[2025-11-25 17:23:57] 2025-11-25 22:23:17,369 | INFO     | chi2: 3.011791304864128
[2025-11-25 17:23:57] 2025-11-25 22:23:17,369 | INFO     | current chi2=3.011791304864128 (change=2.693017529736764 %)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,370 | INFO     | left removable region: 20
[2025-11-25 17:23:57] 2025-11-25 22:23:17,371 | INFO     | sum of square deviations: 432151503221.73334
[2025-11-25 17:23:57] 2025-11-25 22:23:17,393 | INFO     | sum of deviations: 2407744939209.379
[2025-11-25 17:23:57] 2025-11-25 22:23:17,393 | INFO     | mean x: 1764074637.5702775
[2025-11-25 17:23:57] 2025-11-25 22:23:17,393 | INFO     | mean y: 3290183.7403760073
[2025-11-25 17:23:57] 2025-11-25 22:23:17,393 | INFO     | intersect: -9825304069.275858
[2025-11-25 17:23:57] 2025-11-25 22:23:17,395 | INFO     | chi2: 0.21155094212803682
[2025-11-25 17:23:57] 2025-11-25 22:23:17,395 | INFO     | current memory leak: 5.57 B/s (using 1117 data points, chi2=0.21)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,396 | INFO     | could have reported an average CPU frequency of 2620 MHz (42 samples)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,396 | INFO     | ..............................
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . Timing measurements:
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . get job = 0 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . initial setup = 2 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . payload setup = 5 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . stage-in = 0 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . payload execution = 70007 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,397 | INFO     | . stage-out = 4 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,398 | INFO     | . log creation = 0 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,398 | INFO     | ..............................
[2025-11-25 17:23:57] 2025-11-25 22:23:17,557 | INFO     | 
[2025-11-25 17:23:57] 2025-11-25 22:23:17,557 | INFO     | job summary report
[2025-11-25 17:23:57] 2025-11-25 22:23:17,557 | INFO     | --------------------------------------------------
[2025-11-25 17:23:57] 2025-11-25 22:23:17,558 | INFO     | PanDA job id: 6891576573
[2025-11-25 17:23:57] 2025-11-25 22:23:17,558 | INFO     | task id: 47493068
[2025-11-25 17:23:57] 2025-11-25 22:23:17,558 | INFO     | errors: (none)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 17:23:57] 2025-11-25 22:23:17,558 | INFO     | pilot state: finished 
[2025-11-25 17:23:57] 2025-11-25 22:23:17,558 | INFO     | transexitcode: 0
[2025-11-25 17:23:57] 2025-11-25 22:23:17,559 | INFO     | exeerrorcode: 0
[2025-11-25 17:23:57] 2025-11-25 22:23:17,559 | INFO     | exeerrordiag: 
[2025-11-25 17:23:57] 2025-11-25 22:23:17,559 | INFO     | exitcode: 0
[2025-11-25 17:23:57] 2025-11-25 22:23:17,559 | INFO     | exitmsg: OK
[2025-11-25 17:23:57] 2025-11-25 22:23:17,559 | INFO     | cpuconsumptiontime: 541923 s
[2025-11-25 17:23:57] 2025-11-25 22:23:17,559 | INFO     | nevents: 1000
[2025-11-25 17:23:57] 2025-11-25 22:23:17,560 | INFO     | neventsw: 0
[2025-11-25 17:23:57] 2025-11-25 22:23:17,560 | INFO     | pid: 14069
[2025-11-25 17:23:57] 2025-11-25 22:23:17,560 | INFO     | pgrp: 14069
[2025-11-25 17:23:57] 2025-11-25 22:23:17,560 | INFO     | corecount: 8
[2025-11-25 17:23:57] 2025-11-25 22:23:17,560 | INFO     | event service: False
[2025-11-25 17:23:57] 2025-11-25 22:23:17,561 | INFO     | sizes: {0: 2284128, 1: 2284327, 5: 2284589, 12: 2284645, 70016: 2341235, 70021: 2350234, 70023: 2350418, 70028: 2350664}
[2025-11-25 17:23:57] 2025-11-25 22:23:17,561 | INFO     | --------------------------------------------------
[2025-11-25 17:23:57] 2025-11-25 22:23:17,561 | INFO     | 
[2025-11-25 17:23:57] 2025-11-25 22:23:17,561 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 17:23:57] 2025-11-25 22:23:17,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 17:23:57] 2025-11-25 22:23:17,581 | INFO     | job 6891576573 has completed (purged errors)
[2025-11-25 17:23:57] 2025-11-25 22:23:17,581 | INFO     | overall cleanup function is called
[2025-11-25 17:23:57] 2025-11-25 22:23:18,597 | INFO     | --- collectZombieJob: --- 10, [14069]
[2025-11-25 17:23:57] 2025-11-25 22:23:18,597 | INFO     | zombie collector waiting for pid 14069
[2025-11-25 17:23:57] 2025-11-25 22:23:18,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 17:23:57] 2025-11-25 22:23:18,598 | INFO     | collected zombie processes
[2025-11-25 17:23:57] 2025-11-25 22:23:18,598 | INFO     | will attempt to kill all subprocesses of pid=14069
[2025-11-25 17:23:57] 2025-11-25 22:23:18,769 | INFO     | process IDs to be killed: [14069] (in reverse order)
[2025-11-25 17:23:57] 2025-11-25 22:23:18,815 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 17:23:57] 2025-11-25 22:23:18,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 17:23:57] 2025-11-25 22:23:18,818 | INFO     | did not find any defunct processes belonging to 14069
[2025-11-25 17:23:57] 2025-11-25 22:23:18,820 | INFO     | did not find any defunct processes belonging to 14069
[2025-11-25 17:23:57] 2025-11-25 22:23:18,821 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 17:23:57] 2025-11-25 22:23:18,822 | INFO     | ready for new job
[2025-11-25 17:23:57] 2025-11-25 22:23:18,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 17:23:57] 2025-11-25 22:23:18,910 | INFO     | ***************************************
[2025-11-25 17:23:57] 2025-11-25 22:23:18,910 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 17:23:57] 2025-11-25 22:23:18,910 | INFO     | ***************************************
[2025-11-25 17:23:57] 2025-11-25 22:23:18,910 | INFO     | 
[2025-11-25 17:23:57] 2025-11-25 22:23:18,912 | INFO     | architecture information:
[2025-11-25 17:23:57] 2025-11-25 22:23:18,912 | INFO     | executing command: cat /etc/os-release
[2025-11-25 17:23:57] 2025-11-25 22:23:18,931 | INFO     | cat /etc/os-release:
[2025-11-25 17:23:57] NAME="CentOS Linux"
[2025-11-25 17:23:57] VERSION="7 (Core)"
[2025-11-25 17:23:57] ID="centos"
[2025-11-25 17:23:57] ID_LIKE="rhel fedora"
[2025-11-25 17:23:57] VERSION_ID="7"
[2025-11-25 17:23:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 17:23:57] ANSI_COLOR="0;31"
[2025-11-25 17:23:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 17:23:57] HOME_URL="https://www.centos.org/"
[2025-11-25 17:23:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 17:23:57] 
[2025-11-25 17:23:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 17:23:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 17:23:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 17:23:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 17:23:57] 
[2025-11-25 17:23:57] 2025-11-25 22:23:18,932 | INFO     | ***************************************
[2025-11-25 17:23:57] 2025-11-25 22:23:19,435 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 17:23:57] 2025-11-25 22:23:19,458 | INFO     | sufficient remaining disk space (26635927552 B)
[2025-11-25 17:23:57] 2025-11-25 22:23:19,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 17:23:57] 2025-11-25 22:23:19,459 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 17:23:57] 2025-11-25 22:23:19,459 | INFO     | update_server=False
[2025-11-25 17:23:57] 2025-11-25 22:23:19,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 17:23:57] 2025-11-25 22:23:19,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:23:57] 2025-11-25 22:23:19,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 17:23:57] 2025-11-25 22:23:19,498 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 17:23:57] 2025-11-25 22:23:19,498 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 17:23:57] 2025-11-25 22:23:19,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 17:23:57] 2025-11-25 22:23:19,498 | INFO     | will abort loop
[2025-11-25 17:23:57] 2025-11-25 22:23:19,835 | INFO     | all job control threads have been joined
[2025-11-25 17:23:57] 2025-11-25 22:23:19,987 | INFO     | all data control threads have been joined
[2025-11-25 17:23:57] 2025-11-25 22:23:20,042 | INFO     | all payload control threads have been joined
[2025-11-25 17:23:57] 2025-11-25 22:23:20,465 | INFO     | [job] retrieve thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,465 | INFO     | [job] queue monitor thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,500 | INFO     | [job] job monitor thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,715 | INFO     | [payload] failed_post thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,829 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,840 | INFO     | [job] control thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,897 | INFO     | [job] validate thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:20,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 17:23:57] 2025-11-25 22:23:20,992 | INFO     | [data] control thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:21,048 | INFO     | [payload] control thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:21,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:21,499 | INFO     | [payload] validate_post thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:21,511 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:21,924 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:21,925 | INFO     | [data] copytool_in thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:22,964 | INFO     | [data] copytool_out thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:23,467 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 17:23:57] 2025-11-25 22:23:49,341 | INFO     | PID=7564 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 17:23:57] 2025-11-25 22:23:49,341 | INFO     | .. there are 3 such processes running
[2025-11-25 17:23:57] 2025-11-25 22:23:49,342 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 17:23:57] 2025-11-25 22:23:49,342 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 17:23:57] 2025-11-25 22:23:49,342 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 17:23:57] 2025-11-25 22:23:50,962 | INFO     | [monitor] cgroup control has ended
[2025-11-25 17:23:57] 2025-11-25 22:23:51,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547912173376)>', '<ExcThread(monitor, started 140547469588224)>']
[2025-11-25 17:23:57] 2025-11-25 22:23:52,357 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 17:23:57] 2025-11-25 22:23:52,357 | INFO     | [monitor] control thread has ended
[2025-11-25 17:23:57] 2025-11-25 22:23:56,700 | INFO     | all workflow threads have been joined
[2025-11-25 17:23:57] 2025-11-25 22:23:56,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 17:23:57] 2025-11-25 22:23:56,701 | INFO     | traces error code: 0
[2025-11-25 17:23:57] 2025-11-25 22:23:56,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 17:23:57] 2025-11-25 22:23:56,824 [wrapper] ==== pilot stdout END ====
[2025-11-25 17:23:57] 2025-11-25 22:23:56,827 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 17:23:57] 2025-11-25 22:23:56,840 [wrapper] pilotpid: 7564
[2025-11-25 17:23:57] 2025-11-25 22:23:56,843 [wrapper] Pilot exit status: 0
[2025-11-25 17:23:57] 2025-11-25 22:23:56,852 [wrapper] pandaids: 6891576573
[2025-11-25 17:23:57] 2025-11-25 22:23:56,891 [wrapper] cleanup supervisor_pilot 16306 7565
[2025-11-25 17:23:57] 2025-11-25 22:23:56,893 [wrapper] Test setup, not cleaning
[2025-11-25 17:23:57] 2025-11-25 22:23:56,896 [wrapper] apfmon messages muted
[2025-11-25 17:23:57] 2025-11-25 22:23:56,898 [wrapper] ==== wrapper stdout END ====
[2025-11-25 17:23:57] 2025-11-25 22:23:56,900 [wrapper] ==== wrapper stderr END ====
[2025-11-25 17:23:57]  *** Error codes and diagnostics ***
[2025-11-25 17:23:57]     "exeErrorCode": 0,
[2025-11-25 17:23:57]     "exeErrorDiag": "",
[2025-11-25 17:23:57]     "pilotErrorCode": 0,
[2025-11-25 17:23:57]     "pilotErrorDiag": "",
[2025-11-25 17:23:57]  *** Listing of results directory ***
[2025-11-25 17:23:57] total 1330536
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 11:24 pilot3.tar.gz
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 11:38 queuedata.json
[2025-11-25 17:23:57] -rwx------ 1 boincer umatlas     36292 Nov 18 11:39 runpilot2-wrapper.sh
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas       100 Nov 24 21:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 17:23:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 21:55 run_atlas
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas       105 Nov 24 21:55 job.xml
[2025-11-25 17:23:57] -rw-r--r-- 2 boincer umatlas 409901214 Nov 24 21:55 EVNT.47493065._000369.pool.root.1
[2025-11-25 17:23:57] -rw-r--r-- 2 boincer umatlas     15120 Nov 24 21:55 start_atlas.sh
[2025-11-25 17:23:57] drwxrwx--x 2 boincer umatlas      4096 Nov 24 21:55 shared
[2025-11-25 17:23:57] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 21:55 input.tar.gz
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas         0 Nov 24 21:55 boinc_lockfile
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas      2773 Nov 24 21:55 pandaJob.out
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas    991801 Nov 24 21:55 agis_schedconf.cvmfs.json
[2025-11-25 17:23:57] drwx------ 5 boincer umatlas      4096 Nov 24 21:55 pilot3
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas       533 Nov 25 17:13 boinc_task_state.xml
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 17:21 init_data.xml
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas 924567271 Nov 25 17:22 HITS.47493068._003682.pool.root.1
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas        95 Nov 25 17:23 pilot_heartbeat.json
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas      1070 Nov 25 17:23 memory_monitor_summary.json
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas   1516240 Nov 25 17:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas   2330781 Nov 25 17:23 log.47493068._003682.job.log.tgz.1
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas      8660 Nov 25 17:23 heartbeat.json
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas        29 Nov 25 17:23 wrapper_checkpoint.txt
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 17:23 boinc_mmap_file
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas      5006 Nov 25 17:23 pilotlog.txt
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas   9708340 Nov 25 17:23 log.47493068._003682.job.log.1
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas       353 Nov 25 17:23 output.list
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas       620 Nov 25 17:23 runtime_log
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas  12062720 Nov 25 17:23 result.tar.gz
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas       667 Nov 25 17:23 WE5MDmbudf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmErFKDmzp2mqn.diag
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas      8699 Nov 25 17:23 runtime_log.err
[2025-11-25 17:23:57] -rw-r--r-- 1 boincer umatlas     21287 Nov 25 17:23 stderr.txt
[2025-11-25 17:23:57] HITS file was successfully produced:
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas 924567271 Nov 25 17:22 shared/HITS.pool.root.1
[2025-11-25 17:23:57]  *** Contents of shared directory: ***
[2025-11-25 17:23:57] total 1315576
[2025-11-25 17:23:57] -rw-r--r-- 2 boincer umatlas 409901214 Nov 24 21:55 ATLAS.root_0
[2025-11-25 17:23:57] -rw-r--r-- 2 boincer umatlas     15120 Nov 24 21:55 start_atlas.sh
[2025-11-25 17:23:57] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 21:55 input.tar.gz
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas 924567271 Nov 25 17:22 HITS.pool.root.1
[2025-11-25 17:23:57] -rw------- 1 boincer umatlas  12062720 Nov 25 17:23 result.tar.gz
17:23:58 (3833): run_atlas exited; CPU time 541087.278365
17:23:58 (3833): called boinc_finish(0)

</stderr_txt>
]]>

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