Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:33 (871606): wrapper (7.7.26015): starting
00:03:33 (871606): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:33] Arguments: --nthreads 9
[2025-11-25 00:03:33] Threads: 9
[2025-11-25 00:03:33] Checking for CVMFS
[2025-11-25 00:03:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:34] 2.13.3.0 9366 28119 332448 153270 0 124 29549979 32935937 23256 16776704 0 189355727 99.815 89900989 33130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:34] CVMFS is ok
[2025-11-25 00:03:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:34] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:34] Checking for apptainer binary...
[2025-11-25 00:03:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:34] Running /usr/bin/apptainer --version
[2025-11-25 00:03:34] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:35] c-6-2.aglt2.org
[2025-11-25 00:03:35] apptainer works
[2025-11-25 00:03:35] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:35] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:35] Starting ATLAS job with PandaID=6895364436
[2025-11-25 00:03:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:04:47]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:04:47] 2025-11-26 02:04:12,425 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.9424500000005
[2025-11-25 21:04:47] 2025-11-26 02:04:12,449 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895364436/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:04:47] 2025-11-26 02:04:12,461 | INFO     | extracted standard info from prmon json
[2025-11-25 21:04:47] 2025-11-26 02:04:12,461 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:04:47] 2025-11-26 02:04:12,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:04:47] 2025-11-26 02:04:12,534 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:04:47] 2025-11-26 02:04:12,544 | INFO     | sum of square deviations: 588331296972.85
[2025-11-25 21:04:47] 2025-11-26 02:04:12,640 | INFO     | sum of deviations: 5063870797501.099
[2025-11-25 21:04:47] 2025-11-26 02:04:12,640 | INFO     | mean x: 1764084879.7705977
[2025-11-25 21:04:47] 2025-11-26 02:04:12,640 | INFO     | mean y: 3032158.4862681744
[2025-11-25 21:04:47] 2025-11-26 02:04:12,640 | INFO     | intersect: -15180756215.423416
[2025-11-25 21:04:47] 2025-11-26 02:04:12,646 | INFO     | chi2: 13.608685756158026
[2025-11-25 21:04:47] 2025-11-26 02:04:12,648 | INFO     | sum of square deviations: 581231820352.2437
[2025-11-25 21:04:47] 2025-11-26 02:04:12,786 | INFO     | sum of deviations: 5497751138961.858
[2025-11-25 21:04:47] 2025-11-26 02:04:12,786 | INFO     | mean x: 1764084727.2757502
[2025-11-25 21:04:47] 2025-11-26 02:04:12,787 | INFO     | mean y: 3041476.6739659365
[2025-11-25 21:04:47] 2025-11-26 02:04:12,787 | INFO     | intersect: -16683069777.055912
[2025-11-25 21:04:47] 2025-11-26 02:04:12,788 | INFO     | chi2: 10.496662266840652
[2025-11-25 21:04:47] 2025-11-26 02:04:12,788 | INFO     | current chi2=10.496662266840652 (change=22.867920863770127 %)
[2025-11-25 21:04:47] 2025-11-26 02:04:12,789 | INFO     | right removable region: 1232
[2025-11-25 21:04:47] 2025-11-26 02:04:12,793 | INFO     | sum of square deviations: 581230860822.2439
[2025-11-25 21:04:47] 2025-11-26 02:04:12,871 | INFO     | sum of deviations: 4549599893741.38
[2025-11-25 21:04:47] 2025-11-26 02:04:12,871 | INFO     | mean x: 1764085032.2757502
[2025-11-25 21:04:47] 2025-11-26 02:04:12,872 | INFO     | mean y: 3043202.334144363
[2025-11-25 21:04:47] 2025-11-26 02:04:12,872 | INFO     | intersect: -13805378917.645205
[2025-11-25 21:04:47] 2025-11-26 02:04:12,873 | INFO     | chi2: 9.581425909388448
[2025-11-25 21:04:47] 2025-11-26 02:04:12,873 | INFO     | current chi2=9.581425909388448 (change=29.59330473882986 %)
[2025-11-25 21:04:47] 2025-11-26 02:04:12,879 | INFO     | sum of square deviations: 574187774584.0742
[2025-11-25 21:04:47] 2025-11-26 02:04:12,949 | INFO     | sum of deviations: 4100106269585.1465
[2025-11-25 21:04:47] 2025-11-26 02:04:12,950 | INFO     | mean x: 1764085184.7809446
[2025-11-25 21:04:47] 2025-11-26 02:04:12,954 | INFO     | mean y: 3052934.160423453
[2025-11-25 21:04:47] 2025-11-26 02:04:12,954 | INFO     | intersect: -12593761289.970284
[2025-11-25 21:04:47] 2025-11-26 02:04:12,956 | INFO     | chi2: 6.6375822427145295
[2025-11-25 21:04:47] 2025-11-26 02:04:12,956 | INFO     | current chi2=6.6375822427145295 (change=30.72448396004781 %)
[2025-11-25 21:04:47] 2025-11-26 02:04:12,958 | INFO     | sum of square deviations: 567201805695.8365
[2025-11-25 21:04:47] 2025-11-26 02:04:12,984 | INFO     | time since job start (75590s) is within the limit (172800.0s)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,037 | INFO     | sum of deviations: 3782315657674.4463
[2025-11-25 21:04:47] 2025-11-26 02:04:13,037 | INFO     | mean x: 1764085337.2861814
[2025-11-25 21:04:47] 2025-11-26 02:04:13,037 | INFO     | mean y: 3059870.475878986
[2025-11-25 21:04:47] 2025-11-26 02:04:13,037 | INFO     | intersect: -11760526785.433823
[2025-11-25 21:04:47] 2025-11-26 02:04:13,043 | INFO     | chi2: 5.330907435329841
[2025-11-25 21:04:47] 2025-11-26 02:04:13,043 | INFO     | current chi2=5.330907435329841 (change=19.6860055303858 %)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,043 | INFO     | left removable region: 30
[2025-11-25 21:04:47] 2025-11-26 02:04:13,045 | INFO     | sum of square deviations: 538481844574.0035
[2025-11-25 21:04:47] 2025-11-26 02:04:13,152 | INFO     | sum of deviations: 4005608691107.6265
[2025-11-25 21:04:47] 2025-11-26 02:04:13,152 | INFO     | mean x: 1764085611.7920134
[2025-11-25 21:04:47] 2025-11-26 02:04:13,152 | INFO     | mean y: 3078964.7945091515
[2025-11-25 21:04:47] 2025-11-26 02:04:13,152 | INFO     | intersect: -13119437104.511688
[2025-11-25 21:04:47] 2025-11-26 02:04:13,166 | INFO     | chi2: 1.059684065754587
[2025-11-25 21:04:47] 2025-11-26 02:04:13,167 | INFO     | current memory leak: 7.44 B/s (using 1202 data points, chi2=1.06)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,168 | INFO     | could have reported an average CPU frequency of 2599 MHz (45 samples)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,168 | INFO     | ..............................
[2025-11-25 21:04:47] 2025-11-26 02:04:13,168 | INFO     | . Timing measurements:
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . get job = 0 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . initial setup = 5 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . payload setup = 25 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . stage-in = 0 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . payload execution = 75497 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . stage-out = 5 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | . log creation = 1 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,169 | INFO     | ..............................
[2025-11-25 21:04:47] 2025-11-26 02:04:13,390 | INFO     | 
[2025-11-25 21:04:47] 2025-11-26 02:04:13,391 | INFO     | job summary report
[2025-11-25 21:04:47] 2025-11-26 02:04:13,391 | INFO     | --------------------------------------------------
[2025-11-25 21:04:47] 2025-11-26 02:04:13,391 | INFO     | PanDA job id: 6895364436
[2025-11-25 21:04:47] 2025-11-26 02:04:13,404 | INFO     | task id: 47556149
[2025-11-25 21:04:47] 2025-11-26 02:04:13,404 | INFO     | errors: (none)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | pilot state: finished 
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | transexitcode: 0
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | exeerrorcode: 0
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | exeerrordiag: 
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | exitcode: 0
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | exitmsg: OK
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | cpuconsumptiontime: 301185 s
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | nevents: 1000
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | neventsw: 0
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | pid: 886372
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | pgrp: 886372
[2025-11-25 21:04:47] 2025-11-26 02:04:13,405 | INFO     | corecount: 9
[2025-11-25 21:04:47] 2025-11-26 02:04:13,406 | INFO     | event service: False
[2025-11-25 21:04:47] 2025-11-26 02:04:13,406 | INFO     | sizes: {0: 2284196, 1: 2284338, 12: 2284338, 15: 2284628, 23: 2284656, 75527: 2344819, 75528: 2344946, 75534: 2354001, 75537: 2354057, 75548: 2354303}
[2025-11-25 21:04:47] 2025-11-26 02:04:13,406 | INFO     | --------------------------------------------------
[2025-11-25 21:04:47] 2025-11-26 02:04:13,406 | INFO     | 
[2025-11-25 21:04:47] 2025-11-26 02:04:13,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 21:04:47] 2025-11-26 02:04:13,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | job 6895364436 has completed (purged errors)
[2025-11-25 21:04:47] 2025-11-26 02:04:13,500 | INFO     | overall cleanup function is called
[2025-11-25 21:04:47] 2025-11-26 02:04:14,518 | INFO     | --- collectZombieJob: --- 10, [886372]
[2025-11-25 21:04:47] 2025-11-26 02:04:14,518 | INFO     | zombie collector waiting for pid 886372
[2025-11-25 21:04:47] 2025-11-26 02:04:14,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:04:47] 2025-11-26 02:04:14,519 | INFO     | collected zombie processes
[2025-11-25 21:04:47] 2025-11-26 02:04:14,519 | INFO     | will attempt to kill all subprocesses of pid=886372
[2025-11-25 21:04:47] 2025-11-26 02:04:15,519 | INFO     | process IDs to be killed: [886372] (in reverse order)
[2025-11-25 21:04:47] 2025-11-26 02:04:15,740 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:04:47] 2025-11-26 02:04:15,741 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:04:47] 2025-11-26 02:04:15,777 | INFO     | did not find any defunct processes belonging to 886372
[2025-11-25 21:04:47] 2025-11-26 02:04:15,859 | INFO     | did not find any defunct processes belonging to 886372
[2025-11-25 21:04:47] 2025-11-26 02:04:15,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:04:47] 2025-11-26 02:04:15,889 | INFO     | ready for new job
[2025-11-25 21:04:47] 2025-11-26 02:04:15,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:04:47] 2025-11-26 02:04:15,942 | INFO     | ***************************************
[2025-11-25 21:04:47] 2025-11-26 02:04:15,943 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:04:47] 2025-11-26 02:04:15,943 | INFO     | ***************************************
[2025-11-25 21:04:47] 2025-11-26 02:04:15,943 | INFO     | 
[2025-11-25 21:04:47] 2025-11-26 02:04:15,945 | INFO     | architecture information:
[2025-11-25 21:04:47] 2025-11-26 02:04:15,956 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:04:47] 2025-11-26 02:04:15,978 | INFO     | cat /etc/os-release:
[2025-11-25 21:04:47] NAME="CentOS Linux"
[2025-11-25 21:04:47] VERSION="7 (Core)"
[2025-11-25 21:04:47] ID="centos"
[2025-11-25 21:04:47] ID_LIKE="rhel fedora"
[2025-11-25 21:04:47] VERSION_ID="7"
[2025-11-25 21:04:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:04:47] ANSI_COLOR="0;31"
[2025-11-25 21:04:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:04:47] HOME_URL="https://www.centos.org/"
[2025-11-25 21:04:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:04:47] 
[2025-11-25 21:04:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:04:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:04:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:04:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:04:47] 
[2025-11-25 21:04:47] 2025-11-26 02:04:15,979 | INFO     | ***************************************
[2025-11-25 21:04:47] 2025-11-26 02:04:16,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 21:04:47] 2025-11-26 02:04:16,533 | INFO     | sufficient remaining disk space (72107425792 B)
[2025-11-25 21:04:47] 2025-11-26 02:04:16,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:04:47] 2025-11-26 02:04:16,534 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:04:47] 2025-11-26 02:04:16,534 | INFO     | update_server=False
[2025-11-25 21:04:47] 2025-11-26 02:04:16,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:04:47] 2025-11-26 02:04:16,911 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 21:04:47] 2025-11-26 02:04:16,911 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 21:04:47] 2025-11-26 02:04:16,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:04:47] 2025-11-26 02:04:16,912 | INFO     | will abort loop
[2025-11-25 21:04:47] 2025-11-26 02:04:17,057 | INFO     | all payload control threads have been joined
[2025-11-25 21:04:47] 2025-11-26 02:04:17,254 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:04:47] 2025-11-26 02:04:17,450 | INFO     | all data control threads have been joined
[2025-11-25 21:04:47] 2025-11-26 02:04:17,541 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:17,664 | INFO     | all job control threads have been joined
[2025-11-25 21:04:47] 2025-11-26 02:04:17,665 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:17,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:04:47] 2025-11-26 02:04:17,881 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:17,882 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:17,917 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,065 | INFO     | [payload] control thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,117 | INFO     | [job] validate thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,129 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,135 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:04:47] 2025-11-26 02:04:18,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,456 | INFO     | [data] control thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,665 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:18,670 | INFO     | [job] control thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:19,261 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:19,360 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:21,860 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:04:47] 2025-11-26 02:04:23,799 [wrapper] supervise_pilot (15 min periods counter: 85)
[2025-11-25 21:04:47] 2025-11-26 02:04:35,756 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:04:47] 2025-11-26 02:04:36,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483688572736)>', '<ExcThread(monitor, started 140483196081920)>']
[2025-11-25 21:04:47] 2025-11-26 02:04:41,385 | INFO     | all workflow threads have been joined
[2025-11-25 21:04:47] 2025-11-26 02:04:41,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:04:47] 2025-11-26 02:04:41,386 | INFO     | traces error code: 0
[2025-11-25 21:04:47] 2025-11-26 02:04:41,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:04:47] 2025-11-26 02:04:47,462 | INFO     | PID=877857 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 21:04:47] 2025-11-26 02:04:47,463 | INFO     | .. there are 44 such processes running
[2025-11-25 21:04:47] 2025-11-26 02:04:47,464 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:04:47] 2025-11-26 02:04:47,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:04:47] 2025-11-26 02:04:47,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:04:47] 2025-11-26 02:04:47,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:04:47] 2025-11-26 02:04:47,464 | INFO     | [monitor] control thread has ended
[2025-11-25 21:04:47] 2025-11-26 02:04:47,739 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:04:47] 2025-11-26 02:04:47,741 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:04:47] 2025-11-26 02:04:47,744 [wrapper] pilotpid: 877857
[2025-11-25 21:04:47] 2025-11-26 02:04:47,747 [wrapper] Pilot exit status: 0
[2025-11-25 21:04:47] 2025-11-26 02:04:47,758 [wrapper] pandaids: 6895364436
[2025-11-25 21:04:47] 2025-11-26 02:04:47,842 [wrapper] cleanup supervisor_pilot 1338810 877858
[2025-11-25 21:04:47] 2025-11-26 02:04:47,846 [wrapper] Test setup, not cleaning
[2025-11-25 21:04:47] 2025-11-26 02:04:47,849 [wrapper] apfmon messages muted
[2025-11-25 21:04:47] 2025-11-26 02:04:47,852 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:04:47] 2025-11-26 02:04:47,854 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:04:47]  *** Error codes and diagnostics ***
[2025-11-25 21:04:47]     "exeErrorCode": 0,
[2025-11-25 21:04:47]     "exeErrorDiag": "",
[2025-11-25 21:04:47]     "pilotErrorCode": 0,
[2025-11-25 21:04:47]     "pilotErrorDiag": "",
[2025-11-25 21:04:47]  *** Listing of results directory ***
[2025-11-25 21:04:47] total 1319652
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 10:18 pilot3.tar.gz
[2025-11-25 21:04:47] -rwx------. 1 boincer umatlas     36292 Nov 23 10:53 runpilot2-wrapper.sh
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 10:53 queuedata.json
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:04:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 21:04:47] -rw-r--r--. 2 boincer umatlas 410977048 Nov 25 00:03 EVNT.47483658._001175.pool.root.1
[2025-11-25 21:04:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 21:04:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 21:04:47] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 00:03 input.tar.gz
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:03 pandaJob.out
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 21:04:47] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas       533 Nov 25 20:49 boinc_task_state.xml
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas      6655 Nov 25 20:56 init_data.xml
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas 911639915 Nov 25 21:03 HITS.47556149._001613.pool.root.1
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas      1070 Nov 25 21:03 memory_monitor_summary.json
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas   1516240 Nov 25 21:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas   2470894 Nov 25 21:03 log.47556149._001613.job.log.tgz.1
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas      8652 Nov 25 21:04 heartbeat.json
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 21:04 boinc_mmap_file
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas        29 Nov 25 21:04 wrapper_checkpoint.txt
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas        95 Nov 25 21:04 pilot_heartbeat.json
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas       822 Nov 25 21:04 pilotlog.txt
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas   9922458 Nov 25 21:04 log.47556149._001613.job.log.1
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas       353 Nov 25 21:04 output.list
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas       620 Nov 25 21:04 runtime_log
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas  12410880 Nov 25 21:04 result.tar.gz
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 21:04 runtime_log.err
[2025-11-25 21:04:47] -rw-------. 1 boincer umatlas       661 Nov 25 21:04 p6NMDmMaRh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml1KKDmDbW3Io.diag
[2025-11-25 21:04:47] -rw-r--r--. 1 boincer umatlas     21335 Nov 25 21:04 stderr.txt
[2025-11-25 21:04:48] HITS file was successfully produced:
[2025-11-25 21:04:48] -rw-------. 1 boincer umatlas 911639915 Nov 25 21:03 shared/HITS.pool.root.1
[2025-11-25 21:04:48]  *** Contents of shared directory: ***
[2025-11-25 21:04:48] total 1304348
[2025-11-25 21:04:48] -rw-r--r--. 2 boincer umatlas 410977048 Nov 25 00:03 ATLAS.root_0
[2025-11-25 21:04:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 21:04:48] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 00:03 input.tar.gz
[2025-11-25 21:04:48] -rw-------. 1 boincer umatlas 911639915 Nov 25 21:03 HITS.pool.root.1
[2025-11-25 21:04:48] -rw-------. 1 boincer umatlas  12410880 Nov 25 21:04 result.tar.gz
21:04:49 (871606): run_atlas exited; CPU time 302981.534414
21:04:49 (871606): called boinc_finish(0)

</stderr_txt>
]]>

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