Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:55:53 (232931): wrapper (7.7.26015): starting
20:55:53 (232931): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 20:55:53] Arguments: --nthreads 8
[2025-11-24 20:55:53] Threads: 8
[2025-11-24 20:55:53] Checking for CVMFS
[2025-11-24 20:55:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 20:55:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 20:55:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 20:55:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 20:55:53] 2.13.3.0 11314 27978 252036 153265 2 388 27947216 32935937 56307 16776704 0 205866088 99.641 201409336 33851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 20:55:53] CVMFS is ok
[2025-11-24 20:55:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 20:55:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 20:55:53] Further information can be found at the LHC@home message board.
[2025-11-24 20:55:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 20:55:53] Checking for apptainer binary...
[2025-11-24 20:55:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 20:55:53] Running /usr/bin/apptainer --version
[2025-11-24 20:55:53] apptainer version 1.4.4-1.el9
[2025-11-24 20:55:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 20:55:53] c7-2-10.aglt2.org
[2025-11-24 20:55:53] apptainer works
[2025-11-24 20:55:53] Set ATHENA_PROC_NUMBER=8
[2025-11-24 20:55:53] Set ATHENA_CORE_NUMBER=8
[2025-11-24 20:55:53] Starting ATLAS job with PandaID=6895351914
[2025-11-24 20:55:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:43:33]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:43:33] 2025-11-25 23:42:48,784 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 18:43:33] 2025-11-25 23:42:48,798 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3323.6186875
[2025-11-25 18:43:33] 2025-11-25 23:42:48,814 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895351914/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 18:43:33] 2025-11-25 23:42:48,816 | INFO     | extracted standard info from prmon json
[2025-11-25 18:43:33] 2025-11-25 23:42:48,816 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 18:43:33] 2025-11-25 23:42:48,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 18:43:33] 2025-11-25 23:42:48,832 | INFO     | fitting pss+swap vs Time
[2025-11-25 18:43:33] 2025-11-25 23:42:48,834 | INFO     | sum of square deviations: 657949848545.5432
[2025-11-25 18:43:33] 2025-11-25 23:42:48,865 | INFO     | sum of deviations: 3186459133932.3037
[2025-11-25 18:43:33] 2025-11-25 23:42:48,865 | INFO     | mean x: 1764074977.6801558
[2025-11-25 18:43:33] 2025-11-25 23:42:48,865 | INFO     | mean y: 3203550.694163424
[2025-11-25 18:43:33] 2025-11-25 23:42:48,865 | INFO     | intersect: -8540233062.288446
[2025-11-25 18:43:33] 2025-11-25 23:42:48,866 | INFO     | chi2: 9.733652664012583
[2025-11-25 18:43:33] 2025-11-25 23:42:48,867 | INFO     | sum of square deviations: 650299701903.2219
[2025-11-25 18:43:33] 2025-11-25 23:42:48,905 | INFO     | sum of deviations: 3713153113287.475
[2025-11-25 18:43:33] 2025-11-25 23:42:48,905 | INFO     | mean x: 1764074825.1828125
[2025-11-25 18:43:33] 2025-11-25 23:42:48,905 | INFO     | mean y: 3214050.621875
[2025-11-25 18:43:33] 2025-11-25 23:42:48,905 | INFO     | intersect: -10069495363.251476
[2025-11-25 18:43:33] 2025-11-25 23:42:48,906 | INFO     | chi2: 6.083339889151452
[2025-11-25 18:43:33] 2025-11-25 23:42:48,906 | INFO     | current chi2=6.083339889151452 (change=37.50198307729971 %)
[2025-11-25 18:43:33] 2025-11-25 23:42:48,907 | INFO     | sum of square deviations: 642709013425.251
[2025-11-25 18:43:33] 2025-11-25 23:42:48,937 | INFO     | sum of deviations: 3812552282126.725
[2025-11-25 18:43:33] 2025-11-25 23:42:48,937 | INFO     | mean x: 1764074672.684706
[2025-11-25 18:43:33] 2025-11-25 23:42:48,937 | INFO     | mean y: 3216042.60627451
[2025-11-25 18:43:33] 2025-11-25 23:42:48,937 | INFO     | intersect: -10461281542.922363
[2025-11-25 18:43:33] 2025-11-25 23:42:48,938 | INFO     | chi2: 5.726379477686214
[2025-11-25 18:43:33] 2025-11-25 23:42:48,938 | INFO     | current chi2=5.726379477686214 (change=5.867836056667043 %)
[2025-11-25 18:43:33] 2025-11-25 23:42:48,938 | INFO     | right removable region: 1274
[2025-11-25 18:43:33] 2025-11-25 23:42:48,939 | INFO     | sum of square deviations: 650299168763.2214
[2025-11-25 18:43:33] 2025-11-25 23:42:48,973 | INFO     | sum of deviations: 2678747810409.0986
[2025-11-25 18:43:33] 2025-11-25 23:42:48,973 | INFO     | mean x: 1764075130.1828125
[2025-11-25 18:43:33] 2025-11-25 23:42:48,973 | INFO     | mean y: 3213667.7046875
[2025-11-25 18:43:33] 2025-11-25 23:42:48,973 | INFO     | intersect: -7263460840.524535
[2025-11-25 18:43:33] 2025-11-25 23:42:48,974 | INFO     | chi2: 6.423551122656341
[2025-11-25 18:43:33] 2025-11-25 23:42:48,974 | INFO     | current chi2=6.423551122656341 (change=34.00677685566491 %)
[2025-11-25 18:43:33] 2025-11-25 23:42:48,975 | INFO     | sum of square deviations: 642708024980.8823
[2025-11-25 18:43:33] 2025-11-25 23:42:49,006 | INFO     | sum of deviations: 2380351026840.7065
[2025-11-25 18:43:33] 2025-11-25 23:42:49,006 | INFO     | mean x: 1764075282.6854901
[2025-11-25 18:43:33] 2025-11-25 23:42:49,006 | INFO     | mean y: 3219658.5678431373
[2025-11-25 18:43:33] 2025-11-25 23:42:49,006 | INFO     | intersect: -6530257826.312824
[2025-11-25 18:43:33] 2025-11-25 23:42:49,007 | INFO     | chi2: 5.28801265221072
[2025-11-25 18:43:33] 2025-11-25 23:42:49,007 | INFO     | current chi2=5.28801265221072 (change=17.677736952080796 %)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,007 | INFO     | left removable region: 20
[2025-11-25 18:43:33] 2025-11-25 23:42:49,008 | INFO     | sum of square deviations: 611471511491.2979
[2025-11-25 18:43:33] 2025-11-25 23:42:49,039 | INFO     | sum of deviations: 2653123437809.103
[2025-11-25 18:43:33] 2025-11-25 23:42:49,039 | INFO     | mean x: 1764075252.1929824
[2025-11-25 18:43:33] 2025-11-25 23:42:49,039 | INFO     | mean y: 3239406.6937799044
[2025-11-25 18:43:33] 2025-11-25 23:42:49,039 | INFO     | intersect: -7650934679.417857
[2025-11-25 18:43:33] 2025-11-25 23:42:49,040 | INFO     | chi2: 0.6622272492467163
[2025-11-25 18:43:33] 2025-11-25 23:42:49,041 | INFO     | current memory leak: 4.34 B/s (using 1254 data points, chi2=0.66)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,041 | INFO     | could have reported an average CPU frequency of 3333 MHz (47 samples)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | ..............................
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . Timing measurements:
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . get job = 0 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . initial setup = 3 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . payload setup = 12 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . stage-in = 0 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . payload execution = 78346 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . stage-out = 3 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | . log creation = 1 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,042 | INFO     | ..............................
[2025-11-25 18:43:33] 2025-11-25 23:42:49,155 | INFO     | 
[2025-11-25 18:43:33] 2025-11-25 23:42:49,155 | INFO     | job summary report
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | --------------------------------------------------
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | PanDA job id: 6895351914
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | task id: 47556137
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | errors: (none)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | pilot state: finished 
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | transexitcode: 0
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | exeerrorcode: 0
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | exeerrordiag: 
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | exitcode: 0
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | exitmsg: OK
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | cpuconsumptiontime: 189470 s
[2025-11-25 18:43:33] 2025-11-25 23:42:49,156 | INFO     | nevents: 1000
[2025-11-25 18:43:33] 2025-11-25 23:42:49,157 | INFO     | neventsw: 0
[2025-11-25 18:43:33] 2025-11-25 23:42:49,157 | INFO     | pid: 257881
[2025-11-25 18:43:33] 2025-11-25 23:42:49,157 | INFO     | pgrp: 257881
[2025-11-25 18:43:33] 2025-11-25 23:42:49,159 | INFO     | corecount: 8
[2025-11-25 18:43:33] 2025-11-25 23:42:49,159 | INFO     | event service: False
[2025-11-25 18:43:33] 2025-11-25 23:42:49,160 | INFO     | sizes: {0: 2284259, 7: 2284521, 11: 2284549, 78362: 2347395, 78368: 2356450, 78376: 2356640}
[2025-11-25 18:43:33] 2025-11-25 23:42:49,160 | INFO     | --------------------------------------------------
[2025-11-25 18:43:33] 2025-11-25 23:42:49,160 | INFO     | 
[2025-11-25 18:43:33] 2025-11-25 23:42:49,160 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 18:43:33] 2025-11-25 23:42:49,166 | INFO     | time since job start (78398s) is within the limit (172800.0s)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | job 6895351914 has completed (purged errors)
[2025-11-25 18:43:33] 2025-11-25 23:42:49,185 | INFO     | overall cleanup function is called
[2025-11-25 18:43:33] 2025-11-25 23:42:50,203 | INFO     | --- collectZombieJob: --- 10, [257881]
[2025-11-25 18:43:33] 2025-11-25 23:42:50,204 | INFO     | zombie collector waiting for pid 257881
[2025-11-25 18:43:33] 2025-11-25 23:42:50,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:43:33] 2025-11-25 23:42:50,212 | INFO     | collected zombie processes
[2025-11-25 18:43:33] 2025-11-25 23:42:50,212 | INFO     | will attempt to kill all subprocesses of pid=257881
[2025-11-25 18:43:33] 2025-11-25 23:42:51,039 | INFO     | process IDs to be killed: [257881] (in reverse order)
[2025-11-25 18:43:33] 2025-11-25 23:42:51,319 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:43:33] 2025-11-25 23:42:51,319 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:43:33] 2025-11-25 23:42:51,366 | INFO     | did not find any defunct processes belonging to 257881
[2025-11-25 18:43:33] 2025-11-25 23:42:51,402 | INFO     | did not find any defunct processes belonging to 257881
[2025-11-25 18:43:33] 2025-11-25 23:42:51,403 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:43:33] 2025-11-25 23:42:51,403 | INFO     | ready for new job
[2025-11-25 18:43:33] 2025-11-25 23:42:51,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:43:33] 2025-11-25 23:42:51,407 | INFO     | ***************************************
[2025-11-25 18:43:33] 2025-11-25 23:42:51,407 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:43:33] 2025-11-25 23:42:51,407 | INFO     | ***************************************
[2025-11-25 18:43:33] 2025-11-25 23:42:51,407 | INFO     | 
[2025-11-25 18:43:33] 2025-11-25 23:42:51,410 | INFO     | architecture information:
[2025-11-25 18:43:33] 2025-11-25 23:42:51,411 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:43:33] 2025-11-25 23:42:51,439 | INFO     | cat /etc/os-release:
[2025-11-25 18:43:33] NAME="CentOS Linux"
[2025-11-25 18:43:33] VERSION="7 (Core)"
[2025-11-25 18:43:33] ID="centos"
[2025-11-25 18:43:33] ID_LIKE="rhel fedora"
[2025-11-25 18:43:33] VERSION_ID="7"
[2025-11-25 18:43:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:43:33] ANSI_COLOR="0;31"
[2025-11-25 18:43:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:43:33] HOME_URL="https://www.centos.org/"
[2025-11-25 18:43:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:43:33] 
[2025-11-25 18:43:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:43:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:43:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:43:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:43:33] 
[2025-11-25 18:43:33] 2025-11-25 23:42:51,439 | INFO     | ***************************************
[2025-11-25 18:43:33] 2025-11-25 23:42:51,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 18:43:33] 2025-11-25 23:42:51,963 | INFO     | sufficient remaining disk space (64488472576 B)
[2025-11-25 18:43:33] 2025-11-25 23:42:51,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:43:33] 2025-11-25 23:42:51,963 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:43:33] 2025-11-25 23:42:51,963 | INFO     | update_server=False
[2025-11-25 18:43:33] 2025-11-25 23:42:51,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:43:33] 2025-11-25 23:42:51,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:43:33] 2025-11-25 23:42:51,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:43:33] 2025-11-25 23:42:52,090 | INFO     | all data control threads have been joined
[2025-11-25 18:43:33] 2025-11-25 23:42:52,279 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 18:43:33] 2025-11-25 23:42:52,279 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 18:43:33] 2025-11-25 23:42:52,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:43:33] 2025-11-25 23:42:52,279 | INFO     | will abort loop
[2025-11-25 18:43:33] 2025-11-25 23:42:52,684 | INFO     | all payload control threads have been joined
[2025-11-25 18:43:33] 2025-11-25 23:42:52,972 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,096 | INFO     | [data] control thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,284 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,347 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,385 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,411 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,570 | INFO     | all job control threads have been joined
[2025-11-25 18:43:33] 2025-11-25 23:42:53,705 | INFO     | [payload] control thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,716 | INFO     | [job] validate thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,915 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:53,977 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:54,043 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:54,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:43:33] 2025-11-25 23:42:54,212 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:54,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:54,584 | INFO     | [job] control thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:55,193 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:42:55,982 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:43:33] 2025-11-25 23:43:23,253 | INFO     | PID=238653 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 18:43:33] 2025-11-25 23:43:23,253 | INFO     | .. there are 90 such processes running
[2025-11-25 18:43:33] 2025-11-25 23:43:23,253 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:43:33] 2025-11-25 23:43:23,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:43:33] 2025-11-25 23:43:23,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:43:33] 2025-11-25 23:43:27,502 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:43:33] 2025-11-25 23:43:27,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988241536832)>', '<ExcThread(monitor, started 139987446118144)>']
[2025-11-25 18:43:33] 2025-11-25 23:43:28,280 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:43:33] 2025-11-25 23:43:28,280 | INFO     | [monitor] control thread has ended
[2025-11-25 18:43:33] 2025-11-25 23:43:32,769 | INFO     | all workflow threads have been joined
[2025-11-25 18:43:33] 2025-11-25 23:43:32,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:43:33] 2025-11-25 23:43:32,773 | INFO     | traces error code: 0
[2025-11-25 18:43:33] 2025-11-25 23:43:32,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:43:33] 2025-11-25 23:43:33,081 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:43:33] 2025-11-25 23:43:33,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:43:33] 2025-11-25 23:43:33,088 [wrapper] pilotpid: 238653
[2025-11-25 18:43:33] 2025-11-25 23:43:33,091 [wrapper] Pilot exit status: 0
[2025-11-25 18:43:33] 2025-11-25 23:43:33,109 [wrapper] pandaids: 6895351914
[2025-11-25 18:43:33] 2025-11-25 23:43:33,297 [wrapper] cleanup supervisor_pilot  101145 238654
[2025-11-25 18:43:33] 2025-11-25 23:43:33,301 [wrapper] Test setup, not cleaning
[2025-11-25 18:43:33] 2025-11-25 23:43:33,305 [wrapper] apfmon messages muted
[2025-11-25 18:43:33] 2025-11-25 23:43:33,322 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:43:33] 2025-11-25 23:43:33,341 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:43:33]  *** Error codes and diagnostics ***
[2025-11-25 18:43:33]     "exeErrorCode": 0,
[2025-11-25 18:43:33]     "exeErrorDiag": "",
[2025-11-25 18:43:33]     "pilotErrorCode": 0,
[2025-11-25 18:43:33]     "pilotErrorDiag": "",
[2025-11-25 18:43:33]  *** Listing of results directory ***
[2025-11-25 18:43:33] total 1323872
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 20:50 pilot3.tar.gz
[2025-11-25 18:43:33] -rwx------. 1 boincer umatlas     36292 Nov 22 20:57 runpilot2-wrapper.sh
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 20:57 queuedata.json
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas       100 Nov 24 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:43:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 20:55 run_atlas
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas       105 Nov 24 20:55 job.xml
[2025-11-25 18:43:33] -rw-r--r--. 2 boincer umatlas 407845819 Nov 24 20:55 EVNT.47483658._000572.pool.root.1
[2025-11-25 18:43:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 20:55 start_atlas.sh
[2025-11-25 18:43:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 20:55 shared
[2025-11-25 18:43:33] -rw-r--r--. 2 boincer umatlas    590100 Nov 24 20:55 input.tar.gz
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas         0 Nov 24 20:55 boinc_lockfile
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 20:55 pandaJob.out
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas        57 Nov 24 20:55 setup.sh.local
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas    991801 Nov 24 20:56 agis_schedconf.cvmfs.json
[2025-11-25 18:43:33] drwx------. 5 boincer umatlas      4096 Nov 24 20:56 pilot3
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas       533 Nov 25 18:33 boinc_task_state.xml
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas      6946 Nov 25 18:38 init_data.xml
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas 918864205 Nov 25 18:41 HITS.47556137._005680.pool.root.1
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas        95 Nov 25 18:42 pilot_heartbeat.json
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas      1076 Nov 25 18:42 memory_monitor_summary.json
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas   1516240 Nov 25 18:42 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas   2368231 Nov 25 18:42 log.47556137._005680.job.log.tgz.1
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas      8630 Nov 25 18:42 heartbeat.json
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas      5009 Nov 25 18:43 pilotlog.txt
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 18:43 boinc_mmap_file
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas        29 Nov 25 18:43 wrapper_checkpoint.txt
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas  10136470 Nov 25 18:43 log.47556137._005680.job.log.1
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas       353 Nov 25 18:43 output.list
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas       620 Nov 25 18:43 runtime_log
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas  12523520 Nov 25 18:43 result.tar.gz
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas      9338 Nov 25 18:43 runtime_log.err
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas       665 Nov 25 18:43 4hiNDmbXEh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFXKKDmNCibDn.diag
[2025-11-25 18:43:33] -rw-r--r--. 1 boincer umatlas     21254 Nov 25 18:43 stderr.txt
[2025-11-25 18:43:33] HITS file was successfully produced:
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas 918864205 Nov 25 18:41 shared/HITS.pool.root.1
[2025-11-25 18:43:33]  *** Contents of shared directory: ***
[2025-11-25 18:43:33] total 1308456
[2025-11-25 18:43:33] -rw-r--r--. 2 boincer umatlas 407845819 Nov 24 20:55 ATLAS.root_0
[2025-11-25 18:43:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 20:55 start_atlas.sh
[2025-11-25 18:43:33] -rw-r--r--. 2 boincer umatlas    590100 Nov 24 20:55 input.tar.gz
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas 918864205 Nov 25 18:41 HITS.pool.root.1
[2025-11-25 18:43:33] -rw-------. 1 boincer umatlas  12523520 Nov 25 18:43 result.tar.gz
18:43:35 (232931): run_atlas exited; CPU time 192450.495938
18:43:35 (232931): called boinc_finish(0)

</stderr_txt>
]]>

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