Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:56 (2286466): wrapper (7.7.26015): starting
22:37:56 (2286466): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:37:56] Arguments: --nthreads 8
[2025-11-24 22:37:56] Threads: 8
[2025-11-24 22:37:56] Checking for CVMFS
[2025-11-24 22:37:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:37:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:37:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:37:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:37:57] 2.13.3.0 9828 28035 318488 153268 1 93 25961908 32935937 21704 16776704 0 145191283 99.781 85576035 33664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 22:37:57] CVMFS is ok
[2025-11-24 22:37:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:37:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:37:57] Further information can be found at the LHC@home message board.
[2025-11-24 22:37:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:37:57] Checking for apptainer binary...
[2025-11-24 22:37:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:37:57] Running /usr/bin/apptainer --version
[2025-11-24 22:37:57] apptainer version 1.4.4-1.el9
[2025-11-24 22:37:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:37:58] c-4-39.aglt2.org
[2025-11-24 22:37:58] apptainer works
[2025-11-24 22:37:58] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:37:58] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:37:58] Starting ATLAS job with PandaID=6895365637
[2025-11-24 22:37:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:34:15]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:34:15] 2025-11-25 17:33:28,182 | INFO     | time since job start (50100s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:30,190 | INFO     | time since job start (50102s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:30,667 | INFO     | monitor loop #3119: job 0:6895365637 is in state 'finished'
[2025-11-25 12:34:15] 2025-11-25 17:33:30,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:34:15] 2025-11-25 17:33:32,203 | INFO     | time since job start (50104s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:33,184 | INFO     | monitor loop #3120: job 0:6895365637 is in state 'finished'
[2025-11-25 12:34:15] 2025-11-25 17:33:33,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:34:15] 2025-11-25 17:33:34,214 | INFO     | time since job start (50106s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:35,689 | INFO     | monitor loop #3121: job 0:6895365637 is in state 'finished'
[2025-11-25 12:34:15] 2025-11-25 17:33:35,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:34:15] 2025-11-25 17:33:36,229 | INFO     | time since job start (50108s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:38,222 | INFO     | monitor loop #3122: job 0:6895365637 is in state 'finished'
[2025-11-25 12:34:15] 2025-11-25 17:33:38,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:34:15] 2025-11-25 17:33:38,261 | INFO     | time since job start (50110s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:40,292 | INFO     | time since job start (50112s) is within the limit (172800.0s)
[2025-11-25 12:34:15] 2025-11-25 17:33:40,729 | INFO     | monitor loop #3123: job 0:6895365637 is in state 'finished'
[2025-11-25 12:34:15] 2025-11-25 17:33:40,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:34:15] 2025-11-25 17:33:40,903 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 12:34:15] 2025-11-25 17:33:40,913 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1541749999997
[2025-11-25 12:34:15] 2025-11-25 17:33:40,928 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895365637/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:34:15] 2025-11-25 17:33:40,929 | INFO     | extracted standard info from prmon json
[2025-11-25 12:34:15] 2025-11-25 17:33:40,929 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:34:15] 2025-11-25 17:33:40,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:34:15] 2025-11-25 17:33:40,962 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:34:15] 2025-11-25 17:33:40,964 | INFO     | sum of square deviations: 170972187214.95596
[2025-11-25 12:34:15] 2025-11-25 17:33:40,997 | INFO     | sum of deviations: 973699696637.0428
[2025-11-25 12:34:15] 2025-11-25 17:33:40,997 | INFO     | mean x: 1764066958.492683
[2025-11-25 12:34:15] 2025-11-25 17:33:40,998 | INFO     | mean y: 2915801.007317073
[2025-11-25 12:34:15] 2025-11-25 17:33:40,998 | INFO     | intersect: -10043580593.00677
[2025-11-25 12:34:15] 2025-11-25 17:33:40,999 | INFO     | chi2: 16.068064505809083
[2025-11-25 12:34:15] 2025-11-25 17:33:41,004 | INFO     | sum of square deviations: 167863967894.9986
[2025-11-25 12:34:15] 2025-11-25 17:33:41,037 | INFO     | sum of deviations: 1241823103698.5627
[2025-11-25 12:34:15] 2025-11-25 17:33:41,038 | INFO     | mean x: 1764066805.998773
[2025-11-25 12:34:15] 2025-11-25 17:33:41,038 | INFO     | mean y: 2928951.563190184
[2025-11-25 12:34:15] 2025-11-25 17:33:41,038 | INFO     | intersect: -13047274398.373686
[2025-11-25 12:34:15] 2025-11-25 17:33:41,041 | INFO     | chi2: 12.833089222322906
[2025-11-25 12:34:15] 2025-11-25 17:33:41,042 | INFO     | current chi2=12.833089222322906 (change=20.132949318921625 %)
[2025-11-25 12:34:15] 2025-11-25 17:33:41,042 | INFO     | right removable region: 814
[2025-11-25 12:34:15] 2025-11-25 17:33:41,047 | INFO     | sum of square deviations: 167863471354.99854
[2025-11-25 12:34:15] 2025-11-25 17:33:41,095 | INFO     | sum of deviations: 702536895839.4861
[2025-11-25 12:34:15] 2025-11-25 17:33:41,095 | INFO     | mean x: 1764067110.998773
[2025-11-25 12:34:15] 2025-11-25 17:33:41,095 | INFO     | mean y: 2929093.4883435583
[2025-11-25 12:34:15] 2025-11-25 17:33:41,095 | INFO     | intersect: -7379988835.050637
[2025-11-25 12:34:15] 2025-11-25 17:33:41,096 | INFO     | chi2: 13.391164420432911
[2025-11-25 12:34:15] 2025-11-25 17:33:41,097 | INFO     | current chi2=13.391164420432911 (change=16.659754411667894 %)
[2025-11-25 12:34:15] 2025-11-25 17:33:41,097 | INFO     | left removable region: 10
[2025-11-25 12:34:15] 2025-11-25 17:33:41,106 | INFO     | sum of square deviations: 161158394594.99478
[2025-11-25 12:34:15] 2025-11-25 17:33:41,146 | INFO     | sum of deviations: 962308576865.1338
[2025-11-25 12:34:15] 2025-11-25 17:33:41,146 | INFO     | mean x: 1764067080.5024877
[2025-11-25 12:34:15] 2025-11-25 17:33:41,146 | INFO     | mean y: 2947874.182835821
[2025-11-25 12:34:15] 2025-11-25 17:33:41,154 | INFO     | intersect: -10530644781.65827
[2025-11-25 12:34:15] 2025-11-25 17:33:41,156 | INFO     | chi2: 9.517559436968156
[2025-11-25 12:34:15] 2025-11-25 17:33:41,156 | INFO     | current memory leak: 5.97 B/s (using 804 data points, chi2=9.52)
[2025-11-25 12:34:15] 2025-11-25 17:33:41,157 | INFO     | could have reported an average CPU frequency of 2600 MHz (31 samples)
[2025-11-25 12:34:15] 2025-11-25 17:33:41,157 | INFO     | ..............................
[2025-11-25 12:34:15] 2025-11-25 17:33:41,158 | INFO     | . Timing measurements:
[2025-11-25 12:34:15] 2025-11-25 17:33:41,158 | INFO     | . get job = 0 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,158 | INFO     | . initial setup = 3 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,158 | INFO     | . payload setup = 22 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,158 | INFO     | . stage-in = 0 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,158 | INFO     | . payload execution = 50006 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,167 | INFO     | . stage-out = 9 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,167 | INFO     | . log creation = 1 s
[2025-11-25 12:34:15] 2025-11-25 17:33:41,167 | INFO     | ..............................
[2025-11-25 12:34:15] 2025-11-25 17:33:42,052 | INFO     | 
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | job summary report
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | --------------------------------------------------
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | PanDA job id: 6895365637
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | task id: 47556137
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | errors: (none)
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:34:15] 2025-11-25 17:33:42,053 | INFO     | pilot state: finished 
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | transexitcode: 0
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | exeerrorcode: 0
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | exeerrordiag: 
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | exitcode: 0
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | exitmsg: OK
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | cpuconsumptiontime: 288625 s
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | nevents: 1000
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | neventsw: 0
[2025-11-25 12:34:15] 2025-11-25 17:33:42,054 | INFO     | pid: 2299049
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | pgrp: 2299049
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | corecount: 8
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | event service: False
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | sizes: {0: 2283431, 1: 2284287, 2: 2284287, 12: 2284315, 17: 2284605, 23: 2284633, 50033: 2333350, 50034: 2333349, 50044: 2342404, 50045: 2342460, 50077: 2342706}
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | --------------------------------------------------
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | 
[2025-11-25 12:34:15] 2025-11-25 17:33:42,055 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 12:34:15] 2025-11-25 17:33:42,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,195 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:34:15] 2025-11-25 17:33:42,196 | INFO     | job 6895365637 has completed (purged errors)
[2025-11-25 12:34:15] 2025-11-25 17:33:42,196 | INFO     | overall cleanup function is called
[2025-11-25 12:34:15] 2025-11-25 17:33:43,302 | INFO     | --- collectZombieJob: --- 10, [2299049]
[2025-11-25 12:34:15] 2025-11-25 17:33:43,303 | INFO     | zombie collector waiting for pid 2299049
[2025-11-25 12:34:15] 2025-11-25 17:33:43,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:34:15] 2025-11-25 17:33:43,303 | INFO     | collected zombie processes
[2025-11-25 12:34:15] 2025-11-25 17:33:43,303 | INFO     | will attempt to kill all subprocesses of pid=2299049
[2025-11-25 12:34:15] 2025-11-25 17:33:45,951 | INFO     | process IDs to be killed: [2299049] (in reverse order)
[2025-11-25 12:34:15] 2025-11-25 17:33:46,239 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:34:15] 2025-11-25 17:33:46,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:34:15] 2025-11-25 17:33:46,274 | INFO     | did not find any defunct processes belonging to 2299049
[2025-11-25 12:34:15] 2025-11-25 17:33:46,340 | INFO     | did not find any defunct processes belonging to 2299049
[2025-11-25 12:34:15] 2025-11-25 17:33:46,353 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:34:15] 2025-11-25 17:33:46,353 | INFO     | ready for new job
[2025-11-25 12:34:15] 2025-11-25 17:33:46,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:34:15] 2025-11-25 17:33:46,374 | INFO     | ***************************************
[2025-11-25 12:34:15] 2025-11-25 17:33:46,375 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:34:15] 2025-11-25 17:33:46,375 | INFO     | ***************************************
[2025-11-25 12:34:15] 2025-11-25 17:33:46,375 | INFO     | 
[2025-11-25 12:34:15] 2025-11-25 17:33:46,377 | INFO     | architecture information:
[2025-11-25 12:34:15] 2025-11-25 17:33:46,393 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:34:15] 2025-11-25 17:33:46,443 | INFO     | cat /etc/os-release:
[2025-11-25 12:34:15] NAME="CentOS Linux"
[2025-11-25 12:34:15] VERSION="7 (Core)"
[2025-11-25 12:34:15] ID="centos"
[2025-11-25 12:34:15] ID_LIKE="rhel fedora"
[2025-11-25 12:34:15] VERSION_ID="7"
[2025-11-25 12:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:34:15] ANSI_COLOR="0;31"
[2025-11-25 12:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:34:15] HOME_URL="https://www.centos.org/"
[2025-11-25 12:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:34:15] 
[2025-11-25 12:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:34:15] 
[2025-11-25 12:34:15] 2025-11-25 17:33:46,443 | INFO     | ***************************************
[2025-11-25 12:34:15] 2025-11-25 17:33:46,947 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 12:34:15] 2025-11-25 17:33:47,007 | INFO     | sufficient remaining disk space (71386005504 B)
[2025-11-25 12:34:15] 2025-11-25 17:33:47,007 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:34:15] 2025-11-25 17:33:47,008 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:34:15] 2025-11-25 17:33:47,008 | INFO     | update_server=False
[2025-11-25 12:34:15] 2025-11-25 17:33:47,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:34:15] 2025-11-25 17:33:47,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:34:15] 2025-11-25 17:33:47,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:34:15] 2025-11-25 17:33:47,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:34:15] 2025-11-25 17:33:47,010 | INFO     | aborting loop
[2025-11-25 12:34:15] 2025-11-25 17:33:47,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:34:15] 2025-11-25 17:33:47,204 | INFO     | all payload control threads have been joined
[2025-11-25 12:34:15] 2025-11-25 17:33:48,014 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,014 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,016 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,100 | INFO     | all data control threads have been joined
[2025-11-25 12:34:15] 2025-11-25 17:33:48,210 | INFO     | [payload] control thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,326 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,328 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,400 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,557 | INFO     | all job control threads have been joined
[2025-11-25 12:34:15] 2025-11-25 17:33:48,714 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,715 | INFO     | [job] validate thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,716 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:48,816 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:49,029 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:49,107 | INFO     | [data] control thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:49,244 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:49,565 | INFO     | [job] control thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:51,018 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:34:15] 2025-11-25 17:33:56,096 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:34:15] 2025-11-25 17:33:56,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140120180544)>', '<ExcThread(monitor, started 140139388978944)>']
[2025-11-25 12:34:15] 2025-11-25 17:34:01,810 | INFO     | all workflow threads have been joined
[2025-11-25 12:34:15] 2025-11-25 17:34:01,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:34:15] 2025-11-25 17:34:01,811 | INFO     | traces error code: 0
[2025-11-25 12:34:15] 2025-11-25 17:34:01,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:34:15] 2025-11-25 17:34:14,841 | INFO     | PID=2290282 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 12:34:15] 2025-11-25 17:34:14,842 | INFO     | .. there are 42 such processes running
[2025-11-25 12:34:15] 2025-11-25 17:34:14,842 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:34:15] 2025-11-25 17:34:14,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:34:15] 2025-11-25 17:34:14,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:34:15] 2025-11-25 17:34:14,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:34:15] 2025-11-25 17:34:14,842 | INFO     | [monitor] control thread has ended
[2025-11-25 12:34:15] 2025-11-25 17:34:15,152 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:34:15] 2025-11-25 17:34:15,187 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:34:15] 2025-11-25 17:34:15,201 [wrapper] pilotpid: 2290282
[2025-11-25 12:34:15] 2025-11-25 17:34:15,248 [wrapper] Pilot exit status: 0
[2025-11-25 12:34:15] 2025-11-25 17:34:15,335 [wrapper] pandaids: 6895365637
[2025-11-25 12:34:15] 2025-11-25 17:34:15,416 [wrapper] cleanup supervisor_pilot  641406 2290283
[2025-11-25 12:34:15] 2025-11-25 17:34:15,420 [wrapper] Test setup, not cleaning
[2025-11-25 12:34:15] 2025-11-25 17:34:15,423 [wrapper] apfmon messages muted
[2025-11-25 12:34:15] 2025-11-25 17:34:15,426 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:34:15] 2025-11-25 17:34:15,428 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:34:15]  *** Error codes and diagnostics ***
[2025-11-25 12:34:15]     "exeErrorCode": 0,
[2025-11-25 12:34:15]     "exeErrorDiag": "",
[2025-11-25 12:34:15]     "pilotErrorCode": 0,
[2025-11-25 12:34:15]     "pilotErrorDiag": "",
[2025-11-25 12:34:15]  *** Listing of results directory ***
[2025-11-25 12:34:15] total 1303656
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-25 12:34:15] -rwx------. 1 boincer umatlas     36292 Nov 23 12:27 runpilot2-wrapper.sh
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 12:27 queuedata.json
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas       100 Nov 24 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:34:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 22:37 run_atlas
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas       105 Nov 24 22:37 job.xml
[2025-11-25 12:34:15] -rw-r--r--. 2 boincer umatlas 409789666 Nov 24 22:37 EVNT.47483658._000826.pool.root.1
[2025-11-25 12:34:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:37 start_atlas.sh
[2025-11-25 12:34:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 22:37 shared
[2025-11-25 12:34:15] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 22:37 input.tar.gz
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas         0 Nov 24 22:37 boinc_lockfile
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 22:37 pandaJob.out
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas        57 Nov 24 22:37 setup.sh.local
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas    991801 Nov 24 22:38 agis_schedconf.cvmfs.json
[2025-11-25 12:34:15] drwx------. 5 boincer umatlas      4096 Nov 24 22:38 pilot3
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas       533 Nov 25 12:03 boinc_task_state.xml
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas 904234066 Nov 25 12:31 HITS.47556137._008126.pool.root.1
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas      6659 Nov 25 12:32 init_data.xml
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas      1057 Nov 25 12:32 memory_monitor_summary.json
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas   1516240 Nov 25 12:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas   2022089 Nov 25 12:33 log.47556137._008126.job.log.tgz.1
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas        95 Nov 25 12:33 pilot_heartbeat.json
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas      8626 Nov 25 12:33 heartbeat.json
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas        29 Nov 25 12:34 wrapper_checkpoint.txt
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas       823 Nov 25 12:34 pilotlog.txt
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 12:34 boinc_mmap_file
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas   6480444 Nov 25 12:34 log.47556137._008126.job.log.1
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas       353 Nov 25 12:34 output.list
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas       620 Nov 25 12:34 runtime_log
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas   8519680 Nov 25 12:34 result.tar.gz
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 12:34 runtime_log.err
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas       658 Nov 25 12:34 4fIMDmh2Sh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFfIKDmfYVpwn.diag
[2025-11-25 12:34:15] -rw-r--r--. 1 boincer umatlas     21811 Nov 25 12:34 stderr.txt
[2025-11-25 12:34:15] HITS file was successfully produced:
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas 904234066 Nov 25 12:31 shared/HITS.pool.root.1
[2025-11-25 12:34:15]  *** Contents of shared directory: ***
[2025-11-25 12:34:15] total 1292152
[2025-11-25 12:34:15] -rw-r--r--. 2 boincer umatlas 409789666 Nov 24 22:37 ATLAS.root_0
[2025-11-25 12:34:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:37 start_atlas.sh
[2025-11-25 12:34:15] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 22:37 input.tar.gz
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas 904234066 Nov 25 12:31 HITS.pool.root.1
[2025-11-25 12:34:15] -rw-------. 1 boincer umatlas   8519680 Nov 25 12:34 result.tar.gz
12:34:16 (2286466): run_atlas exited; CPU time 290225.515404
12:34:16 (2286466): called boinc_finish(0)

</stderr_txt>
]]>

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