Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:53:30 (23087): wrapper (7.7.26015): starting
20:53:30 (23087): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 20:53:30] Arguments: --nthreads 8
[2025-11-24 20:53:30] Threads: 8
[2025-11-24 20:53:30] Checking for CVMFS
[2025-11-24 20:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 20:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 20:53:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 20:53:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 20:53:31] 2.11.2.0 2856 142644 82224 153265 2 82 14862271 20275201 1 130560 0 52427741 99.953 5690476 33781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 20:53:31] CVMFS is ok
[2025-11-24 20:53:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 20:53:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 20:53:31] Further information can be found at the LHC@home message board.
[2025-11-24 20:53:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 20:53:31] Checking for apptainer binary...
[2025-11-24 20:53:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 20:53:31] Running /usr/bin/apptainer --version
[2025-11-24 20:53:31] apptainer version 1.3.2-1.el7
[2025-11-24 20:53:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 20:53:33] c-115-6.aglt2.org
[2025-11-24 20:53:33] apptainer works
[2025-11-24 20:53:33] Set ATHENA_PROC_NUMBER=8
[2025-11-24 20:53:33] Set ATHENA_CORE_NUMBER=8
[2025-11-24 20:53:33] Starting ATLAS job with PandaID=6895381195
[2025-11-24 20:53:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:56:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:56:01] 2025-11-25 12:54:59,932 | INFO     | time since job start (39669s) is within the limit (172800.0s)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,033 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 07:56:01] 2025-11-25 12:55:00,037 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-25 07:56:01] 2025-11-25 12:55:00,039 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895381195/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,040 | INFO     | extracted standard info from prmon json
[2025-11-25 07:56:01] 2025-11-25 12:55:00,040 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 07:56:01] 2025-11-25 12:55:00,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:56:01] 2025-11-25 12:55:00,052 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:56:01] 2025-11-25 12:55:00,053 | INFO     | sum of square deviations: 85156579259.29837
[2025-11-25 07:56:01] 2025-11-25 12:55:00,061 | INFO     | sum of deviations: 658767565648.641
[2025-11-25 07:56:01] 2025-11-25 12:55:00,061 | INFO     | mean x: 1764055456.1015384
[2025-11-25 07:56:01] 2025-11-25 12:55:00,061 | INFO     | mean y: 3218881.96
[2025-11-25 07:56:01] 2025-11-25 12:55:00,062 | INFO     | intersect: -13643436826.77459
[2025-11-25 07:56:01] 2025-11-25 12:55:00,062 | INFO     | chi2: 5.737743241465536
[2025-11-25 07:56:01] 2025-11-25 12:55:00,063 | INFO     | sum of square deviations: 83206624739.9754
[2025-11-25 07:56:01] 2025-11-25 12:55:00,071 | INFO     | sum of deviations: 892338390531.4089
[2025-11-25 07:56:01] 2025-11-25 12:55:00,071 | INFO     | mean x: 1764055303.6062016
[2025-11-25 07:56:01] 2025-11-25 12:55:00,071 | INFO     | mean y: 3237141.8480620156
[2025-11-25 07:56:01] 2025-11-25 12:55:00,071 | INFO     | intersect: -18915139554.08928
[2025-11-25 07:56:01] 2025-11-25 12:55:00,072 | INFO     | chi2: 2.794354226466907
[2025-11-25 07:56:01] 2025-11-25 12:55:00,072 | INFO     | current chi2=2.794354226466907 (change=51.29872305416768 %)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,073 | INFO     | sum of square deviations: 81286631560.34375
[2025-11-25 07:56:01] 2025-11-25 12:55:00,081 | INFO     | sum of deviations: 931566058529.0625
[2025-11-25 07:56:01] 2025-11-25 12:55:00,081 | INFO     | mean x: 1764055151.109375
[2025-11-25 07:56:01] 2025-11-25 12:55:00,081 | INFO     | mean y: 3240241.45625
[2025-11-25 07:56:01] 2025-11-25 12:55:00,081 | INFO     | intersect: -20213293186.022644
[2025-11-25 07:56:01] 2025-11-25 12:55:00,082 | INFO     | chi2: 2.5391904795248
[2025-11-25 07:56:01] 2025-11-25 12:55:00,082 | INFO     | current chi2=2.5391904795248 (change=9.13140304565924 %)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,082 | INFO     | right removable region: 639
[2025-11-25 07:56:01] 2025-11-25 12:55:00,083 | INFO     | sum of square deviations: 83206386229.97537
[2025-11-25 07:56:01] 2025-11-25 12:55:00,091 | INFO     | sum of deviations: 454607831419.3134
[2025-11-25 07:56:01] 2025-11-25 12:55:00,091 | INFO     | mean x: 1764055608.6062016
[2025-11-25 07:56:01] 2025-11-25 12:55:00,091 | INFO     | mean y: 3234816.2217054265
[2025-11-25 07:56:01] 2025-11-25 12:55:00,092 | INFO     | intersect: -9634889504.128073
[2025-11-25 07:56:01] 2025-11-25 12:55:00,092 | INFO     | chi2: 3.3356559976260667
[2025-11-25 07:56:01] 2025-11-25 12:55:00,092 | INFO     | current chi2=3.3356559976260667 (change=41.86466948329196 %)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,093 | INFO     | sum of square deviations: 81286232986.34375
[2025-11-25 07:56:01] 2025-11-25 12:55:00,101 | INFO     | sum of deviations: 416390577400.28125
[2025-11-25 07:56:01] 2025-11-25 12:55:00,101 | INFO     | mean x: 1764055761.109375
[2025-11-25 07:56:01] 2025-11-25 12:55:00,101 | INFO     | mean y: 3237848.453125
[2025-11-25 07:56:01] 2025-11-25 12:55:00,101 | INFO     | intersect: -9033177912.848408
[2025-11-25 07:56:01] 2025-11-25 12:55:00,102 | INFO     | chi2: 3.2986543626940468
[2025-11-25 07:56:01] 2025-11-25 12:55:00,102 | INFO     | current chi2=3.2986543626940468 (change=1.1092761051605258 %)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,102 | INFO     | left removable region: 20
[2025-11-25 07:56:01] 2025-11-25 12:55:00,103 | INFO     | sum of square deviations: 73544383941.78346
[2025-11-25 07:56:01] 2025-11-25 12:55:00,110 | INFO     | sum of deviations: 649231104223.7201
[2025-11-25 07:56:01] 2025-11-25 12:55:00,111 | INFO     | mean x: 1764055730.6203554
[2025-11-25 07:56:01] 2025-11-25 12:55:00,111 | INFO     | mean y: 3262801.815831987
[2025-11-25 07:56:01] 2025-11-25 12:55:00,111 | INFO     | intersect: -15569372231.872389
[2025-11-25 07:56:01] 2025-11-25 12:55:00,112 | INFO     | chi2: 0.06757738040210101
[2025-11-25 07:56:01] 2025-11-25 12:55:00,112 | INFO     | current memory leak: 8.83 B/s (using 619 data points, chi2=0.07)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,112 | INFO     | could have reported an average CPU frequency of 2396 MHz (25 samples)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,112 | INFO     | ..............................
[2025-11-25 07:56:01] 2025-11-25 12:55:00,112 | INFO     | . Timing measurements:
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . get job = 0 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . initial setup = 2 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . payload setup = 8 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . stage-in = 0 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . payload execution = 39629 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . stage-out = 3 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | . log creation = 0 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,113 | INFO     | ..............................
[2025-11-25 07:56:01] 2025-11-25 12:55:00,200 | INFO     | 
[2025-11-25 07:56:01] 2025-11-25 12:55:00,201 | INFO     | job summary report
[2025-11-25 07:56:01] 2025-11-25 12:55:00,201 | INFO     | --------------------------------------------------
[2025-11-25 07:56:01] 2025-11-25 12:55:00,201 | INFO     | PanDA job id: 6895381195
[2025-11-25 07:56:01] 2025-11-25 12:55:00,201 | INFO     | task id: 47556137
[2025-11-25 07:56:01] 2025-11-25 12:55:00,202 | INFO     | errors: (none)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,202 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:56:01] 2025-11-25 12:55:00,202 | INFO     | pilot state: finished 
[2025-11-25 07:56:01] 2025-11-25 12:55:00,202 | INFO     | transexitcode: 0
[2025-11-25 07:56:01] 2025-11-25 12:55:00,202 | INFO     | exeerrorcode: 0
[2025-11-25 07:56:01] 2025-11-25 12:55:00,203 | INFO     | exeerrordiag: 
[2025-11-25 07:56:01] 2025-11-25 12:55:00,203 | INFO     | exitcode: 0
[2025-11-25 07:56:01] 2025-11-25 12:55:00,203 | INFO     | exitmsg: OK
[2025-11-25 07:56:01] 2025-11-25 12:55:00,203 | INFO     | cpuconsumptiontime: 308266 s
[2025-11-25 07:56:01] 2025-11-25 12:55:00,203 | INFO     | nevents: 1000
[2025-11-25 07:56:01] 2025-11-25 12:55:00,204 | INFO     | neventsw: 0
[2025-11-25 07:56:01] 2025-11-25 12:55:00,204 | INFO     | pid: 760
[2025-11-25 07:56:01] 2025-11-25 12:55:00,204 | INFO     | pgrp: 760
[2025-11-25 07:56:01] 2025-11-25 12:55:00,204 | INFO     | corecount: 8
[2025-11-25 07:56:01] 2025-11-25 12:55:00,204 | INFO     | event service: False
[2025-11-25 07:56:01] 2025-11-25 12:55:00,205 | INFO     | sizes: {0: 2283431, 1: 2284287, 7: 2284549, 12: 2284577, 39642: 2327997, 39643: 2327996, 39646: 2337235, 39653: 2337489}
[2025-11-25 07:56:01] 2025-11-25 12:55:00,205 | INFO     | --------------------------------------------------
[2025-11-25 07:56:01] 2025-11-25 12:55:00,205 | INFO     | 
[2025-11-25 07:56:01] 2025-11-25 12:55:00,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 07:56:01] 2025-11-25 12:55:00,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:56:01] 2025-11-25 12:55:00,237 | INFO     | job 6895381195 has completed (purged errors)
[2025-11-25 07:56:01] 2025-11-25 12:55:00,237 | INFO     | overall cleanup function is called
[2025-11-25 07:56:01] 2025-11-25 12:55:01,255 | INFO     | --- collectZombieJob: --- 10, [760]
[2025-11-25 07:56:01] 2025-11-25 12:55:01,255 | INFO     | zombie collector waiting for pid 760
[2025-11-25 07:56:01] 2025-11-25 12:55:01,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:56:01] 2025-11-25 12:55:01,256 | INFO     | collected zombie processes
[2025-11-25 07:56:01] 2025-11-25 12:55:01,256 | INFO     | will attempt to kill all subprocesses of pid=760
[2025-11-25 07:56:01] 2025-11-25 12:55:01,349 | INFO     | process IDs to be killed: [760] (in reverse order)
[2025-11-25 07:56:01] 2025-11-25 12:55:01,405 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:56:01] 2025-11-25 12:55:01,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:56:01] 2025-11-25 12:55:01,410 | INFO     | did not find any defunct processes belonging to 760
[2025-11-25 07:56:01] 2025-11-25 12:55:01,413 | INFO     | did not find any defunct processes belonging to 760
[2025-11-25 07:56:01] 2025-11-25 12:55:01,416 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:56:01] 2025-11-25 12:55:01,416 | INFO     | ready for new job
[2025-11-25 07:56:01] 2025-11-25 12:55:01,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:56:01] 2025-11-25 12:55:01,420 | INFO     | ***************************************
[2025-11-25 07:56:01] 2025-11-25 12:55:01,420 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:56:01] 2025-11-25 12:55:01,420 | INFO     | ***************************************
[2025-11-25 07:56:01] 2025-11-25 12:55:01,421 | INFO     | 
[2025-11-25 07:56:01] 2025-11-25 12:55:01,421 | INFO     | architecture information:
[2025-11-25 07:56:01] 2025-11-25 12:55:01,422 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:56:01] 2025-11-25 12:55:01,442 | INFO     | cat /etc/os-release:
[2025-11-25 07:56:01] NAME="CentOS Linux"
[2025-11-25 07:56:01] VERSION="7 (Core)"
[2025-11-25 07:56:01] ID="centos"
[2025-11-25 07:56:01] ID_LIKE="rhel fedora"
[2025-11-25 07:56:01] VERSION_ID="7"
[2025-11-25 07:56:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:56:01] ANSI_COLOR="0;31"
[2025-11-25 07:56:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:56:01] HOME_URL="https://www.centos.org/"
[2025-11-25 07:56:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:56:01] 
[2025-11-25 07:56:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:56:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:56:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:56:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:56:01] 
[2025-11-25 07:56:01] 2025-11-25 12:55:01,443 | INFO     | ***************************************
[2025-11-25 07:56:01] 2025-11-25 12:55:01,945 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 07:56:01] 2025-11-25 12:55:01,965 | INFO     | sufficient remaining disk space (17476616192 B)
[2025-11-25 07:56:01] 2025-11-25 12:55:01,965 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:56:01] 2025-11-25 12:55:01,966 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:56:01] 2025-11-25 12:55:01,966 | INFO     | update_server=False
[2025-11-25 07:56:01] 2025-11-25 12:55:01,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:56:01] 2025-11-25 12:55:01,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:56:01] 2025-11-25 12:55:01,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:56:01] 2025-11-25 12:55:02,131 | INFO     | all data control threads have been joined
[2025-11-25 07:56:01] 2025-11-25 12:55:02,264 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 07:56:01] 2025-11-25 12:55:02,265 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 07:56:01] 2025-11-25 12:55:02,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:56:01] 2025-11-25 12:55:02,265 | INFO     | will abort loop
[2025-11-25 07:56:01] 2025-11-25 12:55:02,969 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:02,972 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,064 | INFO     | [job] validate thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,124 | INFO     | all payload control threads have been joined
[2025-11-25 07:56:01] 2025-11-25 12:55:03,133 | INFO     | [data] control thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,212 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,266 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,335 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,350 | INFO     | all job control threads have been joined
[2025-11-25 07:56:01] 2025-11-25 12:55:03,406 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,462 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,791 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:56:01] 2025-11-25 12:55:03,855 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:03,973 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:04,129 | INFO     | [payload] control thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:04,355 | INFO     | [job] control thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:07,835 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:12,423 | INFO     | job.realtimelogging is not enabled
[2025-11-25 07:56:01] 2025-11-25 12:55:13,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:56:01] 2025-11-25 12:55:33,125 | INFO     | PID=26783 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 07:56:01] 2025-11-25 12:55:33,126 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:56:01] 2025-11-25 12:55:33,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:56:01] 2025-11-25 12:55:33,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:56:01] 2025-11-25 12:55:55,463 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:56:01] 2025-11-25 12:55:56,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341129987904)>', '<ExcThread(monitor, started 140340363241216)>']
[2025-11-25 07:56:01] 2025-11-25 12:55:56,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:56:01] 2025-11-25 12:55:56,226 | INFO     | [monitor] control thread has ended
[2025-11-25 07:56:01] 2025-11-25 12:56:01,201 | INFO     | all workflow threads have been joined
[2025-11-25 07:56:01] 2025-11-25 12:56:01,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:56:01] 2025-11-25 12:56:01,205 | INFO     | traces error code: 0
[2025-11-25 07:56:01] 2025-11-25 12:56:01,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:56:01] 2025-11-25 12:56:01,320 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:56:01] 2025-11-25 12:56:01,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:56:01] 2025-11-25 12:56:01,330 [wrapper] pilotpid: 26783
[2025-11-25 07:56:01] 2025-11-25 12:56:01,334 [wrapper] Pilot exit status: 0
[2025-11-25 07:56:01] 2025-11-25 12:56:01,350 [wrapper] pandaids: 6895381195
[2025-11-25 07:56:01] 2025-11-25 12:56:01,403 [wrapper] cleanup supervisor_pilot 30238 26784
[2025-11-25 07:56:01] 2025-11-25 12:56:01,408 [wrapper] Test setup, not cleaning
[2025-11-25 07:56:01] 2025-11-25 12:56:01,413 [wrapper] apfmon messages muted
[2025-11-25 07:56:01] 2025-11-25 12:56:01,417 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:56:01] 2025-11-25 12:56:01,421 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:56:01]  *** Error codes and diagnostics ***
[2025-11-25 07:56:01]     "exeErrorCode": 0,
[2025-11-25 07:56:01]     "exeErrorDiag": "",
[2025-11-25 07:56:01]     "pilotErrorCode": 0,
[2025-11-25 07:56:01]     "pilotErrorDiag": "",
[2025-11-25 07:56:01]  *** Listing of results directory ***
[2025-11-25 07:56:01] total 1306804
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 21:53 pilot3.tar.gz
[2025-11-25 07:56:01] -rwx------ 1 boincer umatlas     36292 Nov 23 22:12 runpilot2-wrapper.sh
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 22:12 queuedata.json
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas       100 Nov 24 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:56:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 20:53 run_atlas
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas       105 Nov 24 20:53 job.xml
[2025-11-25 07:56:01] -rw-r--r-- 2 boincer umatlas 408688077 Nov 24 20:53 EVNT.47483658._000993.pool.root.1
[2025-11-25 07:56:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 20:53 start_atlas.sh
[2025-11-25 07:56:01] drwxrwx--x 2 boincer umatlas      4096 Nov 24 20:53 shared
[2025-11-25 07:56:01] -rw-r--r-- 2 boincer umatlas    590097 Nov 24 20:53 input.tar.gz
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas         0 Nov 24 20:53 boinc_lockfile
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 20:53 pandaJob.out
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas        57 Nov 24 20:53 setup.sh.local
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas    991801 Nov 24 20:53 agis_schedconf.cvmfs.json
[2025-11-25 07:56:01] drwx------ 5 boincer umatlas      4096 Nov 24 20:53 pilot3
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas      5911 Nov 25 07:45 init_data.xml
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas       533 Nov 25 07:46 boinc_task_state.xml
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas 910823869 Nov 25 07:54 HITS.47556137._009799.pool.root.1
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas      1064 Nov 25 07:54 memory_monitor_summary.json
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas   1516240 Nov 25 07:54 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas   1910157 Nov 25 07:54 log.47556137._009799.job.log.tgz.1
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas      8654 Nov 25 07:55 heartbeat.json
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas        95 Nov 25 07:55 pilot_heartbeat.json
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas      5004 Nov 25 07:56 pilotlog.txt
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 07:56 boinc_mmap_file
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas        29 Nov 25 07:56 wrapper_checkpoint.txt
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas   5457911 Nov 25 07:56 log.47556137._009799.job.log.1
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas       353 Nov 25 07:56 output.list
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas       620 Nov 25 07:56 runtime_log
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas   7383040 Nov 25 07:56 result.tar.gz
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas       666 Nov 25 07:56 PkVKDmOBch8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjNLKDmdIBSlm.diag
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 07:56 runtime_log.err
[2025-11-25 07:56:01] -rw-r--r-- 1 boincer umatlas     21216 Nov 25 07:56 stderr.txt
[2025-11-25 07:56:01] HITS file was successfully produced:
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas 910823869 Nov 25 07:54 shared/HITS.pool.root.1
[2025-11-25 07:56:01]  *** Contents of shared directory: ***
[2025-11-25 07:56:01] total 1296404
[2025-11-25 07:56:01] -rw-r--r-- 2 boincer umatlas 408688077 Nov 24 20:53 ATLAS.root_0
[2025-11-25 07:56:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 20:53 start_atlas.sh
[2025-11-25 07:56:01] -rw-r--r-- 2 boincer umatlas    590097 Nov 24 20:53 input.tar.gz
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas 910823869 Nov 25 07:54 HITS.pool.root.1
[2025-11-25 07:56:01] -rw------- 1 boincer umatlas   7383040 Nov 25 07:56 result.tar.gz
07:56:03 (23087): run_atlas exited; CPU time 306395.617531
07:56:03 (23087): called boinc_finish(0)

</stderr_txt>
]]>

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