Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:58:22 (1453525): wrapper (7.7.26015): starting
15:58:22 (1453525): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 15:58:22] Arguments: --nthreads 3
[2025-11-27 15:58:22] Threads: 3
[2025-11-27 15:58:22] Checking for CVMFS
[2025-11-27 15:58:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:58:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:58:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:58:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:58:22] 2.9.2.0 3943730 12760 95132 153368 3 81 30457607 36864000 0 130560 0 4726040 99.942 621099 3384 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 15:58:22] CVMFS is ok
[2025-11-27 15:58:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:58:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:58:22] Further information can be found at the LHC@home message board.
[2025-11-27 15:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:58:22] Checking for apptainer binary...
[2025-11-27 15:58:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:58:22] Running /usr/bin/apptainer --version
[2025-11-27 15:58:22] apptainer version 1.4.1-1.1
[2025-11-27 15:58:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:58:22] thA331a
[2025-11-27 15:58:22] apptainer works
[2025-11-27 15:58:22] Set ATHENA_PROC_NUMBER=3
[2025-11-27 15:58:22] Set ATHENA_CORE_NUMBER=3
[2025-11-27 15:58:22] Starting ATLAS job with PandaID=6895380354
[2025-11-27 15:58:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:56:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:56:14] 2025-11-27 22:55:44,768 | INFO     | all job control threads have been joined
[2025-11-27 23:56:14] 2025-11-27 22:55:44,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:56:14] 2025-11-27 22:55:44,775 | INFO     | aborting loop
[2025-11-27 23:56:14] 2025-11-27 22:55:45,059 | INFO     | all payload control threads have been joined
[2025-11-27 23:56:14] 2025-11-27 22:55:45,580 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:45,580 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:45,665 | INFO     | all data control threads have been joined
[2025-11-27 23:56:14] 2025-11-27 22:55:45,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:56:14] 2025-11-27 22:55:45,774 | INFO     | [job] control thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:45,780 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:45,894 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,017 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,065 | INFO     | [payload] control thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,362 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,471 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,577 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,671 | INFO     | [data] control thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:46,897 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:47,048 | INFO     | [job] validate thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:47,050 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:55:49,687 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:56:14] 2025-11-27 22:56:00,585 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:56:14] 2025-11-27 22:56:01,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761595324224)>', '<ExcThread(monitor, started 139761113097984)>']
[2025-11-27 23:56:14] 2025-11-27 22:56:06,172 | INFO     | all workflow threads have been joined
[2025-11-27 23:56:14] 2025-11-27 22:56:06,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:56:14] 2025-11-27 22:56:06,173 | INFO     | traces error code: 0
[2025-11-27 23:56:14] 2025-11-27 22:56:06,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:56:14] 2025-11-27 22:56:14,596 | INFO     | PID=1457245 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:56:14] 2025-11-27 22:56:14,596 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:56:14] 2025-11-27 22:56:14,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:56:14] 2025-11-27 22:56:14,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:56:14] 2025-11-27 22:56:14,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:56:14] 2025-11-27 22:56:14,596 | INFO     | [monitor] control thread has ended
[2025-11-27 23:56:14] 2025-11-27 22:56:14,642 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:56:14] 2025-11-27 22:56:14,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:56:14] 2025-11-27 22:56:14,647 [wrapper] pilotpid: 1457245
[2025-11-27 23:56:14] 2025-11-27 22:56:14,649 [wrapper] Pilot exit status: 0
[2025-11-27 23:56:14] 2025-11-27 22:56:14,656 [wrapper] pandaids: 6895380354
[2025-11-27 23:56:14] 2025-11-27 22:56:14,672 [wrapper] cleanup supervisor_pilot 1513110 1457246
[2025-11-27 23:56:14] 2025-11-27 22:56:14,674 [wrapper] Test setup, not cleaning
[2025-11-27 23:56:14] 2025-11-27 22:56:14,676 [wrapper] apfmon messages muted
[2025-11-27 23:56:14] 2025-11-27 22:56:14,679 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:56:14] 2025-11-27 22:56:14,681 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:56:14]  *** Error codes and diagnostics ***
[2025-11-27 23:56:14]     "exeErrorCode": 0,
[2025-11-27 23:56:14]     "exeErrorDiag": "",
[2025-11-27 23:56:14]     "pilotErrorCode": 0,
[2025-11-27 23:56:14]     "pilotErrorDiag": "",
[2025-11-27 23:56:14]  *** Listing of results directory ***
[2025-11-27 23:56:14] total 1300688
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-27 23:56:14] -rwx------ 1 boinc boinc     36292 Nov 24 03:48 runpilot2-wrapper.sh
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc      5112 Nov 24 03:48 queuedata.json
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc       100 Nov 27 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:56:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 15:58 run_atlas
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc       105 Nov 27 15:58 job.xml
[2025-11-27 23:56:14] -rw-r--r-- 2 boinc boinc 411737402 Nov 27 15:58 EVNT.47483658._000987.pool.root.1
[2025-11-27 23:56:14] -rw-r--r-- 2 boinc boinc    611283 Nov 27 15:58 input.tar.gz
[2025-11-27 23:56:14] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:58 start_atlas.sh
[2025-11-27 23:56:14] drwxrwx--x 2 boinc boinc      4096 Nov 27 15:58 shared
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:58 boinc_setup_complete
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc      6442 Nov 27 15:58 init_data.xml
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:58 boinc_lockfile
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc      2785 Nov 27 15:58 pandaJob.out
[2025-11-27 23:56:14] -rw------- 1 boinc boinc    991580 Nov 27 15:58 agis_schedconf.cvmfs.json
[2025-11-27 23:56:14] drwx------ 7 boinc boinc      4096 Nov 27 15:58 pilot3
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc       531 Nov 27 23:51 boinc_task_state.xml
[2025-11-27 23:56:14] -rw------- 1 boinc boinc 905821297 Nov 27 23:55 HITS.47556137._009738.pool.root.1
[2025-11-27 23:56:14] -rw------- 1 boinc boinc      1024 Nov 27 23:55 memory_monitor_summary.json
[2025-11-27 23:56:14] -rw------- 1 boinc boinc   1516240 Nov 27 23:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:56:14] -rw------- 1 boinc boinc   1167340 Nov 27 23:55 log.47556137._009738.job.log.tgz.1
[2025-11-27 23:56:14] -rw------- 1 boinc boinc      8565 Nov 27 23:55 heartbeat.json
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc      8192 Nov 27 23:55 boinc_mmap_file
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc        28 Nov 27 23:55 wrapper_checkpoint.txt
[2025-11-27 23:56:14] -rw------- 1 boinc boinc       747 Nov 27 23:56 pilotlog.txt
[2025-11-27 23:56:14] -rw------- 1 boinc boinc        95 Nov 27 23:56 pilot_heartbeat.json
[2025-11-27 23:56:14] -rw------- 1 boinc boinc   4034606 Nov 27 23:56 log.47556137._009738.job.log.1
[2025-11-27 23:56:14] -rw------- 1 boinc boinc       353 Nov 27 23:56 output.list
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc       620 Nov 27 23:56 runtime_log
[2025-11-27 23:56:14] -rw------- 1 boinc boinc   5222400 Nov 27 23:56 result.tar.gz
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc      8903 Nov 27 23:56 runtime_log.err
[2025-11-27 23:56:14] -rw------- 1 boinc boinc       666 Nov 27 23:56 GCYLDmknbh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbMLKDmbLP2Co.diag
[2025-11-27 23:56:14] -rw-r--r-- 1 boinc boinc      6939 Nov 27 23:56 stderr.txt
[2025-11-27 23:56:14] HITS file was successfully produced:
[2025-11-27 23:56:14] -rw------- 1 boinc boinc 905821297 Nov 27 23:55 shared/HITS.pool.root.1
[2025-11-27 23:56:14]  *** Contents of shared directory: ***
[2025-11-27 23:56:14] total 1292404
[2025-11-27 23:56:14] -rw-r--r-- 2 boinc boinc 411737402 Nov 27 15:58 ATLAS.root_0
[2025-11-27 23:56:14] -rw-r--r-- 2 boinc boinc    611283 Nov 27 15:58 input.tar.gz
[2025-11-27 23:56:14] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:58 start_atlas.sh
[2025-11-27 23:56:14] -rw------- 1 boinc boinc 905821297 Nov 27 23:55 HITS.pool.root.1
[2025-11-27 23:56:14] -rw------- 1 boinc boinc   5222400 Nov 27 23:56 result.tar.gz
23:56:16 (1453525): run_atlas exited; CPU time 84495.499437
23:56:16 (1453525): called boinc_finish(0)

</stderr_txt>
]]>

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