Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
10:11:15 (2529273): wrapper (7.7.26015): starting
10:11:15 (2529273): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:11:15] Arguments: --nthreads 8
[2025-11-26 10:11:15] Threads: 8
[2025-11-26 10:11:15] Checking for CVMFS
[2025-11-26 10:11:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:11:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:11:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:11:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:11:15] 2.12.7.0 3613689 6384 54016 153315 3 253 5135261 6144000 2802 130560 1 20997232 99.973 695324 677 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 10:11:15] CVMFS is ok
[2025-11-26 10:11:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:11:15] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 10:11:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 10:11:15] Further information can be found at the LHC@home message board.
[2025-11-26 10:11:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:11:15] Checking for apptainer binary...
[2025-11-26 10:11:15] apptainer is not installed, using version from CVMFS
[2025-11-26 10:11:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:11:16] biggy
[2025-11-26 10:11:16] apptainer works
[2025-11-26 10:11:16] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:11:16] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:11:16] Starting ATLAS job with PandaID=6895355173
[2025-11-26 10:11:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:45:48]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:45:48] 2025-11-26 12:44:53,801 | INFO     | time since job start (12812s) is within the limit (172800.0s)
[2025-11-26 13:45:48] 2025-11-26 12:44:54,229 | INFO     | monitor loop #956: job 0:6895355173 is in state 'finished'
[2025-11-26 13:45:48] 2025-11-26 12:44:54,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,467 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 13:45:48] 2025-11-26 12:44:55,470 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5158.388656250001
[2025-11-26 13:45:48] 2025-11-26 12:44:55,472 | INFO     | using path: /single_8TB/boinc-client/slots/2/PanDA_Pilot-6895355173/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,473 | INFO     | extracted standard info from prmon json
[2025-11-26 13:45:48] 2025-11-26 12:44:55,473 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:45:48] 2025-11-26 12:44:55,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:45:48] 2025-11-26 12:44:55,474 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:45:48] 2025-11-26 12:44:55,475 | INFO     | sum of square deviations: 2871616632.5
[2025-11-26 13:45:48] 2025-11-26 12:44:55,475 | INFO     | sum of deviations: 103915524803.50002
[2025-11-26 13:45:48] 2025-11-26 12:44:55,475 | INFO     | mean x: 1764154674.5
[2025-11-26 13:45:48] 2025-11-26 12:44:55,475 | INFO     | mean y: 2861803.776190476
[2025-11-26 13:45:48] 2025-11-26 12:44:55,475 | INFO     | intersect: -63836808422.54371
[2025-11-26 13:45:48] 2025-11-26 12:44:55,475 | INFO     | chi2: 3.116274607942006
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | sum of square deviations: 2671343110.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | sum of deviations: 133127384357.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | mean x: 1764154522.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | mean y: 2883723.302439024
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | intersect: -87914417590.8794
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | chi2: 1.8452121195944007
[2025-11-26 13:45:48] 2025-11-26 12:44:55,476 | INFO     | current chi2=1.8452121195944007 (change=40.78788451788648 %)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | sum of square deviations: 2480604650.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | sum of deviations: 122297999456.99998
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | mean x: 1764154369.5
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | mean y: 2875063.67
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | intersect: -86972915344.19493
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | chi2: 1.8422117970282872
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | current chi2=1.8422117970282872 (change=0.1626004151096187 %)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | right removable region: 199
[2025-11-26 13:45:48] 2025-11-26 12:44:55,477 | INFO     | sum of square deviations: 2671343110.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | sum of deviations: 57347446880.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | mean x: 1764154827.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | mean y: 2896964.326829268
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | intersect: -37869353459.34791
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | chi2: 1.362246207027947
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | current chi2=1.362246207027947 (change=56.286066588734386 %)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,478 | INFO     | sum of square deviations: 2480604650.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | sum of deviations: 47789398604.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | mean x: 1764154979.5
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | mean y: 2904596.52
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | intersect: -33983932247.697376
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | chi2: 1.3481216381036538
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | current chi2=1.3481216381036538 (change=1.0368587448747058 %)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | left removable region: 20
[2025-11-26 13:45:48] 2025-11-26 12:44:55,479 | INFO     | sum of square deviations: 1778377530.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | sum of deviations: 53065249868.999985
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | mean x: 1764154949.0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | mean y: 2931873.9888268155
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | intersect: -52637928459.14748
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | chi2: 0.034803081088010945
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | current memory leak: 29.84 B/s (using 179 data points, chi2=0.03)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | could have reported an average CPU frequency of 5110 MHz (11 samples)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,480 | INFO     | ..............................
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . Timing measurements:
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . get job = 0 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . initial setup = 1 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . payload setup = 2 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . stage-in = 0 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . payload execution = 12786 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . stage-out = 3 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | . log creation = 0 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,481 | INFO     | ..............................
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | 
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | job summary report
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | --------------------------------------------------
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | PanDA job id: 6895355173
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | task id: 47556149
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | errors: (none)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | pilot state: finished 
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | transexitcode: 0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | exeerrorcode: 0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | exeerrordiag: 
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | exitcode: 0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | exitmsg: OK
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | cpuconsumptiontime: 98553 s
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | nevents: 1000
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | neventsw: 0
[2025-11-26 13:45:48] 2025-11-26 12:44:55,651 | INFO     | pid: 2539786
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | pgrp: 2539786
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | corecount: 8
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | event service: False
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | sizes: {0: 2284223, 3: 2284485, 11: 2284513, 12793: 2315714, 12794: 2315713, 12798: 2324783, 12799: 2324967, 12801: 2325213}
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | --------------------------------------------------
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | 
[2025-11-26 13:45:48] 2025-11-26 12:44:55,652 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/2
[2025-11-26 13:45:48] 2025-11-26 12:44:55,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | job 6895355173 has completed (purged errors)
[2025-11-26 13:45:48] 2025-11-26 12:44:55,665 | INFO     | overall cleanup function is called
[2025-11-26 13:45:48] 2025-11-26 12:44:56,678 | INFO     | --- collectZombieJob: --- 10, [2539786]
[2025-11-26 13:45:48] 2025-11-26 12:44:56,679 | INFO     | zombie collector waiting for pid 2539786
[2025-11-26 13:45:48] 2025-11-26 12:44:56,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:45:48] 2025-11-26 12:44:56,679 | INFO     | collected zombie processes
[2025-11-26 13:45:48] 2025-11-26 12:44:56,679 | INFO     | will attempt to kill all subprocesses of pid=2539786
[2025-11-26 13:45:48] 2025-11-26 12:44:56,792 | INFO     | process IDs to be killed: [2539786] (in reverse order)
[2025-11-26 13:45:48] 2025-11-26 12:44:56,848 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:45:48] 2025-11-26 12:44:56,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:45:48] 2025-11-26 12:44:56,853 | INFO     | did not find any defunct processes belonging to 2539786
[2025-11-26 13:45:48] 2025-11-26 12:44:56,856 | INFO     | did not find any defunct processes belonging to 2539786
[2025-11-26 13:45:48] 2025-11-26 12:44:56,857 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:45:48] 2025-11-26 12:44:56,857 | INFO     | ready for new job
[2025-11-26 13:45:48] 2025-11-26 12:44:56,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:45:48] 2025-11-26 12:44:56,858 | INFO     | ***************************************
[2025-11-26 13:45:48] 2025-11-26 12:44:56,858 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:45:48] 2025-11-26 12:44:56,858 | INFO     | ***************************************
[2025-11-26 13:45:48] 2025-11-26 12:44:56,858 | INFO     | 
[2025-11-26 13:45:48] 2025-11-26 12:44:56,859 | INFO     | architecture information:
[2025-11-26 13:45:48] 2025-11-26 12:44:56,860 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:45:48] 2025-11-26 12:44:56,870 | INFO     | cat /etc/os-release:
[2025-11-26 13:45:48] NAME="CentOS Linux"
[2025-11-26 13:45:48] VERSION="7 (Core)"
[2025-11-26 13:45:48] ID="centos"
[2025-11-26 13:45:48] ID_LIKE="rhel fedora"
[2025-11-26 13:45:48] VERSION_ID="7"
[2025-11-26 13:45:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:45:48] ANSI_COLOR="0;31"
[2025-11-26 13:45:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:45:48] HOME_URL="https://www.centos.org/"
[2025-11-26 13:45:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:45:48] 
[2025-11-26 13:45:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:45:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:45:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:45:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:45:48] 
[2025-11-26 13:45:48] 2025-11-26 12:44:56,870 | INFO     | ***************************************
[2025-11-26 13:45:48] 2025-11-26 12:44:57,372 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/2
[2025-11-26 13:45:48] 2025-11-26 12:44:57,383 | INFO     | sufficient remaining disk space (954306920448 B)
[2025-11-26 13:45:48] 2025-11-26 12:44:57,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:45:48] 2025-11-26 12:44:57,383 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:45:48] 2025-11-26 12:44:57,383 | INFO     | update_server=False
[2025-11-26 13:45:48] 2025-11-26 12:44:57,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:45:48] 2025-11-26 12:44:57,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:45:48] 2025-11-26 12:44:57,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:45:48] 2025-11-26 12:44:57,737 | INFO     | aborting loop
[2025-11-26 13:45:48] 2025-11-26 12:44:57,863 | INFO     | all job control threads have been joined
[2025-11-26 13:45:48] 2025-11-26 12:44:58,005 | INFO     | all data control threads have been joined
[2025-11-26 13:45:48] 2025-11-26 12:44:58,167 | INFO     | all payload control threads have been joined
[2025-11-26 13:45:48] 2025-11-26 12:44:58,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:45:48] 2025-11-26 12:44:58,388 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:58,389 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:58,557 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:58,660 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:58,742 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:58,868 | INFO     | [job] control thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:58,963 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,010 | INFO     | [data] control thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,054 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,173 | INFO     | [payload] control thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,394 | INFO     | [job] validate thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:45:48] 2025-11-26 12:44:59,730 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,801 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:44:59,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:45:00,249 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:45:03,411 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:45:48] 2025-11-26 12:45:27,010 | INFO     | PID=2533116 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 13:45:48] 2025-11-26 12:45:27,010 | INFO     | .. there are 4 such processes running
[2025-11-26 13:45:48] 2025-11-26 12:45:27,010 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:45:48] 2025-11-26 12:45:27,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:45:48] 2025-11-26 12:45:27,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:45:48] 2025-11-26 12:45:42,300 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:45:48] 2025-11-26 12:45:43,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135689011271488)>', '<ExcThread(monitor, started 135687814772480)>']
[2025-11-26 13:45:48] 2025-11-26 12:45:44,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:45:48] 2025-11-26 12:45:44,086 | INFO     | [monitor] control thread has ended
[2025-11-26 13:45:48] 2025-11-26 12:45:48,602 | INFO     | all workflow threads have been joined
[2025-11-26 13:45:48] 2025-11-26 12:45:48,602 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:45:48] 2025-11-26 12:45:48,602 | INFO     | traces error code: 0
[2025-11-26 13:45:48] 2025-11-26 12:45:48,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:45:48] 2025-11-26 12:45:48,675 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:45:48] 2025-11-26 12:45:48,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:45:48] 2025-11-26 12:45:48,678 [wrapper] pilotpid: 2533116
[2025-11-26 13:45:48] 2025-11-26 12:45:48,679 [wrapper] Pilot exit status: 0
[2025-11-26 13:45:48] 2025-11-26 12:45:48,685 [wrapper] pandaids: 6895355173
[2025-11-26 13:45:48] 2025-11-26 12:45:48,722 [wrapper] cleanup supervisor_pilot 2751388 2533117
[2025-11-26 13:45:48] 2025-11-26 12:45:48,724 [wrapper] Test setup, not cleaning
[2025-11-26 13:45:48] 2025-11-26 12:45:48,725 [wrapper] apfmon messages muted
[2025-11-26 13:45:48] 2025-11-26 12:45:48,727 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:45:48] 2025-11-26 12:45:48,728 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:45:48]  *** Error codes and diagnostics ***
[2025-11-26 13:45:48]     "exeErrorCode": 0,
[2025-11-26 13:45:48]     "exeErrorDiag": "",
[2025-11-26 13:45:48]     "pilotErrorCode": 0,
[2025-11-26 13:45:48]     "pilotErrorDiag": "",
[2025-11-26 13:45:48]  *** Listing of results directory ***
[2025-11-26 13:45:48] total 1317600
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc    576529 Nov 23 07:03 pilot3.tar.gz
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc      5112 Nov 23 07:47 queuedata.json
[2025-11-26 13:45:48] -rwx------ 1 boinc boinc     36292 Nov 23 07:47 runpilot2-wrapper.sh
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc       105 Nov 26 10:11 job.xml
[2025-11-26 13:45:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 10:11 run_atlas
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc       100 Nov 26 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:45:48] -rw-r--r-- 2 boinc boinc 409376782 Nov 26 10:11 EVNT.47483658._001144.pool.root.1
[2025-11-26 13:45:48] -rw-r--r-- 2 boinc boinc    590102 Nov 26 10:11 input.tar.gz
[2025-11-26 13:45:48] drwxrwx--x 2 boinc boinc         5 Nov 26 10:11 shared
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:11 boinc_setup_complete
[2025-11-26 13:45:48] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:11 start_atlas.sh
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc      6806 Nov 26 10:11 init_data.xml
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:11 boinc_lockfile
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc      2784 Nov 26 10:11 pandaJob.out
[2025-11-26 13:45:48] -rw------- 1 boinc boinc    991877 Nov 26 10:11 agis_schedconf.cvmfs.json
[2025-11-26 13:45:48] drwx------ 5 boinc boinc        22 Nov 26 10:11 pilot3
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc       531 Nov 26 13:41 boinc_task_state.xml
[2025-11-26 13:45:48] -rw------- 1 boinc boinc 931391057 Nov 26 13:44 HITS.47556149._001305.pool.root.1
[2025-11-26 13:45:48] -rw------- 1 boinc boinc      1063 Nov 26 13:44 memory_monitor_summary.json
[2025-11-26 13:45:48] -rw------- 1 boinc boinc   1516240 Nov 26 13:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:45:48] -rw------- 1 boinc boinc   1539273 Nov 26 13:44 log.47556149._001305.job.log.tgz.1
[2025-11-26 13:45:48] -rw------- 1 boinc boinc      8593 Nov 26 13:44 heartbeat.json
[2025-11-26 13:45:48] -rw------- 1 boinc boinc        95 Nov 26 13:45 pilot_heartbeat.json
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc      8192 Nov 26 13:45 boinc_mmap_file
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc        28 Nov 26 13:45 wrapper_checkpoint.txt
[2025-11-26 13:45:48] -rw------- 1 boinc boinc      4834 Nov 26 13:45 pilotlog.txt
[2025-11-26 13:45:48] -rw------- 1 boinc boinc   1881676 Nov 26 13:45 log.47556149._001305.job.log.1
[2025-11-26 13:45:48] -rw------- 1 boinc boinc       353 Nov 26 13:45 output.list
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc       620 Nov 26 13:45 runtime_log
[2025-11-26 13:45:48] -rw------- 1 boinc boinc   3440640 Nov 26 13:45 result.tar.gz
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc      8940 Nov 26 13:45 runtime_log.err
[2025-11-26 13:45:48] -rw------- 1 boinc boinc       659 Nov 26 13:45 SmuLDmc3Ih8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnSIKDmlxaCKn.diag
[2025-11-26 13:45:48] -rw-r--r-- 1 boinc boinc     21355 Nov 26 13:45 stderr.txt
[2025-11-26 13:45:48] HITS file was successfully produced:
[2025-11-26 13:45:48] -rw------- 1 boinc boinc 931391057 Nov 26 13:44 shared/HITS.pool.root.1
[2025-11-26 13:45:48]  *** Contents of shared directory: ***
[2025-11-26 13:45:48] total 1310960
[2025-11-26 13:45:48] -rw-r--r-- 2 boinc boinc 409376782 Nov 26 10:11 ATLAS.root_0
[2025-11-26 13:45:48] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:11 start_atlas.sh
[2025-11-26 13:45:48] -rw-r--r-- 2 boinc boinc    590102 Nov 26 10:11 input.tar.gz
[2025-11-26 13:45:48] -rw------- 1 boinc boinc 931391057 Nov 26 13:44 HITS.pool.root.1
[2025-11-26 13:45:48] -rw------- 1 boinc boinc   3440640 Nov 26 13:45 result.tar.gz
13:45:49 (2529273): run_atlas exited; CPU time 98459.515656
13:45:49 (2529273): called boinc_finish(0)

</stderr_txt>
]]>

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