Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:25:42 (892791): wrapper (7.7.26015): starting
00:25:42 (892791): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:25:42] Arguments: --nthreads 8
[2025-11-25 00:25:42] Threads: 8
[2025-11-25 00:25:42] Checking for CVMFS
[2025-11-25 00:25:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:25:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:25:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:25:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:25:42] 2.13.2.0 3460 683 64848 153275 1 89 3584382 4096000 3256 130560 0 2459752 99.551 863722 1091 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 00:25:42] CVMFS is ok
[2025-11-25 00:25:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:25:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 00:25:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 00:25:42] Further information can be found at the LHC@home message board.
[2025-11-25 00:25:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:25:42] Checking for apptainer binary...
[2025-11-25 00:25:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:25:42] Running /usr/bin/apptainer --version
[2025-11-25 00:25:42] apptainer version 1.4.3
[2025-11-25 00:25:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:25:42] painter
[2025-11-25 00:25:42] apptainer works
[2025-11-25 00:25:42] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:25:42] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:25:42] Starting ATLAS job with PandaID=6895353833
[2025-11-25 00:25:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:51:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:51:23] 2025-11-25 11:50:20,912 | INFO     | time since job start (15868s) is within the limit (172800.0s)
[2025-11-25 04:51:23] 2025-11-25 11:50:21,794 | INFO     | monitor loop #1194: job 0:6895353833 is in state 'finished'
[2025-11-25 04:51:23] 2025-11-25 11:50:21,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,375 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 04:51:23] 2025-11-25 11:50:22,377 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3699.145718750001
[2025-11-25 04:51:23] 2025-11-25 11:50:22,379 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6895353833/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,379 | INFO     | extracted standard info from prmon json
[2025-11-25 04:51:23] 2025-11-25 11:50:22,379 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:51:23] 2025-11-25 11:50:22,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:51:23] 2025-11-25 11:50:22,380 | INFO     | fitting pss+swap vs Time
[2025-11-25 04:51:23] 2025-11-25 11:50:22,380 | INFO     | sum of square deviations: 5449781095.784658
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | sum of deviations: 154348562686.4308
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | mean x: 1764063470.7076924
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | mean y: 2835320.8346153847
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | intersect: -49958925785.85915
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | chi2: 4.202264360491759
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | sum of square deviations: 5141382480.564679
[2025-11-25 04:51:23] 2025-11-25 11:50:22,381 | INFO     | sum of deviations: 190069462618.74124
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | mean x: 1764063318.2117648
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | mean y: 2852778.1529411767
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | intersect: -65212012714.81816
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | chi2: 2.9475306473457152
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | current chi2=2.9475306473457152 (change=29.85851449381951 %)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | sum of square deviations: 4844844552.836021
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | sum of deviations: 183370694636.06003
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | mean x: 1764063165.716
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | mean y: 2849332.86
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | intersect: -66764512251.50215
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | chi2: 2.9474836658922228
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | current chi2=2.9474836658922228 (change=0.0015939258692619406 %)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | right removable region: 249
[2025-11-25 04:51:23] 2025-11-25 11:50:22,382 | INFO     | sum of square deviations: 5141349540.564679
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | sum of deviations: 70531381357.34119
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | mean x: 1764063623.2117648
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | mean y: 2876691.7529411763
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | intersect: -24197353844.157413
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | chi2: 1.3560749956737788
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | current chi2=1.3560749956737788 (change=67.72989799444488 %)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,383 | INFO     | sum of square deviations: 4844778672.836021
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | sum of deviations: 55544088546.17202
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | mean x: 1764063775.716
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | mean y: 2884376.932
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | intersect: -20221633846.953526
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | chi2: 1.3047804959844937
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | current chi2=1.3047804959844937 (change=3.7825710121436797 %)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | left removable region: 20
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | sum of square deviations: 3723523733.2663856
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | sum of deviations: 71304866974.70308
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | mean x: 1764063745.235808
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | mean y: 2909508.524017467
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | intersect: -33778621025.348064
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | chi2: 0.007563868683833214
[2025-11-25 04:51:23] 2025-11-25 11:50:22,384 | INFO     | current memory leak: 19.15 B/s (using 229 data points, chi2=0.01)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | could have reported an average CPU frequency of 4586 MHz (12 samples)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | ..............................
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . Timing measurements:
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . get job = 0 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . initial setup = 5 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . payload setup = 2 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . stage-in = 0 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . payload execution = 15841 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . stage-out = 2 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | . log creation = 0 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,385 | INFO     | ..............................
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | 
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | job summary report
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | --------------------------------------------------
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | PanDA job id: 6895353833
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | task id: 47556137
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | errors: (none)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | pilot state: finished 
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | transexitcode: 0
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | exeerrorcode: 0
[2025-11-25 04:51:23] 2025-11-25 11:50:22,719 | INFO     | exeerrordiag: 
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | exitcode: 0
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | exitmsg: OK
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | cpuconsumptiontime: 104822 s
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | nevents: 1000
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | neventsw: 0
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | pid: 903296
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | pgrp: 903296
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | corecount: 8
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | event service: False
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | sizes: {0: 2284260, 3: 2284522, 11: 2284550, 15847: 2316974, 15848: 2316973, 15851: 2326042, 15852: 2326226, 15857: 2326472}
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | --------------------------------------------------
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | 
[2025-11-25 04:51:23] 2025-11-25 11:50:22,720 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | job 6895353833 has completed (purged errors)
[2025-11-25 04:51:23] 2025-11-25 11:50:22,728 | INFO     | overall cleanup function is called
[2025-11-25 04:51:23] 2025-11-25 11:50:23,735 | INFO     | --- collectZombieJob: --- 10, [903296]
[2025-11-25 04:51:23] 2025-11-25 11:50:23,735 | INFO     | zombie collector waiting for pid 903296
[2025-11-25 04:51:23] 2025-11-25 11:50:23,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:51:23] 2025-11-25 11:50:23,735 | INFO     | collected zombie processes
[2025-11-25 04:51:23] 2025-11-25 11:50:23,735 | INFO     | will attempt to kill all subprocesses of pid=903296
[2025-11-25 04:51:23] 2025-11-25 11:50:23,777 | INFO     | process IDs to be killed: [903296] (in reverse order)
[2025-11-25 04:51:23] 2025-11-25 11:50:23,799 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:51:23] 2025-11-25 11:50:23,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:51:23] 2025-11-25 11:50:23,800 | INFO     | did not find any defunct processes belonging to 903296
[2025-11-25 04:51:23] 2025-11-25 11:50:23,802 | INFO     | did not find any defunct processes belonging to 903296
[2025-11-25 04:51:23] 2025-11-25 11:50:23,802 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:51:23] 2025-11-25 11:50:23,802 | INFO     | ready for new job
[2025-11-25 04:51:23] 2025-11-25 11:50:23,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:51:23] 2025-11-25 11:50:23,803 | INFO     | ***************************************
[2025-11-25 04:51:23] 2025-11-25 11:50:23,803 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:51:23] 2025-11-25 11:50:23,803 | INFO     | ***************************************
[2025-11-25 04:51:23] 2025-11-25 11:50:23,803 | INFO     | 
[2025-11-25 04:51:23] 2025-11-25 11:50:23,804 | INFO     | architecture information:
[2025-11-25 04:51:23] 2025-11-25 11:50:23,804 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:51:23] 2025-11-25 11:50:23,810 | INFO     | cat /etc/os-release:
[2025-11-25 04:51:23] NAME="CentOS Linux"
[2025-11-25 04:51:23] VERSION="7 (Core)"
[2025-11-25 04:51:23] ID="centos"
[2025-11-25 04:51:23] ID_LIKE="rhel fedora"
[2025-11-25 04:51:23] VERSION_ID="7"
[2025-11-25 04:51:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:51:23] ANSI_COLOR="0;31"
[2025-11-25 04:51:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:51:23] HOME_URL="https://www.centos.org/"
[2025-11-25 04:51:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:51:23] 
[2025-11-25 04:51:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:51:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:51:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:51:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:51:23] 
[2025-11-25 04:51:23] 2025-11-25 11:50:23,810 | INFO     | ***************************************
[2025-11-25 04:51:23] 2025-11-25 11:50:24,313 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | INFO     | sufficient remaining disk space (338508644352 B)
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | INFO     | update_server=False
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:51:23] 2025-11-25 11:50:24,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:51:23] 2025-11-25 11:50:24,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:51:23] 2025-11-25 11:50:24,661 | INFO     | all data control threads have been joined
[2025-11-25 04:51:23] 2025-11-25 11:50:25,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:51:23] 2025-11-25 11:50:25,302 | INFO     | aborting loop
[2025-11-25 04:51:23] 2025-11-25 11:50:25,324 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,324 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,344 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,493 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,501 | INFO     | all payload control threads have been joined
[2025-11-25 04:51:23] 2025-11-25 11:50:25,509 | INFO     | [job] validate thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,628 | INFO     | all job control threads have been joined
[2025-11-25 04:51:23] 2025-11-25 11:50:25,642 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,666 | INFO     | [data] control thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:25,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,033 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,164 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,170 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,307 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,506 | INFO     | [payload] control thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,629 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:26,633 | INFO     | [job] control thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:28,320 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:51:23] 2025-11-25 11:50:54,025 | INFO     | PID=896641 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 04:51:23] 2025-11-25 11:50:54,025 | INFO     | .. there are 3 such processes running
[2025-11-25 04:51:23] 2025-11-25 11:50:54,025 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:51:23] 2025-11-25 11:50:54,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:51:23] 2025-11-25 11:50:54,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:51:23] 2025-11-25 11:51:18,265 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:51:23] 2025-11-25 11:51:18,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660982114112)>', '<ExcThread(monitor, started 140660355090176)>']
[2025-11-25 04:51:23] 2025-11-25 11:51:19,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:51:23] 2025-11-25 11:51:19,147 | INFO     | [monitor] control thread has ended
[2025-11-25 04:51:23] 2025-11-25 11:51:23,658 | INFO     | all workflow threads have been joined
[2025-11-25 04:51:23] 2025-11-25 11:51:23,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:51:23] 2025-11-25 11:51:23,659 | INFO     | traces error code: 0
[2025-11-25 04:51:23] 2025-11-25 11:51:23,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:51:23] 2025-11-25 11:51:23,696 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:51:23] 2025-11-25 11:51:23,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:51:23] 2025-11-25 11:51:23,698 [wrapper] pilotpid: 896641
[2025-11-25 04:51:23] 2025-11-25 11:51:23,699 [wrapper] Pilot exit status: 0
[2025-11-25 04:51:23] 2025-11-25 11:51:23,702 [wrapper] pandaids: 6895353833
[2025-11-25 04:51:23] 2025-11-25 11:51:23,717 [wrapper] cleanup supervisor_pilot 1045165 896642
[2025-11-25 04:51:23] 2025-11-25 11:51:23,718 [wrapper] Test setup, not cleaning
[2025-11-25 04:51:23] 2025-11-25 11:51:23,719 [wrapper] apfmon messages muted
[2025-11-25 04:51:23] 2025-11-25 11:51:23,720 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:51:23] 2025-11-25 11:51:23,721 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:51:23]  *** Error codes and diagnostics ***
[2025-11-25 04:51:23]     "exeErrorCode": 0,
[2025-11-25 04:51:23]     "exeErrorDiag": "",
[2025-11-25 04:51:23]     "pilotErrorCode": 0,
[2025-11-25 04:51:23]     "pilotErrorDiag": "",
[2025-11-25 04:51:23]  *** Listing of results directory ***
[2025-11-25 04:51:23] total 1322660
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc    576529 Nov 22 21:55 pilot3.tar.gz
[2025-11-25 04:51:23] -rwx------ 1 boinc boinc     36292 Nov 22 22:18 runpilot2-wrapper.sh
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc      5112 Nov 22 22:18 queuedata.json
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc       100 Nov 25 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:51:23] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 00:25 run_atlas
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc       105 Nov 25 00:25 job.xml
[2025-11-25 04:51:23] -rw-r--r-- 2 boinc boinc 412922997 Nov 25 00:25 EVNT.47483658._000627.pool.root.1
[2025-11-25 04:51:23] -rw-r--r-- 2 boinc boinc     15847 Nov 25 00:25 start_atlas.sh
[2025-11-25 04:51:23] drwxrwx--x 2 boinc boinc      4096 Nov 25 00:25 shared
[2025-11-25 04:51:23] -rw-r--r-- 2 boinc boinc    590097 Nov 25 00:25 input.tar.gz
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc      9935 Nov 25 00:25 init_data.xml
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc         0 Nov 25 00:25 boinc_lockfile
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc      2782 Nov 25 00:25 pandaJob.out
[2025-11-25 04:51:23] -rw------- 1 boinc boinc    991830 Nov 25 00:25 agis_schedconf.cvmfs.json
[2025-11-25 04:51:23] drwx------ 5 boinc boinc      4096 Nov 25 00:25 pilot3
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc       532 Nov 25 04:47 boinc_task_state.xml
[2025-11-25 04:51:23] -rw------- 1 boinc boinc 929785605 Nov 25 04:49 HITS.47556137._006221.pool.root.1
[2025-11-25 04:51:23] -rw------- 1 boinc boinc      1036 Nov 25 04:50 memory_monitor_summary.json
[2025-11-25 04:51:23] -rw------- 1 boinc boinc        95 Nov 25 04:50 pilot_heartbeat.json
[2025-11-25 04:51:23] -rw------- 1 boinc boinc   1516240 Nov 25 04:50 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:51:23] -rw------- 1 boinc boinc   1569711 Nov 25 04:50 log.47556137._006221.job.log.tgz.1
[2025-11-25 04:51:23] -rw------- 1 boinc boinc      8548 Nov 25 04:50 heartbeat.json
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc      8192 Nov 25 04:51 boinc_mmap_file
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc        29 Nov 25 04:51 wrapper_checkpoint.txt
[2025-11-25 04:51:23] -rw------- 1 boinc boinc      4830 Nov 25 04:51 pilotlog.txt
[2025-11-25 04:51:23] -rw------- 1 boinc boinc   2316632 Nov 25 04:51 log.47556137._006221.job.log.1
[2025-11-25 04:51:23] -rw------- 1 boinc boinc       353 Nov 25 04:51 output.list
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc       620 Nov 25 04:51 runtime_log
[2025-11-25 04:51:23] -rw------- 1 boinc boinc   3901440 Nov 25 04:51 result.tar.gz
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc      8923 Nov 25 04:51 runtime_log.err
[2025-11-25 04:51:23] -rw------- 1 boinc boinc       662 Nov 25 04:51 4FJNDmZfHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUeKKDmppgOqm.diag
[2025-11-25 04:51:23] -rw-r--r-- 1 boinc boinc     21390 Nov 25 04:51 stderr.txt
[2025-11-25 04:51:23] HITS file was successfully produced:
[2025-11-25 04:51:23] -rw------- 1 boinc boinc 929785605 Nov 25 04:49 shared/HITS.pool.root.1
[2025-11-25 04:51:23]  *** Contents of shared directory: ***
[2025-11-25 04:51:23] total 1315660
[2025-11-25 04:51:23] -rw-r--r-- 2 boinc boinc 412922997 Nov 25 00:25 ATLAS.root_0
[2025-11-25 04:51:23] -rw-r--r-- 2 boinc boinc     15847 Nov 25 00:25 start_atlas.sh
[2025-11-25 04:51:23] -rw-r--r-- 2 boinc boinc    590097 Nov 25 00:25 input.tar.gz
[2025-11-25 04:51:23] -rw------- 1 boinc boinc 929785605 Nov 25 04:49 HITS.pool.root.1
[2025-11-25 04:51:23] -rw------- 1 boinc boinc   3901440 Nov 25 04:51 result.tar.gz
04:51:25 (892791): run_atlas exited; CPU time 104697.336289
04:51:25 (892791): called boinc_finish(0)

</stderr_txt>
]]>

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