Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:23 (3129559): wrapper (7.7.26015): starting
00:02:23 (3129559): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:02:23] Arguments: --nthreads 12
[2025-11-25 00:02:23] Threads: 12
[2025-11-25 00:02:23] Checking for CVMFS
[2025-11-25 00:02:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:02:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:02:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:02:26] 2.13.2.0 5986 33708 360712 153270 0 66 25251824 40960000 17196 16776704 0 67303416 99.785 58640025 35774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:02:26] CVMFS is ok
[2025-11-25 00:02:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:02:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:02:26] Further information can be found at the LHC@home message board.
[2025-11-25 00:02:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:02:26] Checking for apptainer binary...
[2025-11-25 00:02:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:02:26] Running /usr/bin/apptainer --version
[2025-11-25 00:02:26] apptainer version 1.4.4-1.el9
[2025-11-25 00:02:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:02:27] c-210-31-1.aglt2.org
[2025-11-25 00:02:27] apptainer works
[2025-11-25 00:02:27] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:02:27] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:02:27] Starting ATLAS job with PandaID=6895365627
[2025-11-25 00:02:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:53:11]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:53:11] 2025-11-26 01:52:15,202 | INFO     | monitor loop #4701: job 0:6895365627 is in state 'finished'
[2025-11-25 20:53:11] 2025-11-26 01:52:15,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:53:11] 2025-11-26 01:52:16,982 | INFO     | time since job start (74910s) is within the limit (172800.0s)
[2025-11-25 20:53:11] 2025-11-26 01:52:17,723 | INFO     | monitor loop #4702: job 0:6895365627 is in state 'finished'
[2025-11-25 20:53:11] 2025-11-26 01:52:17,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:53:11] 2025-11-26 01:52:18,938 | INFO     | PID=3134721 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 20:53:11] 2025-11-26 01:52:18,938 | INFO     | .. there are 17 such processes running
[2025-11-25 20:53:11] 2025-11-26 01:52:19,939 | INFO     | time since job start (74913s) is within the limit (172800.0s)
[2025-11-25 20:53:11] 2025-11-26 01:52:20,248 | INFO     | monitor loop #4703: job 0:6895365627 is in state 'finished'
[2025-11-25 20:53:11] 2025-11-26 01:52:20,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:53:11] 2025-11-26 01:52:20,910 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 20:53:11] 2025-11-26 01:52:20,914 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2992.1700892857143
[2025-11-25 20:53:11] 2025-11-26 01:52:20,949 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895365627/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:53:11] 2025-11-26 01:52:20,950 | INFO     | extracted standard info from prmon json
[2025-11-25 20:53:11] 2025-11-26 01:52:20,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:53:11] 2025-11-26 01:52:20,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:53:11] 2025-11-26 01:52:20,990 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:53:11] 2025-11-26 01:52:20,995 | INFO     | sum of square deviations: 570322534667.9077
[2025-11-25 20:53:11] 2025-11-26 01:52:21,078 | INFO     | sum of deviations: 6240545053266.707
[2025-11-25 20:53:11] 2025-11-26 01:52:21,079 | INFO     | mean x: 1764084579.5167346
[2025-11-25 20:53:11] 2025-11-26 01:52:21,079 | INFO     | mean y: 3425787.47755102
[2025-11-25 20:53:11] 2025-11-26 01:52:21,079 | INFO     | intersect: -19299422385.3683
[2025-11-25 20:53:11] 2025-11-26 01:52:21,080 | INFO     | chi2: 15.352448086015634
[2025-11-25 20:53:11] 2025-11-26 01:52:21,082 | INFO     | sum of square deviations: 563371023771.7343
[2025-11-25 20:53:11] 2025-11-26 01:52:21,108 | INFO     | sum of deviations: 6740662502793.904
[2025-11-25 20:53:11] 2025-11-26 01:52:21,108 | INFO     | mean x: 1764084427.014754
[2025-11-25 20:53:11] 2025-11-26 01:52:21,108 | INFO     | mean y: 3436757.2827868853
[2025-11-25 20:53:11] 2025-11-26 01:52:21,108 | INFO     | intersect: -21103608595.051556
[2025-11-25 20:53:11] 2025-11-26 01:52:21,110 | INFO     | chi2: 11.97925336015881
[2025-11-25 20:53:11] 2025-11-26 01:52:21,110 | INFO     | current chi2=11.97925336015881 (change=21.971705795438766 %)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,110 | INFO     | right removable region: 1219
[2025-11-25 20:53:11] 2025-11-26 01:52:21,111 | INFO     | sum of square deviations: 563355459439.2618
[2025-11-25 20:53:11] 2025-11-26 01:52:21,140 | INFO     | sum of deviations: 5659719347823.232
[2025-11-25 20:53:11] 2025-11-26 01:52:21,140 | INFO     | mean x: 1764084732.1893442
[2025-11-25 20:53:11] 2025-11-26 01:52:21,141 | INFO     | mean y: 3438513.7868852457
[2025-11-25 20:53:11] 2025-11-26 01:52:21,141 | INFO     | intersect: -17719340812.625317
[2025-11-25 20:53:11] 2025-11-26 01:52:21,142 | INFO     | chi2: 11.30326214958289
[2025-11-25 20:53:11] 2025-11-26 01:52:21,142 | INFO     | current chi2=11.30326214958289 (change=26.3748550963745 %)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,144 | INFO     | sum of square deviations: 556445054760.5929
[2025-11-25 20:53:11] 2025-11-26 01:52:21,169 | INFO     | sum of deviations: 5196118746319.094
[2025-11-25 20:53:11] 2025-11-26 01:52:21,169 | INFO     | mean x: 1764084884.8641975
[2025-11-25 20:53:11] 2025-11-26 01:52:21,169 | INFO     | mean y: 3448753.073251029
[2025-11-25 20:53:11] 2025-11-26 01:52:21,170 | INFO     | intersect: -16469686306.568537
[2025-11-25 20:53:11] 2025-11-26 01:52:21,171 | INFO     | chi2: 8.89072600046355
[2025-11-25 20:53:11] 2025-11-26 01:52:21,171 | INFO     | current chi2=8.89072600046355 (change=21.343715798083714 %)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,171 | INFO     | left removable region: 20
[2025-11-25 20:53:11] 2025-11-26 01:52:21,172 | INFO     | sum of square deviations: 534732399411.5251
[2025-11-25 20:53:11] 2025-11-26 01:52:21,197 | INFO     | sum of deviations: 5318622441921.636
[2025-11-25 20:53:11] 2025-11-26 01:52:21,197 | INFO     | mean x: 1764085007.1859884
[2025-11-25 20:53:11] 2025-11-26 01:52:21,198 | INFO     | mean y: 3473680.4186822353
[2025-11-25 20:53:11] 2025-11-26 01:52:21,198 | INFO     | intersect: -17542689819.31009
[2025-11-25 20:53:11] 2025-11-26 01:52:21,199 | INFO     | chi2: 3.2933535936818346
[2025-11-25 20:53:11] 2025-11-26 01:52:21,199 | INFO     | current memory leak: 9.95 B/s (using 1199 data points, chi2=3.29)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,200 | INFO     | could have reported an average CPU frequency of 2796 MHz (44 samples)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | ..............................
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . Timing measurements:
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . get job = 0 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . initial setup = 3 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . payload setup = 52 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . stage-in = 0 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . payload execution = 74753 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . stage-out = 5 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | . log creation = 1 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,201 | INFO     | ..............................
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | 
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | job summary report
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | --------------------------------------------------
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | PanDA job id: 6895365627
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | task id: 47556137
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | errors: (none)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,505 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | pilot state: finished 
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | transexitcode: 0
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | exeerrorcode: 0
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | exeerrordiag: 
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | exitcode: 0
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | exitmsg: OK
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | cpuconsumptiontime: 257435 s
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | nevents: 1000
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | neventsw: 0
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | pid: 3142711
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | pgrp: 3142711
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | corecount: 12
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | event service: False
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | sizes: {0: 2284138, 1: 2284337, 3: 2284337, 14: 2284365, 25: 2284393, 35: 2284421, 40: 2284839, 46: 2284867, 74806: 2344621, 74807: 2344620, 74812: 2354011, 74831:
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | --------------------------------------------------
[2025-11-25 20:53:11] 2025-11-26 01:52:21,506 | INFO     | 
[2025-11-25 20:53:11] 2025-11-26 01:52:21,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 20:53:11] 2025-11-26 01:52:21,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | job 6895365627 has completed (purged errors)
[2025-11-25 20:53:11] 2025-11-26 01:52:21,558 | INFO     | overall cleanup function is called
[2025-11-25 20:53:11] 2025-11-26 01:52:22,605 | INFO     | --- collectZombieJob: --- 10, [3142711]
[2025-11-25 20:53:11] 2025-11-26 01:52:22,605 | INFO     | zombie collector waiting for pid 3142711
[2025-11-25 20:53:11] 2025-11-26 01:52:22,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:53:11] 2025-11-26 01:52:22,605 | INFO     | collected zombie processes
[2025-11-25 20:53:11] 2025-11-26 01:52:22,605 | INFO     | will attempt to kill all subprocesses of pid=3142711
[2025-11-25 20:53:11] 2025-11-26 01:52:23,216 | INFO     | process IDs to be killed: [3142711] (in reverse order)
[2025-11-25 20:53:11] 2025-11-26 01:52:23,492 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:53:11] 2025-11-26 01:52:23,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:53:11] 2025-11-26 01:52:23,517 | INFO     | did not find any defunct processes belonging to 3142711
[2025-11-25 20:53:11] 2025-11-26 01:52:23,540 | INFO     | did not find any defunct processes belonging to 3142711
[2025-11-25 20:53:11] 2025-11-26 01:52:23,541 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:53:11] 2025-11-26 01:52:23,542 | INFO     | ready for new job
[2025-11-25 20:53:11] 2025-11-26 01:52:23,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:53:11] 2025-11-26 01:52:23,572 | INFO     | ***************************************
[2025-11-25 20:53:11] 2025-11-26 01:52:23,572 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:53:11] 2025-11-26 01:52:23,572 | INFO     | ***************************************
[2025-11-25 20:53:11] 2025-11-26 01:52:23,572 | INFO     | 
[2025-11-25 20:53:11] 2025-11-26 01:52:23,589 | INFO     | architecture information:
[2025-11-25 20:53:11] 2025-11-26 01:52:23,615 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:53:11] 2025-11-26 01:52:23,688 | INFO     | cat /etc/os-release:
[2025-11-25 20:53:11] NAME="CentOS Linux"
[2025-11-25 20:53:11] VERSION="7 (Core)"
[2025-11-25 20:53:11] ID="centos"
[2025-11-25 20:53:11] ID_LIKE="rhel fedora"
[2025-11-25 20:53:11] VERSION_ID="7"
[2025-11-25 20:53:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:53:11] ANSI_COLOR="0;31"
[2025-11-25 20:53:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:53:11] HOME_URL="https://www.centos.org/"
[2025-11-25 20:53:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:53:11] 
[2025-11-25 20:53:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:53:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:53:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:53:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:53:11] 
[2025-11-25 20:53:11] 2025-11-26 01:52:23,688 | INFO     | ***************************************
[2025-11-25 20:53:11] 2025-11-26 01:52:24,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 20:53:11] 2025-11-26 01:52:24,261 | INFO     | sufficient remaining disk space (70314360832 B)
[2025-11-25 20:53:11] 2025-11-26 01:52:24,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:53:11] 2025-11-26 01:52:24,262 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:53:11] 2025-11-26 01:52:24,262 | INFO     | update_server=False
[2025-11-25 20:53:11] 2025-11-26 01:52:24,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:53:11] 2025-11-26 01:52:24,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:53:11] 2025-11-26 01:52:24,262 | INFO     | aborting loop
[2025-11-25 20:53:11] 2025-11-26 01:52:24,509 | INFO     | all data control threads have been joined
[2025-11-25 20:53:11] 2025-11-26 01:52:24,617 | INFO     | all job control threads have been joined
[2025-11-25 20:53:11] 2025-11-26 01:52:25,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:53:11] 2025-11-26 01:52:25,268 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,268 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,437 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,463 | INFO     | all payload control threads have been joined
[2025-11-25 20:53:11] 2025-11-26 01:52:25,515 | INFO     | [data] control thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,623 | INFO     | [job] control thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,882 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:25,893 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:26,194 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:53:11] 2025-11-26 01:52:26,208 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:26,390 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:26,390 | INFO     | [job] validate thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:26,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:53:11] 2025-11-26 01:52:26,479 | INFO     | [payload] control thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:26,540 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:27,236 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:27,406 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:30,223 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:53:11] 2025-11-26 01:52:54,077 | INFO     | PID=3134721 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 20:53:11] 2025-11-26 01:52:54,077 | INFO     | .. there are 17 such processes running
[2025-11-25 20:53:11] 2025-11-26 01:52:54,079 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:53:11] 2025-11-26 01:52:54,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:53:11] 2025-11-26 01:52:54,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:53:11] 2025-11-26 01:53:04,247 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:53:11] 2025-11-26 01:53:04,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412506183488)>', '<ExcThread(monitor, started 140411876144896)>']
[2025-11-25 20:53:11] 2025-11-26 01:53:05,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:53:11] 2025-11-26 01:53:05,154 | INFO     | [monitor] control thread has ended
[2025-11-25 20:53:11] 2025-11-26 01:53:09,704 | INFO     | all workflow threads have been joined
[2025-11-25 20:53:11] 2025-11-26 01:53:09,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:53:11] 2025-11-26 01:53:09,705 | INFO     | traces error code: 0
[2025-11-25 20:53:11] 2025-11-26 01:53:09,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:53:11] 2025-11-26 01:53:10,759 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:53:11] 2025-11-26 01:53:10,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:53:11] 2025-11-26 01:53:10,792 [wrapper] pilotpid: 3134721
[2025-11-25 20:53:11] 2025-11-26 01:53:10,807 [wrapper] Pilot exit status: 0
[2025-11-25 20:53:11] 2025-11-26 01:53:10,882 [wrapper] pandaids: 6895365627
[2025-11-25 20:53:11] 2025-11-26 01:53:11,297 [wrapper] cleanup supervisor_pilot 1401697 3134722
[2025-11-25 20:53:11] 2025-11-26 01:53:11,301 [wrapper] Test setup, not cleaning
[2025-11-25 20:53:11] 2025-11-26 01:53:11,304 [wrapper] apfmon messages muted
[2025-11-25 20:53:11] 2025-11-26 01:53:11,306 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:53:11] 2025-11-26 01:53:11,309 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:53:11]  *** Error codes and diagnostics ***
[2025-11-25 20:53:11]     "exeErrorCode": 0,
[2025-11-25 20:53:11]     "exeErrorDiag": "",
[2025-11-25 20:53:11]     "pilotErrorCode": 0,
[2025-11-25 20:53:11]     "pilotErrorDiag": "",
[2025-11-25 20:53:11]  *** Listing of results directory ***
[2025-11-25 20:53:11] total 1327468
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-25 20:53:11] -rwx------. 1 boincer umatlas     36292 Nov 23 12:27 runpilot2-wrapper.sh
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 12:27 queuedata.json
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:53:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:02 run_atlas
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:02 job.xml
[2025-11-25 20:53:11] -rw-r--r--. 2 boincer umatlas 409765075 Nov 25 00:02 EVNT.47483658._000825.pool.root.1
[2025-11-25 20:53:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:02 start_atlas.sh
[2025-11-25 20:53:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:02 shared
[2025-11-25 20:53:11] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 00:02 input.tar.gz
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:02 boinc_lockfile
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:02 pandaJob.out
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas        57 Nov 25 00:02 setup.sh.local
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas    991801 Nov 25 00:03 agis_schedconf.cvmfs.json
[2025-11-25 20:53:11] drwx------. 5 boincer umatlas      4096 Nov 25 00:03 pilot3
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas       533 Nov 25 20:30 boinc_task_state.xml
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas      6844 Nov 25 20:49 init_data.xml
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas 920711355 Nov 25 20:51 HITS.47556137._008116.pool.root.1
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas      1073 Nov 25 20:51 memory_monitor_summary.json
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas   1516240 Nov 25 20:51 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas   2775542 Nov 25 20:52 log.47556137._008116.job.log.tgz.1
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas      8659 Nov 25 20:52 heartbeat.json
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas        95 Nov 25 20:52 pilot_heartbeat.json
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 20:53 boinc_mmap_file
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas        29 Nov 25 20:53 wrapper_checkpoint.txt
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas      4824 Nov 25 20:53 pilotlog.txt
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas   9686140 Nov 25 20:53 log.47556137._008116.job.log.1
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas       353 Nov 25 20:53 output.list
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas       620 Nov 25 20:53 runtime_log
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas  12482560 Nov 25 20:53 result.tar.gz
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas      9355 Nov 25 20:53 runtime_log.err
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas       667 Nov 25 20:53 pE4LDmh2Sh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5eIKDmmucyem.diag
[2025-11-25 20:53:11] -rw-r--r--. 1 boincer umatlas     21678 Nov 25 20:53 stderr.txt
[2025-11-25 20:53:11] HITS file was successfully produced:
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas 920711355 Nov 25 20:51 shared/HITS.pool.root.1
[2025-11-25 20:53:11]  *** Contents of shared directory: ***
[2025-11-25 20:53:11] total 1312096
[2025-11-25 20:53:11] -rw-r--r--. 2 boincer umatlas 409765075 Nov 25 00:02 ATLAS.root_0
[2025-11-25 20:53:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:02 start_atlas.sh
[2025-11-25 20:53:11] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 00:02 input.tar.gz
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas 920711355 Nov 25 20:51 HITS.pool.root.1
[2025-11-25 20:53:11] -rw-------. 1 boincer umatlas  12482560 Nov 25 20:53 result.tar.gz
20:53:13 (3129559): run_atlas exited; CPU time 257975.535220
20:53:13 (3129559): called boinc_finish(0)

</stderr_txt>
]]>

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