Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:35:33 (2493962): wrapper (7.7.26015): starting
09:35:33 (2493962): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:35:33] Arguments: --nthreads 8
[2025-11-26 09:35:33] Threads: 8
[2025-11-26 09:35:33] Checking for CVMFS
[2025-11-26 09:35:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:35:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:35:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:35:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:35:33] 2.12.7.0 3613689 6348 52860 153315 3 251 5135261 6144000 2734 130560 1 20884482 99.972 695319 679 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 09:35:33] CVMFS is ok
[2025-11-26 09:35:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:35:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 09:35:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 09:35:33] Further information can be found at the LHC@home message board.
[2025-11-26 09:35:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:35:33] Checking for apptainer binary...
[2025-11-26 09:35:33] apptainer is not installed, using version from CVMFS
[2025-11-26 09:35:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:35:33] biggy
[2025-11-26 09:35:33] apptainer works
[2025-11-26 09:35:33] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:35:33] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:35:33] Starting ATLAS job with PandaID=6893874355
[2025-11-26 09:35:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:03:05]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:03:05] 2025-11-26 12:02:23,325 | INFO     | monitor loop #926: job 0:6893874355 is in state 'finished'
[2025-11-26 13:03:05] 2025-11-26 12:02:23,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 13:03:05] 2025-11-26 12:02:23,903 | INFO     | time since job start (12405s) is within the limit (172800.0s)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,552 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 13:03:05] 2025-11-26 12:02:25,554 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5157.395281249999
[2025-11-26 13:03:05] 2025-11-26 12:02:25,557 | INFO     | using path: /single_8TB/boinc-client/slots/1/PanDA_Pilot-6893874355/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,558 | INFO     | extracted standard info from prmon json
[2025-11-26 13:03:05] 2025-11-26 12:02:25,558 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:03:05] 2025-11-26 12:02:25,558 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:03:05] 2025-11-26 12:02:25,559 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:03:05] 2025-11-26 12:02:25,560 | INFO     | sum of square deviations: 2593916542.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,560 | INFO     | sum of deviations: 48894160636.99994
[2025-11-26 13:03:05] 2025-11-26 12:02:25,560 | INFO     | mean x: 1764152318.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,560 | INFO     | mean y: 2857265.7044334975
[2025-11-26 13:03:05] 2025-11-26 12:02:25,560 | INFO     | intersect: -33250620796.43894
[2025-11-26 13:03:05] 2025-11-26 12:02:25,561 | INFO     | chi2: 3.16592605550116
[2025-11-26 13:03:05] 2025-11-26 12:02:25,561 | INFO     | sum of square deviations: 2406926989.5
[2025-11-26 13:03:05] 2025-11-26 12:02:25,561 | INFO     | sum of deviations: 80378727415.99998
[2025-11-26 13:03:05] 2025-11-26 12:02:25,561 | INFO     | mean x: 1764152165.5
[2025-11-26 13:03:05] 2025-11-26 12:02:25,561 | INFO     | mean y: 2882594.474747475
[2025-11-26 13:03:05] 2025-11-26 12:02:25,562 | INFO     | intersect: -58910539644.61332
[2025-11-26 13:03:05] 2025-11-26 12:02:25,562 | INFO     | chi2: 1.753776161131974
[2025-11-26 13:03:05] 2025-11-26 12:02:25,562 | INFO     | current chi2=1.753776161131974 (change=44.604639199181975 %)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,562 | INFO     | sum of square deviations: 2229146912.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,562 | INFO     | sum of deviations: 76562983802.00002
[2025-11-26 13:03:05] 2025-11-26 12:02:25,562 | INFO     | mean x: 1764152013.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | mean y: 2879321.435233161
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | intersect: -60589242834.569496
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | chi2: 1.754736537891991
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | current chi2=1.754736537891991 (change=-0.054760509425396654 %)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | right removable region: 192
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | sum of square deviations: 2406926989.5
[2025-11-26 13:03:05] 2025-11-26 12:02:25,563 | INFO     | sum of deviations: 6829841606.499989
[2025-11-26 13:03:05] 2025-11-26 12:02:25,564 | INFO     | mean x: 1764152470.5
[2025-11-26 13:03:05] 2025-11-26 12:02:25,564 | INFO     | mean y: 2891238.883838384
[2025-11-26 13:03:05] 2025-11-26 12:02:25,564 | INFO     | intersect: -5003027925.175892
[2025-11-26 13:03:05] 2025-11-26 12:02:25,564 | INFO     | chi2: 1.4758897870160723
[2025-11-26 13:03:05] 2025-11-26 12:02:25,564 | INFO     | current chi2=1.4758897870160723 (change=53.38205121842488 %)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,564 | INFO     | sum of square deviations: 2229146912.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | sum of deviations: 2587076856.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | mean x: 1764152623.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | mean y: 2894868.1761658033
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | intersect: -2044524436.870963
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | chi2: 1.471400478668261
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | current chi2=1.471400478668261 (change=0.30417639496561955 %)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | left removable region: 20
[2025-11-26 13:03:05] 2025-11-26 12:02:25,565 | INFO     | sum of square deviations: 1577789583.0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | sum of deviations: 26199767668.000004
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | mean x: 1764152592.5
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | mean y: 2924368.1395348837
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | intersect: -29291468593.003426
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | chi2: 0.022515575605553506
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | current memory leak: 16.61 B/s (using 172 data points, chi2=0.02)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | could have reported an average CPU frequency of 5099 MHz (10 samples)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | ..............................
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | . Timing measurements:
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | . get job = 0 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | . initial setup = 1 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | . payload setup = 2 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,566 | INFO     | . stage-in = 0 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,567 | INFO     | . payload execution = 12380 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,567 | INFO     | . stage-out = 2 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,567 | INFO     | . log creation = 0 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,567 | INFO     | ..............................
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | 
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | job summary report
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | --------------------------------------------------
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | PanDA job id: 6893874355
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | task id: 47523449
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | errors: (none)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | pilot state: finished 
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | transexitcode: 0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,607 | INFO     | exeerrorcode: 0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | exeerrordiag: 
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | exitcode: 0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | exitmsg: OK
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | cpuconsumptiontime: 95495 s
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | nevents: 1000
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | neventsw: 0
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | pid: 2504496
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | pgrp: 2504496
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | corecount: 8
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | event service: False
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | sizes: {0: 2284097, 1: 2284352, 3: 2284614, 11: 2284642, 12387: 2315530, 12390: 2324728, 12394: 2324918}
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | --------------------------------------------------
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | 
[2025-11-26 13:03:05] 2025-11-26 12:02:25,608 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/1
[2025-11-26 13:03:05] 2025-11-26 12:02:25,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:03:05] 2025-11-26 12:02:25,622 | INFO     | job 6893874355 has completed (purged errors)
[2025-11-26 13:03:05] 2025-11-26 12:02:25,622 | INFO     | overall cleanup function is called
[2025-11-26 13:03:05] 2025-11-26 12:02:26,635 | INFO     | --- collectZombieJob: --- 10, [2504496]
[2025-11-26 13:03:05] 2025-11-26 12:02:26,635 | INFO     | zombie collector waiting for pid 2504496
[2025-11-26 13:03:05] 2025-11-26 12:02:26,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:03:05] 2025-11-26 12:02:26,635 | INFO     | collected zombie processes
[2025-11-26 13:03:05] 2025-11-26 12:02:26,635 | INFO     | will attempt to kill all subprocesses of pid=2504496
[2025-11-26 13:03:05] 2025-11-26 12:02:26,747 | INFO     | process IDs to be killed: [2504496] (in reverse order)
[2025-11-26 13:03:05] 2025-11-26 12:02:26,790 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:03:05] 2025-11-26 12:02:26,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:03:05] 2025-11-26 12:02:26,794 | INFO     | did not find any defunct processes belonging to 2504496
[2025-11-26 13:03:05] 2025-11-26 12:02:26,798 | INFO     | did not find any defunct processes belonging to 2504496
[2025-11-26 13:03:05] 2025-11-26 12:02:26,799 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:03:05] 2025-11-26 12:02:26,799 | INFO     | ready for new job
[2025-11-26 13:03:05] 2025-11-26 12:02:26,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:03:05] 2025-11-26 12:02:26,799 | INFO     | ***************************************
[2025-11-26 13:03:05] 2025-11-26 12:02:26,799 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:03:05] 2025-11-26 12:02:26,800 | INFO     | ***************************************
[2025-11-26 13:03:05] 2025-11-26 12:02:26,800 | INFO     | 
[2025-11-26 13:03:05] 2025-11-26 12:02:26,800 | INFO     | architecture information:
[2025-11-26 13:03:05] 2025-11-26 12:02:26,801 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:03:05] 2025-11-26 12:02:26,810 | INFO     | cat /etc/os-release:
[2025-11-26 13:03:05] NAME="CentOS Linux"
[2025-11-26 13:03:05] VERSION="7 (Core)"
[2025-11-26 13:03:05] ID="centos"
[2025-11-26 13:03:05] ID_LIKE="rhel fedora"
[2025-11-26 13:03:05] VERSION_ID="7"
[2025-11-26 13:03:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:03:05] ANSI_COLOR="0;31"
[2025-11-26 13:03:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:03:05] HOME_URL="https://www.centos.org/"
[2025-11-26 13:03:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:03:05] 
[2025-11-26 13:03:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:03:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:03:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:03:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:03:05] 
[2025-11-26 13:03:05] 2025-11-26 12:02:26,810 | INFO     | ***************************************
[2025-11-26 13:03:05] 2025-11-26 12:02:27,313 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/1
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | INFO     | sufficient remaining disk space (954128662528 B)
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | INFO     | update_server=False
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:03:05] 2025-11-26 12:02:27,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:03:05] 2025-11-26 12:02:27,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:03:05] 2025-11-26 12:02:27,326 | INFO     | aborting loop
[2025-11-26 13:03:05] 2025-11-26 12:02:27,437 | INFO     | all job control threads have been joined
[2025-11-26 13:03:05] 2025-11-26 12:02:27,512 | INFO     | all payload control threads have been joined
[2025-11-26 13:03:05] 2025-11-26 12:02:28,120 | INFO     | all data control threads have been joined
[2025-11-26 13:03:05] 2025-11-26 12:02:28,330 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,331 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,331 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,379 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,440 | INFO     | [job] control thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,463 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,518 | INFO     | [payload] control thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,989 | INFO     | [job] validate thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:28,991 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:29,125 | INFO     | [data] control thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:29,126 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:29,331 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:29,378 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:29,770 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:31,332 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:03:05] 2025-11-26 12:02:57,103 | INFO     | PID=2497814 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 13:03:05] 2025-11-26 12:02:57,103 | INFO     | .. there are 4 such processes running
[2025-11-26 13:03:05] 2025-11-26 12:02:57,104 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:03:05] 2025-11-26 12:02:57,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:03:05] 2025-11-26 12:02:57,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:03:05] 2025-11-26 12:02:58,878 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:03:05] 2025-11-26 12:03:00,709 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126743613970240)>', '<ExcThread(monitor, started 126742798788352)>']
[2025-11-26 13:03:05] 2025-11-26 12:03:01,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:03:05] 2025-11-26 12:03:01,124 | INFO     | [monitor] control thread has ended
[2025-11-26 13:03:05] 2025-11-26 12:03:05,734 | INFO     | all workflow threads have been joined
[2025-11-26 13:03:05] 2025-11-26 12:03:05,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:03:05] 2025-11-26 12:03:05,735 | INFO     | traces error code: 0
[2025-11-26 13:03:05] 2025-11-26 12:03:05,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:03:05] 2025-11-26 12:03:05,784 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:03:05] 2025-11-26 12:03:05,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:03:05] 2025-11-26 12:03:05,788 [wrapper] pilotpid: 2497814
[2025-11-26 13:03:05] 2025-11-26 12:03:05,789 [wrapper] Pilot exit status: 0
[2025-11-26 13:03:05] 2025-11-26 12:03:05,795 [wrapper] pandaids: 6893874355
[2025-11-26 13:03:05] 2025-11-26 12:03:05,825 [wrapper] cleanup supervisor_pilot 2709911 2497815
[2025-11-26 13:03:05] 2025-11-26 12:03:05,827 [wrapper] Test setup, not cleaning
[2025-11-26 13:03:05] 2025-11-26 12:03:05,829 [wrapper] apfmon messages muted
[2025-11-26 13:03:05] 2025-11-26 12:03:05,830 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:03:05] 2025-11-26 12:03:05,832 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:03:05]  *** Error codes and diagnostics ***
[2025-11-26 13:03:05]     "exeErrorCode": 0,
[2025-11-26 13:03:05]     "exeErrorDiag": "",
[2025-11-26 13:03:05]     "pilotErrorCode": 0,
[2025-11-26 13:03:05]     "pilotErrorDiag": "",
[2025-11-26 13:03:05]  *** Listing of results directory ***
[2025-11-26 13:03:05] total 1297392
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc    576529 Nov 20 17:00 pilot3.tar.gz
[2025-11-26 13:03:05] -rwx------ 1 boinc boinc     36292 Nov 20 17:04 runpilot2-wrapper.sh
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc      5112 Nov 20 17:04 queuedata.json
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc       100 Nov 26 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:03:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 09:35 run_atlas
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc       105 Nov 26 09:35 job.xml
[2025-11-26 13:03:05] -rw-r--r-- 2 boinc boinc 411881421 Nov 26 09:35 EVNT.47493127._000715.pool.root.1
[2025-11-26 13:03:05] -rw-r--r-- 2 boinc boinc    590096 Nov 26 09:35 input.tar.gz
[2025-11-26 13:03:05] drwxrwx--x 2 boinc boinc         5 Nov 26 09:35 shared
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:35 boinc_setup_complete
[2025-11-26 13:03:05] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:35 start_atlas.sh
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc      6806 Nov 26 09:35 init_data.xml
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc         0 Nov 26 09:35 boinc_lockfile
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc      2785 Nov 26 09:35 pandaJob.out
[2025-11-26 13:03:05] -rw------- 1 boinc boinc    991877 Nov 26 09:35 agis_schedconf.cvmfs.json
[2025-11-26 13:03:05] drwx------ 5 boinc boinc        22 Nov 26 09:35 pilot3
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc       531 Nov 26 12:58 boinc_task_state.xml
[2025-11-26 13:03:05] -rw------- 1 boinc boinc 908285237 Nov 26 13:02 HITS.47523449._007148.pool.root.1
[2025-11-26 13:03:05] -rw------- 1 boinc boinc      1049 Nov 26 13:02 memory_monitor_summary.json
[2025-11-26 13:03:05] -rw------- 1 boinc boinc        95 Nov 26 13:02 pilot_heartbeat.json
[2025-11-26 13:03:05] -rw------- 1 boinc boinc   1516240 Nov 26 13:02 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:03:05] -rw------- 1 boinc boinc   1538311 Nov 26 13:02 log.47523449._007148.job.log.tgz.1
[2025-11-26 13:03:05] -rw------- 1 boinc boinc      8555 Nov 26 13:02 heartbeat.json
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc        28 Nov 26 13:03 wrapper_checkpoint.txt
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc      8192 Nov 26 13:03 boinc_mmap_file
[2025-11-26 13:03:05] -rw------- 1 boinc boinc      4834 Nov 26 13:03 pilotlog.txt
[2025-11-26 13:03:05] -rw------- 1 boinc boinc   1813206 Nov 26 13:03 log.47523449._007148.job.log.1
[2025-11-26 13:03:05] -rw------- 1 boinc boinc       353 Nov 26 13:03 output.list
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc       620 Nov 26 13:03 runtime_log
[2025-11-26 13:03:05] -rw------- 1 boinc boinc   3368960 Nov 26 13:03 result.tar.gz
[2025-11-26 13:03:05] -rw------- 1 boinc boinc       657 Nov 26 13:03 PoAODmkJMg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmosGKDmS3gUWn.diag
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc      8940 Nov 26 13:03 runtime_log.err
[2025-11-26 13:03:05] -rw-r--r-- 1 boinc boinc     21356 Nov 26 13:03 stderr.txt
[2025-11-26 13:03:05] HITS file was successfully produced:
[2025-11-26 13:03:05] -rw------- 1 boinc boinc 908285237 Nov 26 13:02 shared/HITS.pool.root.1
[2025-11-26 13:03:05]  *** Contents of shared directory: ***
[2025-11-26 13:03:05] total 1290824
[2025-11-26 13:03:05] -rw-r--r-- 2 boinc boinc 411881421 Nov 26 09:35 ATLAS.root_0
[2025-11-26 13:03:05] -rw-r--r-- 2 boinc boinc    590096 Nov 26 09:35 input.tar.gz
[2025-11-26 13:03:05] -rw-r--r-- 2 boinc boinc     15847 Nov 26 09:35 start_atlas.sh
[2025-11-26 13:03:05] -rw------- 1 boinc boinc 908285237 Nov 26 13:02 HITS.pool.root.1
[2025-11-26 13:03:05] -rw------- 1 boinc boinc   3368960 Nov 26 13:03 result.tar.gz
13:03:06 (2493962): run_atlas exited; CPU time 95416.282652
13:03:06 (2493962): called boinc_finish(0)

</stderr_txt>
]]>

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