Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:25 (759521): wrapper (7.7.26015): starting
15:31:25 (759521): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 15:31:25] Arguments: --nthreads 4
[2025-11-27 15:31:25] Threads: 4
[2025-11-27 15:31:25] Checking for CVMFS
[2025-11-27 15:31:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 15:31:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 15:31:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 15:31:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 15:31:25] 2.9.2.0 3057 4994 83452 153368 2 81 35984604 36864001 651 130560 0 2183486 99.983 188826 2686 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 15:31:25] CVMFS is ok
[2025-11-27 15:31:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 15:31:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 15:31:25] Further information can be found at the LHC@home message board.
[2025-11-27 15:31:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 15:31:25] Checking for apptainer binary...
[2025-11-27 15:31:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 15:31:25] Running /usr/bin/apptainer --version
[2025-11-27 15:31:26] apptainer version 1.4.1-1.1
[2025-11-27 15:31:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 15:31:26] thA383a
[2025-11-27 15:31:26] apptainer works
[2025-11-27 15:31:26] Set ATHENA_PROC_NUMBER=4
[2025-11-27 15:31:26] Set ATHENA_CORE_NUMBER=4
[2025-11-27 15:31:26] Starting ATLAS job with PandaID=6895379528
[2025-11-27 15:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:30:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:30:09] 2025-11-27 21:29:12,190 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:12,420 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:12,491 | INFO     | [job] validate thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:12,560 | INFO     | [job] control thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:12,633 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:12,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:12,950 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:13,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:30:09] 2025-11-27 21:29:13,178 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:13,275 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:13,844 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:17,127 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:30:09] 2025-11-27 21:29:41,218 | INFO     | PID=763312 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 22:30:09] 2025-11-27 21:29:41,218 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:30:09] 2025-11-27 21:29:41,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:30:09] 2025-11-27 21:29:41,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:30:09] 2025-11-27 21:30:02,194 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:30:09] 2025-11-27 21:30:04,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725684385600)>', '<ExcThread(monitor, started 139725167892224)>']
[2025-11-27 22:30:09] 2025-11-27 21:30:04,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:30:09] 2025-11-27 21:30:04,338 | INFO     | [monitor] control thread has ended
[2025-11-27 22:30:09] 2025-11-27 21:30:09,038 | INFO     | all workflow threads have been joined
[2025-11-27 22:30:09] 2025-11-27 21:30:09,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:30:09] 2025-11-27 21:30:09,039 | INFO     | traces error code: 0
[2025-11-27 22:30:09] 2025-11-27 21:30:09,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:30:09] 2025-11-27 21:30:09,119 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:30:09] 2025-11-27 21:30:09,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:30:09] 2025-11-27 21:30:09,128 [wrapper] pilotpid: 763312
[2025-11-27 22:30:09] 2025-11-27 21:30:09,132 [wrapper] Pilot exit status: 0
[2025-11-27 22:30:09] 2025-11-27 21:30:09,143 [wrapper] pandaids: 6895379528
[2025-11-27 22:30:09] 2025-11-27 21:30:09,168 [wrapper] cleanup supervisor_pilot  817191 763313
[2025-11-27 22:30:09] 2025-11-27 21:30:09,172 [wrapper] Test setup, not cleaning
[2025-11-27 22:30:09] 2025-11-27 21:30:09,176 [wrapper] apfmon messages muted
[2025-11-27 22:30:09] 2025-11-27 21:30:09,180 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:30:09] 2025-11-27 21:30:09,184 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:30:09]  *** Error codes and diagnostics ***
[2025-11-27 22:30:09]     "exeErrorCode": 0,
[2025-11-27 22:30:09]     "exeErrorDiag": "",
[2025-11-27 22:30:09]     "pilotErrorCode": 0,
[2025-11-27 22:30:09]     "pilotErrorDiag": "",
[2025-11-27 22:30:09]  *** Listing of results directory ***
[2025-11-27 22:30:09] total 1319336
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc    576529 Nov 24 03:14 pilot3.tar.gz
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc      5112 Nov 24 03:22 queuedata.json
[2025-11-27 22:30:09] -rwx------ 1 boinc boinc     36292 Nov 24 03:24 runpilot2-wrapper.sh
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc       100 Nov 27 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:30:09] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 15:31 run_atlas
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc       105 Nov 27 15:31 job.xml
[2025-11-27 22:30:09] -rw-r--r-- 2 boinc boinc 409582952 Nov 27 15:31 EVNT.47483658._000979.pool.root.1
[2025-11-27 22:30:09] -rw-r--r-- 2 boinc boinc    590107 Nov 27 15:31 input.tar.gz
[2025-11-27 22:30:09] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:31 start_atlas.sh
[2025-11-27 22:30:09] drwxrwx--x 2 boinc boinc      4096 Nov 27 15:31 shared
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:31 boinc_setup_complete
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc      6379 Nov 27 15:31 init_data.xml
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc         0 Nov 27 15:31 boinc_lockfile
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc      2785 Nov 27 15:31 pandaJob.out
[2025-11-27 22:30:09] -rw------- 1 boinc boinc    991580 Nov 27 15:31 agis_schedconf.cvmfs.json
[2025-11-27 22:30:09] drwx------ 5 boinc boinc      4096 Nov 27 15:31 pilot3
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc       531 Nov 27 22:24 boinc_task_state.xml
[2025-11-27 22:30:09] -rw------- 1 boinc boinc 927941939 Nov 27 22:28 HITS.47556137._009656.pool.root.1
[2025-11-27 22:30:09] -rw------- 1 boinc boinc        95 Nov 27 22:28 pilot_heartbeat.json
[2025-11-27 22:30:09] -rw------- 1 boinc boinc      1031 Nov 27 22:28 memory_monitor_summary.json
[2025-11-27 22:30:09] -rw------- 1 boinc boinc   1516240 Nov 27 22:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:30:09] -rw------- 1 boinc boinc   1258995 Nov 27 22:29 log.47556137._009656.job.log.tgz.1
[2025-11-27 22:30:09] -rw------- 1 boinc boinc      8571 Nov 27 22:29 heartbeat.json
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc        28 Nov 27 22:30 wrapper_checkpoint.txt
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc      8192 Nov 27 22:30 boinc_mmap_file
[2025-11-27 22:30:09] -rw------- 1 boinc boinc      4937 Nov 27 22:30 pilotlog.txt
[2025-11-27 22:30:09] -rw------- 1 boinc boinc   3527334 Nov 27 22:30 log.47556137._009656.job.log.1
[2025-11-27 22:30:09] -rw------- 1 boinc boinc       353 Nov 27 22:30 output.list
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc       620 Nov 27 22:30 runtime_log
[2025-11-27 22:30:09] -rw------- 1 boinc boinc   4802560 Nov 27 22:30 result.tar.gz
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc      8903 Nov 27 22:30 runtime_log.err
[2025-11-27 22:30:09] -rw------- 1 boinc boinc       666 Nov 27 22:30 OoqMDmTQbh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsLLKDmyySVSo.diag
[2025-11-27 22:30:09] -rw-r--r-- 1 boinc boinc      5947 Nov 27 22:30 stderr.txt
[2025-11-27 22:30:09] HITS file was successfully produced:
[2025-11-27 22:30:09] -rw------- 1 boinc boinc 927941939 Nov 27 22:28 shared/HITS.pool.root.1
[2025-11-27 22:30:09]  *** Contents of shared directory: ***
[2025-11-27 22:30:09] total 1311476
[2025-11-27 22:30:09] -rw-r--r-- 2 boinc boinc 409582952 Nov 27 15:31 ATLAS.root_0
[2025-11-27 22:30:09] -rw-r--r-- 2 boinc boinc    590107 Nov 27 15:31 input.tar.gz
[2025-11-27 22:30:09] -rw-r--r-- 2 boinc boinc     15847 Nov 27 15:31 start_atlas.sh
[2025-11-27 22:30:09] -rw------- 1 boinc boinc 927941939 Nov 27 22:28 HITS.pool.root.1
[2025-11-27 22:30:09] -rw------- 1 boinc boinc   4802560 Nov 27 22:30 result.tar.gz
22:30:10 (759521): run_atlas exited; CPU time 98120.305357
22:30:10 (759521): called boinc_finish(0)

</stderr_txt>
]]>

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