Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:51 (1320152): wrapper (7.7.26015): starting
00:03:51 (1320152): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:51] Arguments: --nthreads 9
[2025-11-25 00:03:51] Threads: 9
[2025-11-25 00:03:51] Checking for CVMFS
[2025-11-25 00:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:54] 2.13.3.0 11561 26468 209208 153270 3 126 30474883 32935936 24886 16776704 0 154521276 99.791 79335295 32105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:54] CVMFS is ok
[2025-11-25 00:03:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:54] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:54] Checking for apptainer binary...
[2025-11-25 00:03:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:54] Running /usr/bin/apptainer --version
[2025-11-25 00:03:54] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:55] c-8-14.aglt2.org
[2025-11-25 00:03:55] apptainer works
[2025-11-25 00:03:55] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:55] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:55] Starting ATLAS job with PandaID=6894053062
[2025-11-25 00:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:54:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:54:02] 2025-11-25 11:49:36,601 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6894053062/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,602 | INFO     | extracted standard info from prmon json
[2025-11-25 08:54:02] 2025-11-25 11:49:36,602 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 08:54:02] 2025-11-25 11:49:36,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 08:54:02] 2025-11-25 11:49:36,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 08:54:02] 2025-11-25 11:49:36,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 08:54:02] 2025-11-25 11:49:36,657 | INFO     | fitting pss+swap vs Time
[2025-11-25 08:54:02] 2025-11-25 11:49:36,658 | INFO     | sum of square deviations: 19255677938.69468
[2025-11-25 08:54:02] 2025-11-25 11:49:36,670 | INFO     | sum of deviations: 146127043655.47226
[2025-11-25 08:54:02] 2025-11-25 11:49:36,683 | INFO     | mean x: 1764059280.0277777
[2025-11-25 08:54:02] 2025-11-25 11:49:36,684 | INFO     | mean y: 2627307.5025252528
[2025-11-25 08:54:02] 2025-11-25 11:49:36,684 | INFO     | intersect: -13384424981.394161
[2025-11-25 08:54:02] 2025-11-25 11:49:36,684 | INFO     | chi2: 3.6192293745723645
[2025-11-25 08:54:02] 2025-11-25 11:49:36,686 | INFO     | sum of square deviations: 18535523527.283905
[2025-11-25 08:54:02] 2025-11-25 11:49:36,691 | INFO     | sum of deviations: 170164558817.4118
[2025-11-25 08:54:02] 2025-11-25 11:49:36,692 | INFO     | mean x: 1764059127.5345268
[2025-11-25 08:54:02] 2025-11-25 11:49:36,692 | INFO     | mean y: 2632340.117647059
[2025-11-25 08:54:02] 2025-11-25 11:49:36,692 | INFO     | intersect: -16192234922.351736
[2025-11-25 08:54:02] 2025-11-25 11:49:36,693 | INFO     | chi2: 2.937703606238643
[2025-11-25 08:54:02] 2025-11-25 11:49:36,693 | INFO     | current chi2=2.937703606238643 (change=18.83068735908037 %)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,693 | INFO     | right removable region: 390
[2025-11-25 08:54:02] 2025-11-25 11:49:36,693 | INFO     | sum of square deviations: 18535419949.35032
[2025-11-25 08:54:02] 2025-11-25 11:49:36,700 | INFO     | sum of deviations: 45254058792.6752
[2025-11-25 08:54:02] 2025-11-25 11:49:36,700 | INFO     | mean x: 1764059432.5319693
[2025-11-25 08:54:02] 2025-11-25 11:49:36,700 | INFO     | mean y: 2648601.265984655
[2025-11-25 08:54:02] 2025-11-25 11:49:36,700 | INFO     | intersect: -4304286417.833657
[2025-11-25 08:54:02] 2025-11-25 11:49:36,701 | INFO     | chi2: 1.1793074614242736
[2025-11-25 08:54:02] 2025-11-25 11:49:36,701 | INFO     | current chi2=1.1793074614242736 (change=67.41550923216586 %)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,702 | INFO     | sum of square deviations: 17833324740.41703
[2025-11-25 08:54:02] 2025-11-25 11:49:36,706 | INFO     | sum of deviations: 6999160401.373051
[2025-11-25 08:54:02] 2025-11-25 11:49:36,706 | INFO     | mean x: 1764059585.03886
[2025-11-25 08:54:02] 2025-11-25 11:49:36,706 | INFO     | mean y: 2656894.5751295337
[2025-11-25 08:54:02] 2025-11-25 11:49:36,707 | INFO     | intersect: -689694990.0559936
[2025-11-25 08:54:02] 2025-11-25 11:49:36,707 | INFO     | chi2: 0.8675639896521401
[2025-11-25 08:54:02] 2025-11-25 11:49:36,707 | INFO     | current chi2=0.8675639896521401 (change=26.434452589287833 %)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,708 | INFO     | sum of square deviations: 17149230082.619347
[2025-11-25 08:54:02] 2025-11-25 11:49:36,713 | INFO     | sum of deviations: -17200626898.67193
[2025-11-25 08:54:02] 2025-11-25 11:49:36,713 | INFO     | mean x: 1764059737.5406823
[2025-11-25 08:54:02] 2025-11-25 11:49:36,713 | INFO     | mean y: 2662277.430446194
[2025-11-25 08:54:02] 2025-11-25 11:49:36,713 | INFO     | intersect: 1772008960.9972382
[2025-11-25 08:54:02] 2025-11-25 11:49:36,714 | INFO     | chi2: 0.7275618696964434
[2025-11-25 08:54:02] 2025-11-25 11:49:36,714 | INFO     | current chi2=0.7275618696964434 (change=16.13738255916225 %)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,714 | INFO     | left removable region: 30
[2025-11-25 08:54:02] 2025-11-25 11:49:36,715 | INFO     | sum of square deviations: 14466888054.88887
[2025-11-25 08:54:02] 2025-11-25 11:49:36,719 | INFO     | sum of deviations: 6590830156.055549
[2025-11-25 08:54:02] 2025-11-25 11:49:36,719 | INFO     | mean x: 1764060012.0555556
[2025-11-25 08:54:02] 2025-11-25 11:49:36,719 | INFO     | mean y: 2668220.047222222
[2025-11-25 08:54:02] 2025-11-25 11:49:36,720 | INFO     | intersect: -801002886.0285883
[2025-11-25 08:54:02] 2025-11-25 11:49:36,721 | INFO     | chi2: 0.02921495865463636
[2025-11-25 08:54:02] 2025-11-25 11:49:36,721 | INFO     | current memory leak: 0.46 B/s (using 360 data points, chi2=0.03)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,722 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | ..............................
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . Timing measurements:
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . get job = 0 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . initial setup = 5 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . payload setup = 43 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . stage-in = 0 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . payload execution = 24145 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . stage-out = 5 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,723 | INFO     | . log creation = 1 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,724 | INFO     | ..............................
[2025-11-25 08:54:02] 2025-11-25 11:49:36,981 | INFO     | 
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | job summary report
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | --------------------------------------------------
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | PanDA job id: 6894053062
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | task id: 47523618
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | errors: (none)
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | pilot state: finished 
[2025-11-25 08:54:02] 2025-11-25 11:49:36,982 | INFO     | transexitcode: 0
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | exeerrorcode: 0
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | exeerrordiag: 
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | exitcode: 0
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | exitmsg: OK
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | cpuconsumptiontime: 88696 s
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | nevents: 400
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | neventsw: 0
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | pid: 1332082
[2025-11-25 08:54:02] 2025-11-25 11:49:36,983 | INFO     | pgrp: 1332082
[2025-11-25 08:54:02] 2025-11-25 11:49:36,984 | INFO     | corecount: 9
[2025-11-25 08:54:02] 2025-11-25 11:49:36,984 | INFO     | event service: False
[2025-11-25 08:54:02] 2025-11-25 11:49:36,984 | INFO     | sizes: {0: 2283708, 1: 2283792, 2: 2283991, 3: 2283991, 14: 2284019, 25: 2284047, 26: 2284465, 35: 2284493, 24193: 2319318, 24194: 2319317, 24201: 2328376, 24204: 
[2025-11-25 08:54:02] 2025-11-25 11:49:36,984 | INFO     | --------------------------------------------------
[2025-11-25 08:54:02] 2025-11-25 11:49:36,984 | INFO     | 
[2025-11-25 08:54:02] 2025-11-25 11:49:36,984 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 08:54:02] 2025-11-25 11:49:37,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:54:02] 2025-11-25 11:49:37,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,055 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:54:02] 2025-11-25 11:49:37,055 | INFO     | job 6894053062 has completed (purged errors)
[2025-11-25 08:54:02] 2025-11-25 11:49:37,055 | INFO     | overall cleanup function is called
[2025-11-25 08:54:02] 2025-11-25 11:49:38,088 | INFO     | --- collectZombieJob: --- 10, [1332082]
[2025-11-25 08:54:02] 2025-11-25 11:49:38,088 | INFO     | zombie collector waiting for pid 1332082
[2025-11-25 08:54:02] 2025-11-25 11:49:38,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:54:02] 2025-11-25 11:49:38,088 | INFO     | collected zombie processes
[2025-11-25 08:54:02] 2025-11-25 11:49:38,088 | INFO     | will attempt to kill all subprocesses of pid=1332082
[2025-11-25 08:54:02] 2025-11-25 11:49:39,102 | INFO     | process IDs to be killed: [1332082] (in reverse order)
[2025-11-25 08:54:02] 2025-11-25 11:49:39,421 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:54:02] 2025-11-25 11:49:39,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:54:02] 2025-11-25 11:49:39,500 | INFO     | did not find any defunct processes belonging to 1332082
[2025-11-25 08:54:02] 2025-11-25 11:49:39,574 | INFO     | did not find any defunct processes belonging to 1332082
[2025-11-25 08:54:02] 2025-11-25 11:49:39,583 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:54:02] 2025-11-25 11:49:39,583 | INFO     | ready for new job
[2025-11-25 08:54:02] 2025-11-25 11:49:39,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:54:02] 2025-11-25 11:49:39,596 | INFO     | ***************************************
[2025-11-25 08:54:02] 2025-11-25 11:49:39,596 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:54:02] 2025-11-25 11:49:39,596 | INFO     | ***************************************
[2025-11-25 08:54:02] 2025-11-25 11:49:39,597 | INFO     | 
[2025-11-25 08:54:02] 2025-11-25 11:49:39,598 | INFO     | architecture information:
[2025-11-25 08:54:02] 2025-11-25 11:49:39,610 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:54:02] 2025-11-25 11:49:39,661 | INFO     | cat /etc/os-release:
[2025-11-25 08:54:02] NAME="CentOS Linux"
[2025-11-25 08:54:02] VERSION="7 (Core)"
[2025-11-25 08:54:02] ID="centos"
[2025-11-25 08:54:02] ID_LIKE="rhel fedora"
[2025-11-25 08:54:02] VERSION_ID="7"
[2025-11-25 08:54:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:54:02] ANSI_COLOR="0;31"
[2025-11-25 08:54:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:54:02] HOME_URL="https://www.centos.org/"
[2025-11-25 08:54:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:54:02] 
[2025-11-25 08:54:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:54:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:54:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:54:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:54:02] 
[2025-11-25 08:54:02] 2025-11-25 11:49:39,661 | INFO     | ***************************************
[2025-11-25 08:54:02] 2025-11-25 11:49:40,165 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 08:54:02] 2025-11-25 11:49:40,305 | INFO     | sufficient remaining disk space (71804387328 B)
[2025-11-25 08:54:02] 2025-11-25 11:49:40,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:54:02] 2025-11-25 11:49:40,306 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:54:02] 2025-11-25 11:49:40,306 | INFO     | update_server=False
[2025-11-25 08:54:02] 2025-11-25 11:49:40,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:54:02] 2025-11-25 11:49:40,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:54:02] 2025-11-25 11:49:40,353 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 08:54:02] 2025-11-25 11:49:40,353 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 08:54:02] 2025-11-25 11:49:40,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:54:02] 2025-11-25 11:49:40,353 | INFO     | will abort loop
[2025-11-25 08:54:02] 2025-11-25 11:49:41,088 | INFO     | all data control threads have been joined
[2025-11-25 08:54:02] 2025-11-25 11:49:41,188 | INFO     | all payload control threads have been joined
[2025-11-25 08:54:02] 2025-11-25 11:49:41,319 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:41,359 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:41,501 | INFO     | all job control threads have been joined
[2025-11-25 08:54:02] 2025-11-25 11:49:41,502 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:41,526 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:41,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:41,921 | INFO     | [job] validate thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:41,921 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:54:02] 2025-11-25 11:49:42,095 | INFO     | [data] control thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,194 | INFO     | [payload] control thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,340 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,440 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,507 | INFO     | [job] control thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,582 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:42,652 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:43,030 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:43,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:54:02] 2025-11-25 11:49:47,361 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:54:02] 2025-11-25 11:49:47,435 [wrapper] supervise_pilot (15 min periods counter: 28)
[2025-11-25 08:54:02] 2025-11-25 11:50:10,473 | INFO     | PID=1324182 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 08:54:02] 2025-11-25 11:50:10,473 | INFO     | .. there are 40 such processes running
[2025-11-25 08:54:02] 2025-11-25 11:50:10,477 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:54:02] 2025-11-25 11:50:10,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:54:02] 2025-11-25 11:50:10,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:54:02] 2025-11-25 11:50:35,148 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:54:02] 2025-11-25 11:50:36,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139872881854272)>', '<ExcThread(monitor, started 139872608163584)>']
[2025-11-25 08:54:02] 2025-11-25 11:50:37,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:54:02] 2025-11-25 11:50:37,847 | INFO     | [monitor] control thread has ended
[2025-11-25 08:54:02] 2025-11-25 11:50:41,896 | INFO     | all workflow threads have been joined
[2025-11-25 08:54:02] 2025-11-25 11:50:41,896 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:54:02] 2025-11-25 11:50:41,896 | INFO     | traces error code: 0
[2025-11-25 08:54:02] 2025-11-25 11:50:41,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:54:02] 2025-11-25 11:50:42,714 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:54:02] 2025-11-25 11:50:42,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:54:02] 2025-11-25 11:50:42,792 [wrapper] pilotpid: 1324182
[2025-11-25 08:54:02] 2025-11-25 11:50:42,810 [wrapper] Pilot exit status: 0
[2025-11-25 08:54:02] 2025-11-25 11:50:42,955 [wrapper] pandaids: 6894053062
[2025-11-25 08:54:02] 2025-11-25 11:50:43,092 [wrapper] cleanup supervisor_pilot 2842455 1324183
[2025-11-25 08:54:02] 2025-11-25 11:50:43,095 [wrapper] Test setup, not cleaning
[2025-11-25 08:54:02] 2025-11-25 11:50:43,098 [wrapper] apfmon messages muted
[2025-11-25 08:54:02] 2025-11-25 11:50:43,100 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:54:02] 2025-11-25 11:50:43,103 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:54:02]  *** Error codes and diagnostics ***
[2025-11-25 08:54:02]     "exeErrorCode": 0,
[2025-11-25 08:54:02]     "exeErrorDiag": "",
[2025-11-25 08:54:02]     "pilotErrorCode": 0,
[2025-11-25 08:54:02]     "pilotErrorDiag": "",
[2025-11-25 08:54:02]  *** Listing of results directory ***
[2025-11-25 08:54:02] total 600548
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 08:42 pilot3.tar.gz
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 08:49 queuedata.json
[2025-11-25 08:54:02] -rwx------. 1 boincer umatlas     36292 Nov 23 08:50 runpilot2-wrapper.sh
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:54:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 08:54:02] -rw-r--r--. 2 boincer umatlas 309903429 Nov 25 00:03 EVNT.47523616._000001.pool.root.1
[2025-11-25 08:54:02] -rw-r--r--. 2 boincer umatlas    589953 Nov 25 00:03 input.tar.gz
[2025-11-25 08:54:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 08:54:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas      2608 Nov 25 00:03 pandaJob.out
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 08:54:02] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas 294009347 Nov 25 06:48 HITS.47523618._000008.pool.root.1
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas       530 Nov 25 06:48 boinc_task_state.xml
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas      1045 Nov 25 06:49 memory_monitor_summary.json
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas   1516240 Nov 25 06:49 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas    590282 Nov 25 06:49 log.47523618._000008.job.log.tgz.1
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas      7809 Nov 25 06:49 heartbeat.json
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas        95 Nov 25 06:50 pilot_heartbeat.json
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas      5010 Nov 25 06:50 pilotlog.txt
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas   2976416 Nov 25 06:50 log.47523618._000008.job.log.1
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas       357 Nov 25 06:50 output.list
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas       620 Nov 25 06:50 runtime_log
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas   3584000 Nov 25 06:50 result.tar.gz
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 06:50 runtime_log.err
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas       659 Nov 25 06:50 CZGKDmXfPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2YIKDmJpxOAn.diag
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas      6658 Nov 25 08:47 init_data.xml
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 08:54 boinc_mmap_file
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas        27 Nov 25 08:54 wrapper_checkpoint.txt
[2025-11-25 08:54:02] -rw-r--r--. 1 boincer umatlas     21301 Nov 25 08:54 stderr.txt
[2025-11-25 08:54:02] HITS file was successfully produced:
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas 294009347 Nov 25 06:48 shared/HITS.pool.root.1
[2025-11-25 08:54:02]  *** Contents of shared directory: ***
[2025-11-25 08:54:02] total 593864
[2025-11-25 08:54:02] -rw-r--r--. 2 boincer umatlas 309903429 Nov 25 00:03 ATLAS.root_0
[2025-11-25 08:54:02] -rw-r--r--. 2 boincer umatlas    589953 Nov 25 00:03 input.tar.gz
[2025-11-25 08:54:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas 294009347 Nov 25 06:48 HITS.pool.root.1
[2025-11-25 08:54:02] -rw-------. 1 boincer umatlas   3584000 Nov 25 06:50 result.tar.gz
08:54:23 (1320152): run_atlas exited; CPU time 89643.152531
08:54:23 (1320152): called boinc_finish(0)

</stderr_txt>
]]>

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