Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:31:41 (2390966): wrapper (7.7.26015): starting
01:31:41 (2390966): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 01:31:41] Arguments: --nthreads 3
[2025-11-25 01:31:41] Threads: 3
[2025-11-25 01:31:41] Checking for CVMFS
[2025-11-25 01:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:31:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:31:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:31:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:31:43] 2.9.2.0 2391162 0 30068 153264 4 1 35077093 36864000 0 130560 0 0 0.000 1291 21516 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 01:31:43] CVMFS is ok
[2025-11-25 01:31:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:31:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:31:43] Further information can be found at the LHC@home message board.
[2025-11-25 01:31:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:31:43] Checking for apptainer binary...
[2025-11-25 01:31:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:31:43] Running /usr/bin/apptainer --version
[2025-11-25 01:31:43] apptainer version 1.4.1-1.1
[2025-11-25 01:31:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:31:44] thA335
[2025-11-25 01:31:44] apptainer works
[2025-11-25 01:31:44] Set ATHENA_PROC_NUMBER=3
[2025-11-25 01:31:44] Set ATHENA_CORE_NUMBER=3
[2025-11-25 01:31:44] Starting ATLAS job with PandaID=6895673619
[2025-11-25 01:31:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:36:06]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | INFO     | sufficient remaining disk space (827357921280 B)
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | INFO     | update_server=False
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:36:06] 2025-11-25 00:35:17,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:36:06] 2025-11-25 00:35:17,470 | INFO     | all job control threads have been joined
[2025-11-25 01:36:06] 2025-11-25 00:35:18,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:36:06] 2025-11-25 00:35:18,098 | INFO     | aborting loop
[2025-11-25 01:36:06] 2025-11-25 00:35:18,191 | INFO     | all data control threads have been joined
[2025-11-25 01:36:06] 2025-11-25 00:35:18,192 | INFO     | all payload control threads have been joined
[2025-11-25 01:36:06] 2025-11-25 00:35:18,301 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:18,302 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:18,476 | INFO     | [job] control thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:18,954 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,022 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,104 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,193 | INFO     | [job] validate thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,193 | INFO     | [data] control thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,198 | INFO     | [payload] control thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,265 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,301 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,308 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,323 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:19,604 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:21,302 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:36:06] 2025-11-25 00:35:48,344 | INFO     | PID=2395242 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 01:36:06] 2025-11-25 00:35:48,345 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:36:06] 2025-11-25 00:35:48,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:36:06] 2025-11-25 00:35:48,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:36:06] 2025-11-25 00:35:59,487 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:36:06] 2025-11-25 00:36:01,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601229231936)>', '<ExcThread(monitor, started 140600519161600)>']
[2025-11-25 01:36:06] 2025-11-25 00:36:01,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:36:06] 2025-11-25 00:36:01,415 | INFO     | [monitor] control thread has ended
[2025-11-25 01:36:06] 2025-11-25 00:36:06,066 | INFO     | all workflow threads have been joined
[2025-11-25 01:36:06] 2025-11-25 00:36:06,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:36:06] 2025-11-25 00:36:06,067 | INFO     | traces error code: 0
[2025-11-25 01:36:06] 2025-11-25 00:36:06,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:36:06] 2025-11-25 00:36:06,113 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:36:06] 2025-11-25 00:36:06,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:36:06] 2025-11-25 00:36:06,119 [wrapper] pilotpid: 2395242
[2025-11-25 01:36:06] 2025-11-25 00:36:06,122 [wrapper] Pilot exit status: 0
[2025-11-25 01:36:06] 2025-11-25 00:36:06,129 [wrapper] pandaids: 6895673619
[2025-11-25 01:36:06] 2025-11-25 00:36:06,146 [wrapper] cleanup supervisor_pilot 2395248 2395243
[2025-11-25 01:36:06] 2025-11-25 00:36:06,149 [wrapper] Test setup, not cleaning
[2025-11-25 01:36:06] 2025-11-25 00:36:06,152 [wrapper] apfmon messages muted
[2025-11-25 01:36:06] 2025-11-25 00:36:06,155 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:36:06] 2025-11-25 00:36:06,158 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:36:06]  *** Error codes and diagnostics ***
[2025-11-25 01:36:06]     "exeErrorCode": 65,
[2025-11-25 01:36:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 01:36:06]     "pilotErrorCode": 1305,
[2025-11-25 01:36:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 01:36:06]  *** Listing of results directory ***
[2025-11-25 01:36:06] total 406272
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc    576529 Nov 24 13:18 pilot3.tar.gz
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc      5112 Nov 24 13:56 queuedata.json
[2025-11-25 01:36:06] -rwx------ 1 boinc boinc     36292 Nov 24 13:58 runpilot2-wrapper.sh
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc       100 Nov 25 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:36:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 01:31 run_atlas
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc       105 Nov 25 01:31 job.xml
[2025-11-25 01:36:06] -rw-r--r-- 2 boinc boinc 411822975 Nov 25 01:31 EVNT.47483658._001343.pool.root.1
[2025-11-25 01:36:06] -rw-r--r-- 2 boinc boinc    590110 Nov 25 01:31 input.tar.gz
[2025-11-25 01:36:06] -rw-r--r-- 2 boinc boinc     15847 Nov 25 01:31 start_atlas.sh
[2025-11-25 01:36:06] drwxrwx--x 2 boinc boinc      4096 Nov 25 01:31 shared
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc         0 Nov 25 01:31 boinc_setup_complete
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc      6196 Nov 25 01:31 init_data.xml
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc         0 Nov 25 01:31 boinc_lockfile
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc      2786 Nov 25 01:31 pandaJob.out
[2025-11-25 01:36:06] -rw------- 1 boinc boinc    991801 Nov 25 01:31 agis_schedconf.cvmfs.json
[2025-11-25 01:36:06] -rw------- 1 boinc boinc   1516227 Nov 25 01:31 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:36:06] drwx------ 5 boinc boinc      4096 Nov 25 01:31 pilot3
[2025-11-25 01:36:06] -rw------- 1 boinc boinc       955 Nov 25 01:33 memory_monitor_summary.json
[2025-11-25 01:36:06] -rw------- 1 boinc boinc     55889 Nov 25 01:33 log.47556149._003294.job.log.tgz.1
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc       522 Nov 25 01:33 boinc_task_state.xml
[2025-11-25 01:36:06] -rw------- 1 boinc boinc        95 Nov 25 01:35 pilot_heartbeat.json
[2025-11-25 01:36:06] -rw------- 1 boinc boinc      8414 Nov 25 01:35 heartbeat.json
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc      8192 Nov 25 01:35 boinc_mmap_file
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc        22 Nov 25 01:35 wrapper_checkpoint.txt
[2025-11-25 01:36:06] -rw------- 1 boinc boinc      4752 Nov 25 01:36 pilotlog.txt
[2025-11-25 01:36:06] -rw------- 1 boinc boinc     93495 Nov 25 01:36 log.47556149._003294.job.log.1
[2025-11-25 01:36:06] -rw------- 1 boinc boinc       186 Nov 25 01:36 output.list
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc       620 Nov 25 01:36 runtime_log
[2025-11-25 01:36:06] -rw------- 1 boinc boinc    174080 Nov 25 01:36 result.tar.gz
[2025-11-25 01:36:06] -rw------- 1 boinc boinc       648 Nov 25 01:36 zqHKDmqKlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7gLKDm5rEHAn.diag
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc      8744 Nov 25 01:36 runtime_log.err
[2025-11-25 01:36:06] -rw-r--r-- 1 boinc boinc      8116 Nov 25 01:36 stderr.txt
[2025-11-25 01:36:06] No HITS result produced
[2025-11-25 01:36:06]  *** Contents of shared directory: ***
[2025-11-25 01:36:06] total 402944
[2025-11-25 01:36:06] -rw-r--r-- 2 boinc boinc 411822975 Nov 25 01:31 ATLAS.root_0
[2025-11-25 01:36:06] -rw-r--r-- 2 boinc boinc    590110 Nov 25 01:31 input.tar.gz
[2025-11-25 01:36:06] -rw-r--r-- 2 boinc boinc     15847 Nov 25 01:31 start_atlas.sh
[2025-11-25 01:36:06] -rw------- 1 boinc boinc    174080 Nov 25 01:36 result.tar.gz
01:36:07 (2390966): run_atlas exited; CPU time 31.937703
01:36:07 (2390966): called boinc_finish(0)

</stderr_txt>
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