Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:49:25 (3600449): wrapper (7.7.26015): starting
23:49:25 (3600449): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:49:25] Arguments: --nthreads 8
[2025-11-24 23:49:25] Threads: 8
[2025-11-24 23:49:25] Checking for CVMFS
[2025-11-24 23:49:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:49:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:49:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:49:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:49:27] 2.13.3.0 42195 28010 337168 153270 2 122 28255482 32935937 30361 16776704 0 165476780 99.783 97518557 33428 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 23:49:27] CVMFS is ok
[2025-11-24 23:49:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:49:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:49:27] Further information can be found at the LHC@home message board.
[2025-11-24 23:49:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:49:27] Checking for apptainer binary...
[2025-11-24 23:49:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:49:27] Running /usr/bin/apptainer --version
[2025-11-24 23:49:27] apptainer version 1.4.4-1.el9
[2025-11-24 23:49:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:49:27] c-6-3.aglt2.org
[2025-11-24 23:49:27] apptainer works
[2025-11-24 23:49:28] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:49:28] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:49:28] Starting ATLAS job with PandaID=6895363936
[2025-11-24 23:49:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:18:22]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:18:22] 2025-11-26 00:17:13,370 | INFO     | monitor loop #4635: job 0:6895363936 is in state 'finished'
[2025-11-25 19:18:22] 2025-11-26 00:17:13,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,698 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 19:18:22] 2025-11-26 00:17:14,707 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2133750000003
[2025-11-25 19:18:22] 2025-11-26 00:17:14,714 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895363936/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,715 | INFO     | extracted standard info from prmon json
[2025-11-25 19:18:22] 2025-11-26 00:17:14,715 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:18:22] 2025-11-26 00:17:14,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:18:22] 2025-11-26 00:17:14,737 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:18:22] 2025-11-26 00:17:14,739 | INFO     | sum of square deviations: 467903381109.57794
[2025-11-25 19:18:22] 2025-11-26 00:17:14,778 | INFO     | sum of deviations: 3309731499783.8687
[2025-11-25 19:18:22] 2025-11-26 00:17:14,779 | INFO     | mean x: 1764081255.8840454
[2025-11-25 19:18:22] 2025-11-26 00:17:14,779 | INFO     | mean y: 2921401.8561464692
[2025-11-25 19:18:22] 2025-11-26 00:17:14,779 | INFO     | intersect: -12475371204.049103
[2025-11-25 19:18:22] 2025-11-26 00:17:14,781 | INFO     | chi2: 9.199625385721244
[2025-11-25 19:18:22] 2025-11-26 00:17:14,782 | INFO     | sum of square deviations: 461811101723.15314
[2025-11-25 19:18:22] 2025-11-26 00:17:14,818 | INFO     | sum of deviations: 3706729625833.3257
[2025-11-25 19:18:22] 2025-11-26 00:17:14,819 | INFO     | mean x: 1764081103.3879158
[2025-11-25 19:18:22] 2025-11-26 00:17:14,819 | INFO     | mean y: 2931337.588441331
[2025-11-25 19:18:22] 2025-11-26 00:17:14,819 | INFO     | intersect: -14156476402.723347
[2025-11-25 19:18:22] 2025-11-26 00:17:14,821 | INFO     | chi2: 5.942849332572109
[2025-11-25 19:18:22] 2025-11-26 00:17:14,821 | INFO     | current chi2=5.942849332572109 (change=35.40118120683461 %)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,823 | INFO     | sum of square deviations: 455771939611.69385
[2025-11-25 19:18:22] 2025-11-26 00:17:14,863 | INFO     | sum of deviations: 3927792051918.812
[2025-11-25 19:18:22] 2025-11-26 00:17:14,863 | INFO     | mean x: 1764080950.8918207
[2025-11-25 19:18:22] 2025-11-26 00:17:14,863 | INFO     | mean y: 2936914.3887423044
[2025-11-25 19:18:22] 2025-11-26 00:17:14,863 | INFO     | intersect: -15199717166.855394
[2025-11-25 19:18:22] 2025-11-26 00:17:14,865 | INFO     | chi2: 4.64725499131553
[2025-11-25 19:18:22] 2025-11-26 00:17:14,865 | INFO     | current chi2=4.64725499131553 (change=21.80089497062575 %)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,865 | INFO     | right removable region: 1136
[2025-11-25 19:18:22] 2025-11-26 00:17:14,867 | INFO     | sum of square deviations: 461810483183.15344
[2025-11-25 19:18:22] 2025-11-26 00:17:14,904 | INFO     | sum of deviations: 2878608388777.618
[2025-11-25 19:18:22] 2025-11-26 00:17:14,904 | INFO     | mean x: 1764081408.3879158
[2025-11-25 19:18:22] 2025-11-26 00:17:14,905 | INFO     | mean y: 2932189.754816112
[2025-11-25 19:18:22] 2025-11-26 00:17:14,905 | INFO     | intersect: -10993135949.863665
[2025-11-25 19:18:22] 2025-11-26 00:17:14,906 | INFO     | chi2: 5.702529771200796
[2025-11-25 19:18:22] 2025-11-26 00:17:14,907 | INFO     | current chi2=5.702529771200796 (change=38.01345672127364 %)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,908 | INFO     | sum of square deviations: 455770772072.47644
[2025-11-25 19:18:22] 2025-11-26 00:17:14,943 | INFO     | sum of deviations: 2693808247562.2075
[2025-11-25 19:18:22] 2025-11-26 00:17:14,944 | INFO     | mean x: 1764081560.8909411
[2025-11-25 19:18:22] 2025-11-26 00:17:14,944 | INFO     | mean y: 2936850.91292876
[2025-11-25 19:18:22] 2025-11-26 00:17:14,944 | INFO     | intersect: -10423570835.158598
[2025-11-25 19:18:22] 2025-11-26 00:17:14,945 | INFO     | chi2: 5.080942804096989
[2025-11-25 19:18:22] 2025-11-26 00:17:14,945 | INFO     | current chi2=5.080942804096989 (change=10.900196790606453 %)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,946 | INFO     | left removable region: 20
[2025-11-25 19:18:22] 2025-11-26 00:17:14,947 | INFO     | sum of square deviations: 430980258234.35406
[2025-11-25 19:18:22] 2025-11-26 00:17:14,980 | INFO     | sum of deviations: 3209667829242.4478
[2025-11-25 19:18:22] 2025-11-26 00:17:14,981 | INFO     | mean x: 1764081530.4023297
[2025-11-25 19:18:22] 2025-11-26 00:17:14,981 | INFO     | mean y: 2956703.5958781363
[2025-11-25 19:18:22] 2025-11-26 00:17:14,981 | INFO     | intersect: -13134804546.744858
[2025-11-25 19:18:22] 2025-11-26 00:17:14,982 | INFO     | chi2: 0.3560561578393022
[2025-11-25 19:18:22] 2025-11-26 00:17:14,983 | INFO     | current memory leak: 7.45 B/s (using 1116 data points, chi2=0.36)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,984 | INFO     | could have reported an average CPU frequency of 2600 MHz (42 samples)
[2025-11-25 19:18:22] 2025-11-26 00:17:14,984 | INFO     | ..............................
[2025-11-25 19:18:22] 2025-11-26 00:17:14,984 | INFO     | . Timing measurements:
[2025-11-25 19:18:22] 2025-11-26 00:17:14,984 | INFO     | . get job = 0 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,984 | INFO     | . initial setup = 4 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,984 | INFO     | . payload setup = 23 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,985 | INFO     | . stage-in = 0 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,985 | INFO     | . payload execution = 69934 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,985 | INFO     | . stage-out = 4 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,985 | INFO     | . log creation = 0 s
[2025-11-25 19:18:22] 2025-11-26 00:17:14,985 | INFO     | ..............................
[2025-11-25 19:18:22] 2025-11-26 00:17:15,091 | INFO     | 
[2025-11-25 19:18:22] 2025-11-26 00:17:15,091 | INFO     | job summary report
[2025-11-25 19:18:22] 2025-11-26 00:17:15,091 | INFO     | --------------------------------------------------
[2025-11-25 19:18:22] 2025-11-26 00:17:15,091 | INFO     | PanDA job id: 6895363936
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | task id: 47556137
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | errors: (none)
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | pilot state: finished 
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | transexitcode: 0
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | exeerrorcode: 0
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | exeerrordiag: 
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | exitcode: 0
[2025-11-25 19:18:22] 2025-11-26 00:17:15,092 | INFO     | exitmsg: OK
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | cpuconsumptiontime: 300102 s
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | nevents: 1000
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | neventsw: 0
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | pid: 3613332
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | pgrp: 3613332
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | corecount: 8
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | event service: False
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284366, 13: 2284366, 20: 2284684, 24: 2284712, 69961: 2344035, 69967: 2353034, 69968: 2353090, 69979: 2353336}
[2025-11-25 19:18:22] 2025-11-26 00:17:15,093 | INFO     | --------------------------------------------------
[2025-11-25 19:18:22] 2025-11-26 00:17:15,094 | INFO     | 
[2025-11-25 19:18:22] 2025-11-26 00:17:15,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 19:18:22] 2025-11-26 00:17:15,113 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:18:22] 2025-11-26 00:17:15,116 | INFO     | job 6895363936 has completed (purged errors)
[2025-11-25 19:18:22] 2025-11-26 00:17:15,117 | INFO     | overall cleanup function is called
[2025-11-25 19:18:22] 2025-11-26 00:17:16,134 | INFO     | --- collectZombieJob: --- 10, [3613332]
[2025-11-25 19:18:22] 2025-11-26 00:17:16,134 | INFO     | zombie collector waiting for pid 3613332
[2025-11-25 19:18:22] 2025-11-26 00:17:16,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:18:22] 2025-11-26 00:17:16,135 | INFO     | collected zombie processes
[2025-11-25 19:18:22] 2025-11-26 00:17:16,135 | INFO     | will attempt to kill all subprocesses of pid=3613332
[2025-11-25 19:18:22] 2025-11-26 00:17:16,657 | INFO     | process IDs to be killed: [3613332] (in reverse order)
[2025-11-25 19:18:22] 2025-11-26 00:17:16,827 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:18:22] 2025-11-26 00:17:16,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:18:22] 2025-11-26 00:17:16,842 | INFO     | did not find any defunct processes belonging to 3613332
[2025-11-25 19:18:22] 2025-11-26 00:17:16,858 | INFO     | did not find any defunct processes belonging to 3613332
[2025-11-25 19:18:22] 2025-11-26 00:17:16,860 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:18:22] 2025-11-26 00:17:16,860 | INFO     | ready for new job
[2025-11-25 19:18:22] 2025-11-26 00:17:16,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:18:22] 2025-11-26 00:17:16,865 | INFO     | ***************************************
[2025-11-25 19:18:22] 2025-11-26 00:17:16,866 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:18:22] 2025-11-26 00:17:16,866 | INFO     | ***************************************
[2025-11-25 19:18:22] 2025-11-26 00:17:16,866 | INFO     | 
[2025-11-25 19:18:22] 2025-11-26 00:17:16,868 | INFO     | architecture information:
[2025-11-25 19:18:22] 2025-11-26 00:17:16,870 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:18:22] 2025-11-26 00:17:16,890 | INFO     | cat /etc/os-release:
[2025-11-25 19:18:22] NAME="CentOS Linux"
[2025-11-25 19:18:22] VERSION="7 (Core)"
[2025-11-25 19:18:22] ID="centos"
[2025-11-25 19:18:22] ID_LIKE="rhel fedora"
[2025-11-25 19:18:22] VERSION_ID="7"
[2025-11-25 19:18:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:18:22] ANSI_COLOR="0;31"
[2025-11-25 19:18:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:18:22] HOME_URL="https://www.centos.org/"
[2025-11-25 19:18:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:18:22] 
[2025-11-25 19:18:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:18:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:18:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:18:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:18:22] 
[2025-11-25 19:18:22] 2025-11-26 00:17:16,890 | INFO     | ***************************************
[2025-11-25 19:18:22] 2025-11-26 00:17:17,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 19:18:22] 2025-11-26 00:17:17,412 | INFO     | sufficient remaining disk space (72364326912 B)
[2025-11-25 19:18:22] 2025-11-26 00:17:17,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:18:22] 2025-11-26 00:17:17,412 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:18:22] 2025-11-26 00:17:17,413 | INFO     | update_server=False
[2025-11-25 19:18:22] 2025-11-26 00:17:17,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:18:22] 2025-11-26 00:17:17,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:18:22] 2025-11-26 00:17:17,413 | INFO     | aborting loop
[2025-11-25 19:18:22] 2025-11-26 00:17:18,246 | INFO     | all data control threads have been joined
[2025-11-25 19:18:22] 2025-11-26 00:17:18,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:18:22] 2025-11-26 00:17:18,387 | INFO     | all job control threads have been joined
[2025-11-25 19:18:22] 2025-11-26 00:17:18,425 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:18,431 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:18,489 | INFO     | all payload control threads have been joined
[2025-11-25 19:18:22] 2025-11-26 00:17:18,559 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:18,612 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:18,613 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:18,633 | INFO     | [job] validate thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:19,252 | INFO     | [data] control thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:19,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:18:22] 2025-11-26 00:17:19,393 | INFO     | [job] control thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:19,496 | INFO     | [payload] control thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:19,631 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:19,763 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:19,789 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:20,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:18:22] 2025-11-26 00:17:20,358 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:21,144 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:23,364 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:27,700 | INFO     | job.realtimelogging is not enabled
[2025-11-25 19:18:22] 2025-11-26 00:17:28,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:18:22] 2025-11-26 00:17:47,047 | INFO     | PID=3605501 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 19:18:22] 2025-11-26 00:17:47,048 | INFO     | .. there are 42 such processes running
[2025-11-25 19:18:22] 2025-11-26 00:17:47,049 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:18:22] 2025-11-26 00:17:47,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:18:22] 2025-11-26 00:17:47,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:18:22] 2025-11-26 00:18:15,009 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:18:22] 2025-11-26 00:18:16,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972852414272)>', '<ExcThread(monitor, started 139971767822080)>']
[2025-11-25 19:18:22] 2025-11-26 00:18:17,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:18:22] 2025-11-26 00:18:17,245 | INFO     | [monitor] control thread has ended
[2025-11-25 19:18:22] 2025-11-26 00:18:21,272 | INFO     | all workflow threads have been joined
[2025-11-25 19:18:22] 2025-11-26 00:18:21,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:18:22] 2025-11-26 00:18:21,272 | INFO     | traces error code: 0
[2025-11-25 19:18:22] 2025-11-26 00:18:21,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:18:22] 2025-11-26 00:18:21,690 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:18:22] 2025-11-26 00:18:21,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:18:22] 2025-11-26 00:18:21,706 [wrapper] pilotpid: 3605501
[2025-11-25 19:18:22] 2025-11-26 00:18:21,729 [wrapper] Pilot exit status: 0
[2025-11-25 19:18:22] 2025-11-26 00:18:21,745 [wrapper] pandaids: 6895363936
[2025-11-25 19:18:22] 2025-11-26 00:18:21,878 [wrapper] cleanup supervisor_pilot 3651906 3605503
[2025-11-25 19:18:22] 2025-11-26 00:18:21,883 [wrapper] Test setup, not cleaning
[2025-11-25 19:18:22] 2025-11-26 00:18:21,886 [wrapper] apfmon messages muted
[2025-11-25 19:18:22] 2025-11-26 00:18:21,889 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:18:22] 2025-11-26 00:18:21,891 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:18:22]  *** Error codes and diagnostics ***
[2025-11-25 19:18:22]     "exeErrorCode": 0,
[2025-11-25 19:18:22]     "exeErrorDiag": "",
[2025-11-25 19:18:22]     "pilotErrorCode": 0,
[2025-11-25 19:18:22]     "pilotErrorDiag": "",
[2025-11-25 19:18:22]  *** Listing of results directory ***
[2025-11-25 19:18:22] total 1318984
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 10:18 pilot3.tar.gz
[2025-11-25 19:18:22] -rwx------. 1 boincer umatlas     36292 Nov 23 10:41 runpilot2-wrapper.sh
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 10:41 queuedata.json
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas       100 Nov 24 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:18:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 23:49 run_atlas
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas       105 Nov 24 23:49 job.xml
[2025-11-25 19:18:22] -rw-r--r--. 2 boincer umatlas 410139330 Nov 24 23:49 EVNT.47483658._000800.pool.root.1
[2025-11-25 19:18:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 23:49 start_atlas.sh
[2025-11-25 19:18:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 23:49 shared
[2025-11-25 19:18:22] -rw-r--r--. 2 boincer umatlas    590104 Nov 24 23:49 input.tar.gz
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas         0 Nov 24 23:49 boinc_lockfile
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 23:49 pandaJob.out
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas        57 Nov 24 23:49 setup.sh.local
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas    991801 Nov 24 23:50 agis_schedconf.cvmfs.json
[2025-11-25 19:18:22] drwx------. 5 boincer umatlas      4096 Nov 24 23:50 pilot3
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:02 boinc_task_state.xml
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas      6656 Nov 25 19:13 init_data.xml
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas 913194135 Nov 25 19:16 HITS.47556137._007864.pool.root.1
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas      1059 Nov 25 19:16 memory_monitor_summary.json
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:17 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas   2290717 Nov 25 19:17 log.47556137._007864.job.log.tgz.1
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas      8625 Nov 25 19:17 heartbeat.json
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas        95 Nov 25 19:17 pilot_heartbeat.json
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 19:18 boinc_mmap_file
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas        29 Nov 25 19:18 wrapper_checkpoint.txt
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas      4896 Nov 25 19:18 pilotlog.txt
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas   9399084 Nov 25 19:18 log.47556137._007864.job.log.1
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas       353 Nov 25 19:18 output.list
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:18 runtime_log
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas  11714560 Nov 25 19:18 result.tar.gz
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 19:18 runtime_log.err
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas       657 Nov 25 19:18 iXWLDmQORh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWcIKDmKsmKtm.diag
[2025-11-25 19:18:22] -rw-r--r--. 1 boincer umatlas     21343 Nov 25 19:18 stderr.txt
[2025-11-25 19:18:22] HITS file was successfully produced:
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas 913194135 Nov 25 19:16 shared/HITS.pool.root.1
[2025-11-25 19:18:22]  *** Contents of shared directory: ***
[2025-11-25 19:18:22] total 1304364
[2025-11-25 19:18:22] -rw-r--r--. 2 boincer umatlas 410139330 Nov 24 23:49 ATLAS.root_0
[2025-11-25 19:18:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 23:49 start_atlas.sh
[2025-11-25 19:18:22] -rw-r--r--. 2 boincer umatlas    590104 Nov 24 23:49 input.tar.gz
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas 913194135 Nov 25 19:16 HITS.pool.root.1
[2025-11-25 19:18:22] -rw-------. 1 boincer umatlas  11714560 Nov 25 19:18 result.tar.gz
19:18:23 (3600449): run_atlas exited; CPU time 302303.917683
19:18:23 (3600449): called boinc_finish(0)

</stderr_txt>
]]>

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