Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:27:47 (2835582): wrapper (7.7.26015): starting
16:27:47 (2835582): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 16:27:47] Arguments: --nthreads 12
[2025-11-24 16:27:47] Threads: 12
[2025-11-24 16:27:47] Checking for CVMFS
[2025-11-24 16:27:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:27:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:27:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:27:48] 2.11.5.0 3627452 25914 145356 153264 0 51 43424423 45568000 16975 130560 0 252178868 99.804 147645045 27588 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-24 16:27:48] CVMFS is ok
[2025-11-24 16:27:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:27:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:27:48] Further information can be found at the LHC@home message board.
[2025-11-24 16:27:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:27:48] Checking for apptainer binary...
[2025-11-24 16:27:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:27:48] Running /usr/bin/apptainer --version
[2025-11-24 16:27:48] apptainer version 1.4.1-1.el9
[2025-11-24 16:27:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:27:49] wns0050.triumf.lcg
[2025-11-24 16:27:49] apptainer works
[2025-11-24 16:27:49] Set ATHENA_PROC_NUMBER=12
[2025-11-24 16:27:49] Set ATHENA_CORE_NUMBER=12
[2025-11-24 16:27:49] Starting ATLAS job with PandaID=6895651774
[2025-11-24 16:27:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:35:36]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | wrong length of table data, x=[1764030591.0, 1764030652.0, 1764030713.0], y=[1506.0, 589372.0, 610566.0] (must be same and length>=4)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,532 | INFO     | could have reported an average CPU frequency of 2544 MHz (4 samples)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | ..............................
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . Timing measurements:
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . get job = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . initial setup = 3 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . payload setup = 24 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . stage-in = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . payload execution = 154 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . stage-out = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . log creation = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | ..............................
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895651774/pilotlog.txt
[2025-11-24 16:35:36] 2025-11-25 00:34:29,598 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 16:35:36] - Log from pilotlog.txt -
[2025-11-24 16:35:36] 2025-11-25 00:34:29,517 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895651774/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,518 | INFO     | extracted standard info from prmon json
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | wrong length of table data, x=[1764030591.0, 1764030652.0, 1764030713.0], y=[1506.0, 589372.0, 610566.0] (must be same and length>=4)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,532 | INFO     | could have reported an average CPU frequency of 2544 MHz (4 samples)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | ..............................
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . Timing measurements:
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . get job = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . initial setup = 3 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . payload setup = 24 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . stage-in = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . payload execution = 154 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . stage-out = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . log creation = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | ..............................
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895651774/pilotlog.txt
[2025-11-24 16:35:36] 2025-11-25 00:34:29,598 | WARNING  | 
[2025-11-24 16:35:36] [begin log extracts]
[2025-11-24 16:35:36] - Log from pilotlog.txt -
[2025-11-24 16:35:36] 2025-11-25 00:34:29,517 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895651774/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,518 | INFO     | extracted standard info from prmon json
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 16:35:36] 2025-11-25 00:34:29,519 | WARNING  | wrong length of table data, x=[1764030591.0, 1764030652.0, 1764030713.0], y=[1506.0, 589372.0, 610566.0] (must be same and length>=4)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,532 | INFO     | could have reported an average CPU frequency of 2544 MHz (4 samples)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | ..............................
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . Timing measurements:
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . get job = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . initial setup = 3 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . payload setup = 24 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . stage-in = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . payload execution = 154 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . stage-out = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | . log creation = 0 s
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | ..............................
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 16:35:36] 2025-11-25 00:34:29,533 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895651774/pilotlog.txt
[2025-11-24 16:35:36] [end log extracts]
[2025-11-24 16:35:36] 2025-11-25 00:34:29,598 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 16:35:36] 2025-11-25 00:34:29,599 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 16:35:36] 2025-11-25 00:34:29,621 | INFO     | time since job start (360s) is within the limit (172800.0s)
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | 
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | job summary report
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | --------------------------------------------------
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | PanDA job id: 6895651774
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | task id: 47556149
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 16:32:03,266 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | pilot state: failed 
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | transexitcode: 65
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | exeerrorcode: 65
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | exitcode: 65
[2025-11-24 16:35:36] 2025-11-25 00:34:30,024 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | cpuconsumptiontime: 44 s
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | nevents: 0
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | neventsw: 0
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | pid: 2845963
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | pgrp: 2845963
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | corecount: 12
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | event service: False
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | sizes: {0: 2284080, 1: 2284164, 2: 2284164, 3: 2284391, 15: 2284391, 25: 2284681, 26: 2284837, 183: 2310262, 184: 2314580, 321: 2314718}
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | --------------------------------------------------
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | 
[2025-11-24 16:35:36] 2025-11-25 00:34:30,025 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 16:35:36] 2025-11-25 00:34:30,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,103 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:35:36] 2025-11-25 00:34:30,104 | INFO     | job 6895651774 has completed (purged errors)
[2025-11-24 16:35:36] 2025-11-25 00:34:30,105 | INFO     | overall cleanup function is called
[2025-11-24 16:35:36] 2025-11-25 00:34:31,152 | INFO     | --- collectZombieJob: --- 10, [2845963]
[2025-11-24 16:35:36] 2025-11-25 00:34:31,152 | INFO     | zombie collector waiting for pid 2845963
[2025-11-24 16:35:36] 2025-11-25 00:34:31,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:35:36] 2025-11-25 00:34:31,152 | INFO     | collected zombie processes
[2025-11-24 16:35:36] 2025-11-25 00:34:31,152 | INFO     | will attempt to kill all subprocesses of pid=2845963
[2025-11-24 16:35:36] 2025-11-25 00:34:32,140 | INFO     | process IDs to be killed: [2845963] (in reverse order)
[2025-11-24 16:35:36] 2025-11-25 00:34:32,617 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:35:36] 2025-11-25 00:34:32,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:35:36] 2025-11-25 00:34:32,624 | INFO     | did not find any defunct processes belonging to 2845963
[2025-11-24 16:35:36] 2025-11-25 00:34:32,631 | INFO     | did not find any defunct processes belonging to 2845963
[2025-11-24 16:35:36] 2025-11-25 00:34:32,632 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:35:36] 2025-11-25 00:34:32,632 | INFO     | ready for new job
[2025-11-24 16:35:36] 2025-11-25 00:34:32,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:35:36] 2025-11-25 00:34:32,633 | INFO     | ***************************************
[2025-11-24 16:35:36] 2025-11-25 00:34:32,633 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:35:36] 2025-11-25 00:34:32,633 | INFO     | ***************************************
[2025-11-24 16:35:36] 2025-11-25 00:34:32,633 | INFO     | 
[2025-11-24 16:35:36] 2025-11-25 00:34:32,635 | INFO     | architecture information:
[2025-11-24 16:35:36] 2025-11-25 00:34:32,636 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:35:36] 2025-11-25 00:34:32,648 | INFO     | cat /etc/os-release:
[2025-11-24 16:35:36] NAME="CentOS Linux"
[2025-11-24 16:35:36] VERSION="7 (Core)"
[2025-11-24 16:35:36] ID="centos"
[2025-11-24 16:35:36] ID_LIKE="rhel fedora"
[2025-11-24 16:35:36] VERSION_ID="7"
[2025-11-24 16:35:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:35:36] ANSI_COLOR="0;31"
[2025-11-24 16:35:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:35:36] HOME_URL="https://www.centos.org/"
[2025-11-24 16:35:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:35:36] 
[2025-11-24 16:35:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:35:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:35:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:35:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:35:36] 
[2025-11-24 16:35:36] 2025-11-25 00:34:32,648 | INFO     | ***************************************
[2025-11-24 16:35:36] 2025-11-25 00:34:33,152 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 16:35:36] 2025-11-25 00:34:33,245 | INFO     | sufficient remaining disk space (1854724374528 B)
[2025-11-24 16:35:36] 2025-11-25 00:34:33,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:35:36] 2025-11-25 00:34:33,245 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:35:36] 2025-11-25 00:34:33,246 | INFO     | update_server=False
[2025-11-24 16:35:36] 2025-11-25 00:34:33,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:35:36] 2025-11-25 00:34:33,273 | INFO     | all payload control threads have been joined
[2025-11-24 16:35:36] 2025-11-25 00:34:33,812 | INFO     | all data control threads have been joined
[2025-11-24 16:35:36] 2025-11-25 00:34:33,998 | INFO     | all job control threads have been joined
[2025-11-24 16:35:36] 2025-11-25 00:34:34,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:35:36] 2025-11-25 00:34:34,047 | INFO     | aborting loop
[2025-11-24 16:35:36] 2025-11-25 00:34:34,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:35:36] 2025-11-25 00:34:34,252 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:34,279 | INFO     | [payload] control thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:34,290 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:34,701 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:34,792 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:34,818 | INFO     | [data] control thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:34,937 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:35,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:35:36] 2025-11-25 00:34:35,013 | INFO     | [job] control thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:35,014 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:35,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:35:36] 2025-11-25 00:34:35,053 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:35,352 | INFO     | [job] validate thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:35,558 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:35,746 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:36,037 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:36,252 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:34:39,017 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:35:36] 2025-11-25 00:35:03,031 | INFO     | PID=2839308 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 16:35:36] 2025-11-25 00:35:03,031 | INFO     | .. there are 21 such processes running
[2025-11-24 16:35:36] 2025-11-25 00:35:03,032 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:35:36] 2025-11-25 00:35:03,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:35:36] 2025-11-25 00:35:03,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:35:36] 2025-11-25 00:35:30,009 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:35:36] 2025-11-25 00:35:30,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152062048064)>', '<ExcThread(monitor, started 140151082706688)>']
[2025-11-24 16:35:36] 2025-11-25 00:35:31,231 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:35:36] 2025-11-25 00:35:31,231 | INFO     | [monitor] control thread has ended
[2025-11-24 16:35:36] 2025-11-25 00:35:35,697 | INFO     | all workflow threads have been joined
[2025-11-24 16:35:36] 2025-11-25 00:35:35,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:35:36] 2025-11-25 00:35:35,697 | INFO     | traces error code: 0
[2025-11-24 16:35:36] 2025-11-25 00:35:35,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:35:36] 2025-11-25 00:35:36,007 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:35:36] 2025-11-25 00:35:36,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:35:36] 2025-11-25 00:35:36,011 [wrapper] pilotpid: 2839308
[2025-11-24 16:35:36] 2025-11-25 00:35:36,013 [wrapper] Pilot exit status: 0
[2025-11-24 16:35:36] 2025-11-25 00:35:36,084 [wrapper] pandaids: 6895651774
[2025-11-24 16:35:36] 2025-11-25 00:35:36,198 [wrapper] cleanup supervisor_pilot 2839314 2839309
[2025-11-24 16:35:36] 2025-11-25 00:35:36,201 [wrapper] Test setup, not cleaning
[2025-11-24 16:35:36] 2025-11-25 00:35:36,203 [wrapper] apfmon messages muted
[2025-11-24 16:35:36] 2025-11-25 00:35:36,205 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:35:36] 2025-11-25 00:35:36,207 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:35:36]  *** Error codes and diagnostics ***
[2025-11-24 16:35:36]     "exeErrorCode": 65,
[2025-11-24 16:35:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 16:35:36]     "pilotErrorCode": 1305,
[2025-11-24 16:35:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 16:35:36]  *** Listing of results directory ***
[2025-11-24 16:35:36] total 404956
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc    576529 Nov 24 04:18 pilot3.tar.gz
[2025-11-24 16:35:36] -rwx------. 1 boinc boinc     36292 Nov 24 04:51 runpilot2-wrapper.sh
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc      5112 Nov 24 04:51 queuedata.json
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc       100 Nov 24 16:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:35:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 16:27 run_atlas
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc       105 Nov 24 16:27 job.xml
[2025-11-24 16:35:36] -rw-r--r--. 2 boinc boinc 410440792 Nov 24 16:27 EVNT.47483658._001338.pool.root.1
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc      6594 Nov 24 16:27 init_data.xml
[2025-11-24 16:35:36] -rw-r--r--. 2 boinc boinc     15847 Nov 24 16:27 start_atlas.sh
[2025-11-24 16:35:36] drwxrwx--x. 2 boinc boinc      4096 Nov 24 16:27 shared
[2025-11-24 16:35:36] -rw-r--r--. 2 boinc boinc    590106 Nov 24 16:27 input.tar.gz
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc         0 Nov 24 16:27 boinc_lockfile
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc      2786 Nov 24 16:27 pandaJob.out
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc    991801 Nov 24 16:28 agis_schedconf.cvmfs.json
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc   1516227 Nov 24 16:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:35:36] drwx------. 5 boinc boinc      4096 Nov 24 16:28 pilot3
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc       524 Nov 24 16:31 boinc_task_state.xml
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc      1012 Nov 24 16:32 memory_monitor_summary.json
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc     50107 Nov 24 16:32 log.47556149._003248.job.log.tgz.1
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc     10343 Nov 24 16:34 heartbeat.json
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc        95 Nov 24 16:35 pilot_heartbeat.json
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc        23 Nov 24 16:35 wrapper_checkpoint.txt
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc      8192 Nov 24 16:35 boinc_mmap_file
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc      4823 Nov 24 16:35 pilotlog.txt
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc    110547 Nov 24 16:35 log.47556149._003248.job.log.1
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc       186 Nov 24 16:35 output.list
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc       620 Nov 24 16:35 runtime_log
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc    184320 Nov 24 16:35 result.tar.gz
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc      8636 Nov 24 16:35 runtime_log.err
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc       647 Nov 24 16:35 gnpKDm5Dlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSgLKDmifBSMm.diag
[2025-11-24 16:35:36] -rw-r--r--. 1 boinc boinc     19331 Nov 24 16:35 stderr.txt
[2025-11-24 16:35:36] No HITS result produced
[2025-11-24 16:35:36]  *** Contents of shared directory: ***
[2025-11-24 16:35:36] total 401604
[2025-11-24 16:35:36] -rw-r--r--. 2 boinc boinc 410440792 Nov 24 16:27 ATLAS.root_0
[2025-11-24 16:35:36] -rw-r--r--. 2 boinc boinc     15847 Nov 24 16:27 start_atlas.sh
[2025-11-24 16:35:36] -rw-r--r--. 2 boinc boinc    590106 Nov 24 16:27 input.tar.gz
[2025-11-24 16:35:36] -rw-------. 1 boinc boinc    184320 Nov 24 16:35 result.tar.gz
16:35:38 (2835582): run_atlas exited; CPU time 49.380014
16:35:38 (2835582): called boinc_finish(0)

</stderr_txt>
]]>

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