Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:06 (15848): wrapper (7.7.26015): starting
04:33:06 (15848): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 04:33:06] Arguments: --nthreads 8
[2025-11-27 04:33:06] Threads: 8
[2025-11-27 04:33:06] Checking for CVMFS
[2025-11-27 04:33:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:33:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:33:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:33:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:33:09] 2.11.2.0 13466 286255 139596 153345 2 85 16197763 25165825 1288 130560 11 139963544 99.866 87539887 3432 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 04:33:09] CVMFS is ok
[2025-11-27 04:33:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:33:09] Checking for apptainer binary...
[2025-11-27 04:33:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:33:09] Running /usr/bin/apptainer --version
[2025-11-27 04:33:09] apptainer version 1.3.2-1.el7
[2025-11-27 04:33:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:33:40] cg-vwn493.simple-grid.lan
[2025-11-27 04:33:40] apptainer works
[2025-11-27 04:33:40] Set ATHENA_PROC_NUMBER=8
[2025-11-27 04:33:40] Set ATHENA_CORE_NUMBER=8
[2025-11-27 04:33:40] Starting ATLAS job with PandaID=6895378996
[2025-11-27 04:33:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:55:47]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:55:47] 2025-11-28 00:54:28,755 | INFO     | monitor loop #5197: job 0:6895378996 is in state 'finished'
[2025-11-28 01:55:47] 2025-11-28 00:54:28,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:55:47] 2025-11-28 00:54:28,803 | INFO     | time since job start (76625s) is within the limit (172800.0s)
[2025-11-28 01:55:47] 2025-11-28 00:54:29,949 | INFO     | PID=19645 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 01:55:47] 2025-11-28 00:54:29,949 | INFO     | .. there are 9 such processes running
[2025-11-28 01:55:47] 2025-11-28 00:54:30,950 | INFO     | time since job start (76627s) is within the limit (172800.0s)
[2025-11-28 01:55:47] 2025-11-28 00:54:31,260 | INFO     | monitor loop #5198: job 0:6895378996 is in state 'finished'
[2025-11-28 01:55:47] 2025-11-28 00:54:31,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:55:47] 2025-11-28 00:54:32,957 | INFO     | time since job start (76629s) is within the limit (172800.0s)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,254 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 01:55:47] 2025-11-28 00:54:33,255 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-28 01:55:47] 2025-11-28 00:54:33,263 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6895378996/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,263 | INFO     | extracted standard info from prmon json
[2025-11-28 01:55:47] 2025-11-28 00:54:33,263 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:55:47] 2025-11-28 00:54:33,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:55:47] 2025-11-28 00:54:33,284 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:55:47] 2025-11-28 00:54:33,286 | INFO     | sum of square deviations: 599836430605.8014
[2025-11-28 01:55:47] 2025-11-28 00:54:33,335 | INFO     | sum of deviations: 3266172690838.443
[2025-11-28 01:55:47] 2025-11-28 00:54:33,336 | INFO     | mean x: 1764253151.5369182
[2025-11-28 01:55:47] 2025-11-28 00:54:33,336 | INFO     | mean y: 2838742.5120385233
[2025-11-28 01:55:47] 2025-11-28 00:54:33,336 | INFO     | intersect: -9603705924.099627
[2025-11-28 01:55:47] 2025-11-28 00:54:33,337 | INFO     | chi2: 19.583504047317373
[2025-11-28 01:55:47] 2025-11-28 00:54:33,339 | INFO     | sum of square deviations: 592644624692.9034
[2025-11-28 01:55:47] 2025-11-28 00:54:33,384 | INFO     | sum of deviations: 3696478346650.7046
[2025-11-28 01:55:47] 2025-11-28 00:54:33,384 | INFO     | mean x: 1764252999.041096
[2025-11-28 01:55:47] 2025-11-28 00:54:33,385 | INFO     | mean y: 2847866.9274778403
[2025-11-28 01:55:47] 2025-11-28 00:54:33,385 | INFO     | intersect: -11001256004.508629
[2025-11-28 01:55:47] 2025-11-28 00:54:33,386 | INFO     | chi2: 16.20260915062544
[2025-11-28 01:55:47] 2025-11-28 00:54:33,386 | INFO     | current chi2=16.20260915062544 (change=17.263993657738997 %)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,386 | INFO     | right removable region: 1240
[2025-11-28 01:55:47] 2025-11-28 00:54:33,388 | INFO     | sum of square deviations: 592643836572.9032
[2025-11-28 01:55:47] 2025-11-28 00:54:33,428 | INFO     | sum of deviations: 2734645907702.513
[2025-11-28 01:55:47] 2025-11-28 00:54:33,428 | INFO     | mean x: 1764253304.041096
[2025-11-28 01:55:47] 2025-11-28 00:54:33,428 | INFO     | mean y: 2850012.0684931506
[2025-11-28 01:55:47] 2025-11-28 00:54:33,428 | INFO     | intersect: -8137972148.414955
[2025-11-28 01:55:47] 2025-11-28 00:54:33,430 | INFO     | chi2: 14.602427652721916
[2025-11-28 01:55:47] 2025-11-28 00:54:33,430 | INFO     | current chi2=14.602427652721916 (change=25.435061991767427 %)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,432 | INFO     | sum of square deviations: 585508964552.4626
[2025-11-28 01:55:47] 2025-11-28 00:54:33,478 | INFO     | sum of deviations: 2293402729338.037
[2025-11-28 01:55:47] 2025-11-28 00:54:33,478 | INFO     | mean x: 1764253456.5453074
[2025-11-28 01:55:47] 2025-11-28 00:54:33,478 | INFO     | mean y: 2859441.7046925565
[2025-11-28 01:55:47] 2025-11-28 00:54:33,478 | INFO     | intersect: -6907613219.593958
[2025-11-28 01:55:47] 2025-11-28 00:54:33,480 | INFO     | chi2: 11.297447160946579
[2025-11-28 01:55:47] 2025-11-28 00:54:33,480 | INFO     | current chi2=11.297447160946579 (change=22.633089307991085 %)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,480 | INFO     | left removable region: 20
[2025-11-28 01:55:47] 2025-11-28 00:54:33,481 | INFO     | sum of square deviations: 563063876007.3208
[2025-11-28 01:55:47] 2025-11-28 00:54:33,523 | INFO     | sum of deviations: 2259734952051.713
[2025-11-28 01:55:47] 2025-11-28 00:54:33,523 | INFO     | mean x: 1764253578.554918
[2025-11-28 01:55:47] 2025-11-28 00:54:33,523 | INFO     | mean y: 2882830.7729508197
[2025-11-28 01:55:47] 2025-11-28 00:54:33,524 | INFO     | intersect: -7077566911.470904
[2025-11-28 01:55:47] 2025-11-28 00:54:33,525 | INFO     | chi2: 3.6732159381175107
[2025-11-28 01:55:47] 2025-11-28 00:54:33,525 | INFO     | current memory leak: 4.01 B/s (using 1220 data points, chi2=3.67)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,526 | INFO     | could have reported an average CPU frequency of 2249 MHz (43 samples)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,526 | INFO     | ..............................
[2025-11-28 01:55:47] 2025-11-28 00:54:33,526 | INFO     | . Timing measurements:
[2025-11-28 01:55:47] 2025-11-28 00:54:33,526 | INFO     | . get job = 0 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,526 | INFO     | . initial setup = 5 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,526 | INFO     | . payload setup = 167 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,527 | INFO     | . stage-in = 0 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,527 | INFO     | . payload execution = 76155 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,527 | INFO     | . stage-out = 4 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,527 | INFO     | . log creation = 1 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,527 | INFO     | ..............................
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | 
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | job summary report
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | --------------------------------------------------
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | PanDA job id: 6895378996
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | task id: 47556137
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | errors: (none)
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:55:47] 2025-11-28 00:54:33,628 | INFO     | pilot state: finished 
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | transexitcode: 0
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | exeerrorcode: 0
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | exeerrordiag: 
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | exitcode: 0
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | exitmsg: OK
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | cpuconsumptiontime: 286773 s
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | nevents: 1000
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | neventsw: 0
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | pid: 26241
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | pgrp: 26241
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | corecount: 8
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | event service: False
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | sizes: {0: 2284087, 1: 2284342, 12: 2284342, 23: 2284370, 34: 2284398, 44: 2284426, 55: 2284582, 66: 2284610, 76: 2284638, 87: 2284694, 98: 2284722, 99: 2285292, 1
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | --------------------------------------------------
[2025-11-28 01:55:47] 2025-11-28 00:54:33,629 | INFO     | 
[2025-11-28 01:55:47] 2025-11-28 00:54:33,630 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-28 01:55:47] 2025-11-28 00:54:34,342 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,342 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,343 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | job 6895378996 has completed (purged errors)
[2025-11-28 01:55:47] 2025-11-28 00:54:34,344 | INFO     | overall cleanup function is called
[2025-11-28 01:55:47] 2025-11-28 00:54:35,364 | INFO     | --- collectZombieJob: --- 10, [26241]
[2025-11-28 01:55:47] 2025-11-28 00:54:35,364 | INFO     | zombie collector waiting for pid 26241
[2025-11-28 01:55:47] 2025-11-28 00:54:35,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:55:47] 2025-11-28 00:54:35,364 | INFO     | collected zombie processes
[2025-11-28 01:55:47] 2025-11-28 00:54:35,364 | INFO     | will attempt to kill all subprocesses of pid=26241
[2025-11-28 01:55:47] 2025-11-28 00:54:35,504 | INFO     | process IDs to be killed: [26241] (in reverse order)
[2025-11-28 01:55:47] 2025-11-28 00:54:36,364 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:55:47] 2025-11-28 00:54:36,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:55:47] 2025-11-28 00:54:36,367 | INFO     | did not find any defunct processes belonging to 26241
[2025-11-28 01:55:47] 2025-11-28 00:54:36,369 | INFO     | did not find any defunct processes belonging to 26241
[2025-11-28 01:55:47] 2025-11-28 00:54:36,434 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:55:47] 2025-11-28 00:54:36,434 | INFO     | ready for new job
[2025-11-28 01:55:47] 2025-11-28 00:54:36,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:55:47] 2025-11-28 00:54:36,439 | INFO     | ***************************************
[2025-11-28 01:55:47] 2025-11-28 00:54:36,439 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:55:47] 2025-11-28 00:54:36,439 | INFO     | ***************************************
[2025-11-28 01:55:47] 2025-11-28 00:54:36,439 | INFO     | 
[2025-11-28 01:55:47] 2025-11-28 00:54:36,440 | INFO     | pilot is running in a VM
[2025-11-28 01:55:47] 2025-11-28 00:54:36,440 | INFO     | architecture information:
[2025-11-28 01:55:47] 2025-11-28 00:54:36,445 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:55:47] 2025-11-28 00:54:36,682 | INFO     | cat /etc/os-release:
[2025-11-28 01:55:47] NAME="CentOS Linux"
[2025-11-28 01:55:47] VERSION="7 (Core)"
[2025-11-28 01:55:47] ID="centos"
[2025-11-28 01:55:47] ID_LIKE="rhel fedora"
[2025-11-28 01:55:47] VERSION_ID="7"
[2025-11-28 01:55:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:55:47] ANSI_COLOR="0;31"
[2025-11-28 01:55:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:55:47] HOME_URL="https://www.centos.org/"
[2025-11-28 01:55:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:55:47] 
[2025-11-28 01:55:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:55:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:55:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:55:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:55:47] 
[2025-11-28 01:55:47] 2025-11-28 00:54:36,682 | INFO     | ***************************************
[2025-11-28 01:55:47] 2025-11-28 00:54:37,186 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-28 01:55:47] 2025-11-28 00:54:37,456 | INFO     | sufficient remaining disk space (496138977280 B)
[2025-11-28 01:55:47] 2025-11-28 00:54:37,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:55:47] 2025-11-28 00:54:37,457 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:55:47] 2025-11-28 00:54:37,457 | INFO     | update_server=False
[2025-11-28 01:55:47] 2025-11-28 00:54:37,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:55:47] 2025-11-28 00:54:37,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:55:47] 2025-11-28 00:54:37,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:55:47] 2025-11-28 00:54:37,460 | INFO     | aborting loop
[2025-11-28 01:55:47] 2025-11-28 00:54:37,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:55:47] 2025-11-28 00:54:37,557 | INFO     | all payload control threads have been joined
[2025-11-28 01:55:47] 2025-11-28 00:54:38,258 | INFO     | all job control threads have been joined
[2025-11-28 01:55:47] 2025-11-28 00:54:38,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:38,462 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:38,466 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:38,504 | INFO     | all data control threads have been joined
[2025-11-28 01:55:47] 2025-11-28 00:54:38,563 | INFO     | [payload] control thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:38,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:55:47] 2025-11-28 00:54:38,731 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:38,795 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:38,893 | INFO     | [job] validate thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,028 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,264 | INFO     | [job] control thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,374 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,465 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,510 | INFO     | [data] control thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,558 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,651 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:39,772 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:54:41,475 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:55:47] 2025-11-28 00:55:06,120 | INFO     | PID=19645 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 01:55:47] 2025-11-28 00:55:06,120 | INFO     | .. there are 9 such processes running
[2025-11-28 01:55:47] 2025-11-28 00:55:06,121 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:55:47] 2025-11-28 00:55:06,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:55:47] 2025-11-28 00:55:06,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:55:47] 2025-11-28 00:55:36,174 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:55:47] 2025-11-28 00:55:36,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968918939456)>', '<ExcThread(monitor, started 139968311699200)>']
[2025-11-28 01:55:47] 2025-11-28 00:55:37,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:55:47] 2025-11-28 00:55:37,307 | INFO     | [monitor] control thread has ended
[2025-11-28 01:55:47] 2025-11-28 00:55:41,952 | INFO     | all workflow threads have been joined
[2025-11-28 01:55:47] 2025-11-28 00:55:41,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:55:47] 2025-11-28 00:55:41,952 | INFO     | traces error code: 0
[2025-11-28 01:55:47] 2025-11-28 00:55:41,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:55:47] 2025-11-28 00:55:42,360 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:55:47] 2025-11-28 00:55:42,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:55:47] 2025-11-28 00:55:42,575 [wrapper] pilotpid: 19645
[2025-11-28 01:55:47] 2025-11-28 00:55:42,676 [wrapper] Pilot exit status: 0
[2025-11-28 01:55:47] 2025-11-28 00:55:43,180 [wrapper] pandaids: 6895378996
[2025-11-28 01:55:47] 2025-11-28 00:55:44,190 [wrapper] cleanup supervisor_pilot 21976 19646
[2025-11-28 01:55:47] 2025-11-28 00:55:44,290 [wrapper] Test setup, not cleaning
[2025-11-28 01:55:47] 2025-11-28 00:55:44,403 [wrapper] apfmon messages muted
[2025-11-28 01:55:47] 2025-11-28 00:55:44,547 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:55:47] 2025-11-28 00:55:44,666 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:55:47]  *** Error codes and diagnostics ***
[2025-11-28 01:55:47]     "exeErrorCode": 0,
[2025-11-28 01:55:47]     "exeErrorDiag": "",
[2025-11-28 01:55:47]     "pilotErrorCode": 0,
[2025-11-28 01:55:47]     "pilotErrorDiag": "",
[2025-11-28 01:55:47]  *** Listing of results directory ***
[2025-11-28 01:55:47] total 1324032
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc    576529 Nov 24 02:13 pilot3.tar.gz
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc      5112 Nov 24 02:59 queuedata.json
[2025-11-28 01:55:47] -rwx------. 1 boinc boinc     36292 Nov 24 03:01 runpilot2-wrapper.sh
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc       100 Nov 27 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:55:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 04:33 run_atlas
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc       105 Nov 27 04:33 job.xml
[2025-11-28 01:55:47] -rw-r--r--. 2 boinc boinc 410194389 Nov 27 04:33 EVNT.47483658._000973.pool.root.1
[2025-11-28 01:55:47] -rw-r--r--. 2 boinc boinc     15847 Nov 27 04:33 start_atlas.sh
[2025-11-28 01:55:47] drwxrwx--x. 2 boinc boinc        68 Nov 27 04:33 shared
[2025-11-28 01:55:47] -rw-r--r--. 2 boinc boinc    590104 Nov 27 04:33 input.tar.gz
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc      6391 Nov 27 04:33 init_data.xml
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc         0 Nov 27 04:33 boinc_lockfile
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc      2785 Nov 27 04:33 pandaJob.out
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc    991546 Nov 27 04:37 agis_schedconf.cvmfs.json
[2025-11-28 01:55:47] drwx------. 5 boinc boinc      4096 Nov 27 04:37 pilot3
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc       533 Nov 28 01:37 boinc_task_state.xml
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc 916511363 Nov 28 01:51 HITS.47556137._009598.pool.root.1
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc      1026 Nov 28 01:52 memory_monitor_summary.json
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc   1516240 Nov 28 01:52 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc   2363214 Nov 28 01:52 log.47556137._009598.job.log.tgz.1
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc      8640 Nov 28 01:54 heartbeat.json
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc        95 Nov 28 01:55 pilot_heartbeat.json
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc      8192 Nov 28 01:55 boinc_mmap_file
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc        29 Nov 28 01:55 wrapper_checkpoint.txt
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc      4884 Nov 28 01:55 pilotlog.txt
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc  10237540 Nov 28 01:55 log.47556137._009598.job.log.1
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc       353 Nov 28 01:55 output.list
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc       620 Nov 28 01:55 runtime_log
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc  12615680 Nov 28 01:55 result.tar.gz
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc      8817 Nov 28 01:55 runtime_log.err
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc       662 Nov 28 01:55 6vFLDmO4ah8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiKLKDm61e9An.diag
[2025-11-28 01:55:47] -rw-r--r--. 1 boinc boinc     21290 Nov 28 01:55 stderr.txt
[2025-11-28 01:55:47] HITS file was successfully produced:
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc 916511363 Nov 28 01:51 shared/HITS.pool.root.1
[2025-11-28 01:55:47]  *** Contents of shared directory: ***
[2025-11-28 01:55:47] total 1308532
[2025-11-28 01:55:47] -rw-r--r--. 2 boinc boinc 410194389 Nov 27 04:33 ATLAS.root_0
[2025-11-28 01:55:47] -rw-r--r--. 2 boinc boinc     15847 Nov 27 04:33 start_atlas.sh
[2025-11-28 01:55:47] -rw-r--r--. 2 boinc boinc    590104 Nov 27 04:33 input.tar.gz
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc 916511363 Nov 28 01:51 HITS.pool.root.1
[2025-11-28 01:55:47] -rw-------. 1 boinc boinc  12615680 Nov 28 01:55 result.tar.gz
01:55:49 (15848): run_atlas exited; CPU time 287229.316327
01:55:49 (15848): called boinc_finish(0)

</stderr_txt>
]]>

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