Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:11:03 (19228): wrapper (7.7.26015): starting
02:11:03 (19228): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 02:11:03] Arguments: --nthreads 8
[2025-11-27 02:11:03] Threads: 8
[2025-11-27 02:11:03] Checking for CVMFS
[2025-11-27 02:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:11:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:11:05] 2.11.2.0 20015 285980 138288 153341 0 85 23996855 25165824 1288 130560 11 139216319 99.875 81987669 2632 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 02:11:05] CVMFS is ok
[2025-11-27 02:11:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:11:05] Checking for apptainer binary...
[2025-11-27 02:11:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:11:05] Running /usr/bin/apptainer --version
[2025-11-27 02:11:05] apptainer version 1.3.2-1.el7
[2025-11-27 02:11:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:11:29] cg-vwn356.simple-grid.lan
[2025-11-27 02:11:29] apptainer works
[2025-11-27 02:11:29] Set ATHENA_PROC_NUMBER=8
[2025-11-27 02:11:29] Set ATHENA_CORE_NUMBER=8
[2025-11-27 02:11:29] Starting ATLAS job with PandaID=6895354850
[2025-11-27 02:11:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:19:01]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:19:01] 2025-11-28 00:18:02,089 | INFO     | monitor loop #5587: job 0:6895354850 is in state 'finished'
[2025-11-28 01:19:01] 2025-11-28 00:18:02,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:19:01] 2025-11-28 00:18:03,376 | INFO     | time since job start (82957s) is within the limit (172800.0s)
[2025-11-28 01:19:01] 2025-11-28 00:18:04,596 | INFO     | monitor loop #5588: job 0:6895354850 is in state 'finished'
[2025-11-28 01:19:01] 2025-11-28 00:18:04,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:19:01] 2025-11-28 00:18:05,382 | INFO     | time since job start (82959s) is within the limit (172800.0s)
[2025-11-28 01:19:01] 2025-11-28 00:18:07,102 | INFO     | monitor loop #5589: job 0:6895354850 is in state 'finished'
[2025-11-28 01:19:01] 2025-11-28 00:18:07,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:19:01] 2025-11-28 00:18:07,392 | INFO     | time since job start (82961s) is within the limit (172800.0s)
[2025-11-28 01:19:01] 2025-11-28 00:18:09,401 | INFO     | time since job start (82963s) is within the limit (172800.0s)
[2025-11-28 01:19:01] 2025-11-28 00:18:09,615 | INFO     | monitor loop #5590: job 0:6895354850 is in state 'finished'
[2025-11-28 01:19:01] 2025-11-28 00:18:09,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:19:01] 2025-11-28 00:18:11,408 | INFO     | time since job start (82965s) is within the limit (172800.0s)
[2025-11-28 01:19:01] 2025-11-28 00:18:12,124 | INFO     | monitor loop #5591: job 0:6895354850 is in state 'finished'
[2025-11-28 01:19:01] 2025-11-28 00:18:12,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,059 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 01:19:01] 2025-11-28 00:18:13,062 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 01:19:01] 2025-11-28 00:18:13,064 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895354850/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,065 | INFO     | extracted standard info from prmon json
[2025-11-28 01:19:01] 2025-11-28 00:18:13,065 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:19:01] 2025-11-28 00:18:13,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:19:01] 2025-11-28 00:18:13,089 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:19:01] 2025-11-28 00:18:13,091 | INFO     | sum of square deviations: 762921088200.9503
[2025-11-28 01:19:01] 2025-11-28 00:18:13,158 | INFO     | sum of deviations: 3133125865204.1016
[2025-11-28 01:19:01] 2025-11-28 00:18:13,158 | INFO     | mean x: 1764247792.5696297
[2025-11-28 01:19:01] 2025-11-28 00:18:13,158 | INFO     | mean y: 2840815.982962963
[2025-11-28 01:19:01] 2025-11-28 00:18:13,158 | INFO     | intersect: -7242483080.573423
[2025-11-28 01:19:01] 2025-11-28 00:18:13,160 | INFO     | chi2: 20.472707541796737
[2025-11-28 01:19:01] 2025-11-28 00:18:13,162 | INFO     | sum of square deviations: 754475984217.7134
[2025-11-28 01:19:01] 2025-11-28 00:18:13,222 | INFO     | sum of deviations: 3583099017152.736
[2025-11-28 01:19:01] 2025-11-28 00:18:13,222 | INFO     | mean x: 1764247640.073606
[2025-11-28 01:19:01] 2025-11-28 00:18:13,223 | INFO     | mean y: 2848940.649070632
[2025-11-28 01:19:01] 2025-11-28 00:18:13,223 | INFO     | intersect: -8375779560.980786
[2025-11-28 01:19:01] 2025-11-28 00:18:13,224 | INFO     | chi2: 17.26477691872599
[2025-11-28 01:19:01] 2025-11-28 00:18:13,224 | INFO     | current chi2=17.26477691872599 (change=15.669303224898274 %)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,224 | INFO     | right removable region: 1344
[2025-11-28 01:19:01] 2025-11-28 00:18:13,226 | INFO     | sum of square deviations: 754475103377.7129
[2025-11-28 01:19:01] 2025-11-28 00:18:13,280 | INFO     | sum of deviations: 2564511283852.3394
[2025-11-28 01:19:01] 2025-11-28 00:18:13,280 | INFO     | mean x: 1764247945.073606
[2025-11-28 01:19:01] 2025-11-28 00:18:13,280 | INFO     | mean y: 2851082.4208178436
[2025-11-28 01:19:01] 2025-11-28 00:18:13,280 | INFO     | intersect: -5993945554.604192
[2025-11-28 01:19:01] 2025-11-28 00:18:13,282 | INFO     | chi2: 15.686180855841434
[2025-11-28 01:19:01] 2025-11-28 00:18:13,282 | INFO     | current chi2=15.686180855841434 (change=23.38003742877297 %)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,282 | INFO     | left removable region: 10
[2025-11-28 01:19:01] 2025-11-28 00:18:13,284 | INFO     | sum of square deviations: 736114875106.4294
[2025-11-28 01:19:01] 2025-11-28 00:18:13,335 | INFO     | sum of deviations: 2612467723515.773
[2025-11-28 01:19:01] 2025-11-28 00:18:13,336 | INFO     | mean x: 1764247914.5824587
[2025-11-28 01:19:01] 2025-11-28 00:18:13,336 | INFO     | mean y: 2870288.8020989504
[2025-11-28 01:19:01] 2025-11-28 00:18:13,336 | INFO     | intersect: -6258436049.3700485
[2025-11-28 01:19:01] 2025-11-28 00:18:13,338 | INFO     | chi2: 8.060343617848197
[2025-11-28 01:19:01] 2025-11-28 00:18:13,338 | INFO     | current memory leak: 3.55 B/s (using 1334 data points, chi2=8.06)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,339 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,339 | INFO     | ..............................
[2025-11-28 01:19:01] 2025-11-28 00:18:13,339 | INFO     | . Timing measurements:
[2025-11-28 01:19:01] 2025-11-28 00:18:13,339 | INFO     | . get job = 0 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,339 | INFO     | . initial setup = 10 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,340 | INFO     | . payload setup = 146 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,340 | INFO     | . stage-in = 0 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,340 | INFO     | . payload execution = 82510 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,340 | INFO     | . stage-out = 5 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,340 | INFO     | . log creation = 2 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,340 | INFO     | ..............................
[2025-11-28 01:19:01] 2025-11-28 00:18:13,420 | INFO     | time since job start (82967s) is within the limit (172800.0s)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,534 | INFO     | 
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | job summary report
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | --------------------------------------------------
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | PanDA job id: 6895354850
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | task id: 47556149
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | errors: (none)
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | pilot state: finished 
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | transexitcode: 0
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | exeerrorcode: 0
[2025-11-28 01:19:01] 2025-11-28 00:18:13,535 | INFO     | exeerrordiag: 
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | exitcode: 0
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | exitmsg: OK
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | cpuconsumptiontime: 311948 s
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | nevents: 1000
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | neventsw: 0
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | pid: 29629
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | pgrp: 29629
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | corecount: 8
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | event service: False
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | sizes: {0: 2284030, 1: 2284285, 12: 2284285, 23: 2284313, 33: 2284341, 44: 2284397, 55: 2284553, 65: 2284581, 76: 2284609, 87: 2284665, 98: 2284693, 101: 2285263, 
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | --------------------------------------------------
[2025-11-28 01:19:01] 2025-11-28 00:18:13,536 | INFO     | 
[2025-11-28 01:19:01] 2025-11-28 00:18:13,537 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-28 01:19:01] 2025-11-28 00:18:14,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | job 6895354850 has completed (purged errors)
[2025-11-28 01:19:01] 2025-11-28 00:18:14,184 | INFO     | overall cleanup function is called
[2025-11-28 01:19:01] 2025-11-28 00:18:15,200 | INFO     | --- collectZombieJob: --- 10, [29629]
[2025-11-28 01:19:01] 2025-11-28 00:18:15,201 | INFO     | zombie collector waiting for pid 29629
[2025-11-28 01:19:01] 2025-11-28 00:18:15,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:19:01] 2025-11-28 00:18:15,201 | INFO     | collected zombie processes
[2025-11-28 01:19:01] 2025-11-28 00:18:15,201 | INFO     | will attempt to kill all subprocesses of pid=29629
[2025-11-28 01:19:01] 2025-11-28 00:18:15,286 | INFO     | process IDs to be killed: [29629] (in reverse order)
[2025-11-28 01:19:01] 2025-11-28 00:18:16,072 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:19:01] 2025-11-28 00:18:16,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:19:01] 2025-11-28 00:18:16,075 | INFO     | did not find any defunct processes belonging to 29629
[2025-11-28 01:19:01] 2025-11-28 00:18:16,078 | INFO     | did not find any defunct processes belonging to 29629
[2025-11-28 01:19:01] 2025-11-28 00:18:16,125 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:19:01] 2025-11-28 00:18:16,125 | INFO     | ready for new job
[2025-11-28 01:19:01] 2025-11-28 00:18:16,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:19:01] 2025-11-28 00:18:16,130 | INFO     | ***************************************
[2025-11-28 01:19:01] 2025-11-28 00:18:16,130 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:19:01] 2025-11-28 00:18:16,130 | INFO     | ***************************************
[2025-11-28 01:19:01] 2025-11-28 00:18:16,130 | INFO     | 
[2025-11-28 01:19:01] 2025-11-28 00:18:16,131 | INFO     | pilot is running in a VM
[2025-11-28 01:19:01] 2025-11-28 00:18:16,131 | INFO     | architecture information:
[2025-11-28 01:19:01] 2025-11-28 00:18:16,142 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:19:01] 2025-11-28 00:18:16,443 | INFO     | cat /etc/os-release:
[2025-11-28 01:19:01] NAME="CentOS Linux"
[2025-11-28 01:19:01] VERSION="7 (Core)"
[2025-11-28 01:19:01] ID="centos"
[2025-11-28 01:19:01] ID_LIKE="rhel fedora"
[2025-11-28 01:19:01] VERSION_ID="7"
[2025-11-28 01:19:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:19:01] ANSI_COLOR="0;31"
[2025-11-28 01:19:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:19:01] HOME_URL="https://www.centos.org/"
[2025-11-28 01:19:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:19:01] 
[2025-11-28 01:19:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:19:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:19:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:19:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:19:01] 
[2025-11-28 01:19:01] 2025-11-28 00:18:16,443 | INFO     | ***************************************
[2025-11-28 01:19:01] 2025-11-28 00:18:16,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-28 01:19:01] 2025-11-28 00:18:17,199 | INFO     | sufficient remaining disk space (495407071232 B)
[2025-11-28 01:19:01] 2025-11-28 00:18:17,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:19:01] 2025-11-28 00:18:17,200 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:19:01] 2025-11-28 00:18:17,200 | INFO     | update_server=False
[2025-11-28 01:19:01] 2025-11-28 00:18:17,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:19:01] 2025-11-28 00:18:17,282 | INFO     | all job control threads have been joined
[2025-11-28 01:19:01] 2025-11-28 00:18:17,850 | INFO     | all data control threads have been joined
[2025-11-28 01:19:01] 2025-11-28 00:18:18,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:19:01] 2025-11-28 00:18:18,156 | INFO     | aborting loop
[2025-11-28 01:19:01] 2025-11-28 00:18:18,206 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:18,288 | INFO     | [job] control thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:18,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:18,397 | INFO     | [job] validate thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:18,451 | INFO     | all payload control threads have been joined
[2025-11-28 01:19:01] 2025-11-28 00:18:18,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:19:01] 2025-11-28 00:18:18,562 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:18,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:19:01] 2025-11-28 00:18:18,856 | INFO     | [data] control thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:18,928 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,161 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,186 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:19:01] 2025-11-28 00:18:19,356 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,457 | INFO     | [payload] control thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,477 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,488 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:19,775 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:20,702 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:23,279 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:19:01] 2025-11-28 00:18:46,624 | INFO     | PID=23058 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 01:19:01] 2025-11-28 00:18:46,624 | INFO     | .. there are 9 such processes running
[2025-11-28 01:19:01] 2025-11-28 00:18:46,625 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:19:01] 2025-11-28 00:18:46,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:19:01] 2025-11-28 00:18:46,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:19:01] 2025-11-28 00:18:50,801 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:19:01] 2025-11-28 00:18:51,744 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253296629568)>', '<ExcThread(monitor, started 140252995892992)>']
[2025-11-28 01:19:01] 2025-11-28 00:18:52,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:19:01] 2025-11-28 00:18:52,662 | INFO     | [monitor] control thread has ended
[2025-11-28 01:19:01] 2025-11-28 00:18:56,770 | INFO     | all workflow threads have been joined
[2025-11-28 01:19:01] 2025-11-28 00:18:56,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:19:01] 2025-11-28 00:18:56,771 | INFO     | traces error code: 0
[2025-11-28 01:19:01] 2025-11-28 00:18:56,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:19:01] 2025-11-28 00:18:57,096 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:19:01] 2025-11-28 00:18:57,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:19:01] 2025-11-28 00:18:57,259 [wrapper] pilotpid: 23058
[2025-11-28 01:19:01] 2025-11-28 00:18:57,340 [wrapper] Pilot exit status: 0
[2025-11-28 01:19:01] 2025-11-28 00:18:57,747 [wrapper] pandaids: 6895354850
[2025-11-28 01:19:01] 2025-11-28 00:18:58,437 [wrapper] cleanup supervisor_pilot 32455 23059
[2025-11-28 01:19:01] 2025-11-28 00:18:58,501 [wrapper] Test setup, not cleaning
[2025-11-28 01:19:01] 2025-11-28 00:18:58,607 [wrapper] apfmon messages muted
[2025-11-28 01:19:01] 2025-11-28 00:18:58,728 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:19:01] 2025-11-28 00:18:58,814 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:19:01]  *** Error codes and diagnostics ***
[2025-11-28 01:19:01]     "exeErrorCode": 0,
[2025-11-28 01:19:01]     "exeErrorDiag": "",
[2025-11-28 01:19:01]     "pilotErrorCode": 0,
[2025-11-28 01:19:01]     "pilotErrorDiag": "",
[2025-11-28 01:19:01]  *** Listing of results directory ***
[2025-11-28 01:19:01] total 1324132
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc    576529 Nov 23 06:21 pilot3.tar.gz
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc      5112 Nov 23 06:42 queuedata.json
[2025-11-28 01:19:01] -rwx------. 1 boinc boinc     36292 Nov 23 06:43 runpilot2-wrapper.sh
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc       100 Nov 27 02:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:19:01] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 02:11 run_atlas
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc       105 Nov 27 02:11 job.xml
[2025-11-28 01:19:01] -rw-r--r--. 2 boinc boinc 410036763 Nov 27 02:11 EVNT.47483658._001142.pool.root.1
[2025-11-28 01:19:01] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:11 start_atlas.sh
[2025-11-28 01:19:01] drwxrwx--x. 2 boinc boinc        68 Nov 27 02:11 shared
[2025-11-28 01:19:01] -rw-r--r--. 2 boinc boinc    590101 Nov 27 02:11 input.tar.gz
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc      6392 Nov 27 02:11 init_data.xml
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc         0 Nov 27 02:11 boinc_lockfile
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc      2781 Nov 27 02:11 pandaJob.out
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc    991530 Nov 27 02:15 agis_schedconf.cvmfs.json
[2025-11-28 01:19:01] drwx------. 5 boinc boinc      4096 Nov 27 02:15 pilot3
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:57 boinc_task_state.xml
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc 914956814 Nov 28 01:15 HITS.47556149._001281.pool.root.1
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc      1027 Nov 28 01:16 memory_monitor_summary.json
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc   1516240 Nov 28 01:16 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc   2450297 Nov 28 01:16 log.47556149._001281.job.log.tgz.1
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc        95 Nov 28 01:17 pilot_heartbeat.json
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc      7955 Nov 28 01:18 heartbeat.json
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc      8192 Nov 28 01:18 boinc_mmap_file
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc        29 Nov 28 01:18 wrapper_checkpoint.txt
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc      4884 Nov 28 01:18 pilotlog.txt
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc  11052879 Nov 28 01:18 log.47556149._001281.job.log.1
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc       353 Nov 28 01:19 output.list
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc       620 Nov 28 01:19 runtime_log
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc  13527040 Nov 28 01:19 result.tar.gz
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc      8817 Nov 28 01:19 runtime_log.err
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc       662 Nov 28 01:19 NldKDmZ3Hh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSgKKDmGPrYTm.diag
[2025-11-28 01:19:01] -rw-r--r--. 1 boinc boinc     21441 Nov 28 01:19 stderr.txt
[2025-11-28 01:19:01] HITS file was successfully produced:
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc 914956814 Nov 28 01:15 shared/HITS.pool.root.1
[2025-11-28 01:19:01]  *** Contents of shared directory: ***
[2025-11-28 01:19:01] total 1307752
[2025-11-28 01:19:01] -rw-r--r--. 2 boinc boinc 410036763 Nov 27 02:11 ATLAS.root_0
[2025-11-28 01:19:01] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:11 start_atlas.sh
[2025-11-28 01:19:01] -rw-r--r--. 2 boinc boinc    590101 Nov 27 02:11 input.tar.gz
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc 914956814 Nov 28 01:15 HITS.pool.root.1
[2025-11-28 01:19:01] -rw-------. 1 boinc boinc  13527040 Nov 28 01:19 result.tar.gz
01:19:03 (19228): run_atlas exited; CPU time 312492.112649
01:19:03 (19228): called boinc_finish(0)

</stderr_txt>
]]>

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