Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:23:48 (132836): wrapper (7.7.26015): starting
16:23:48 (132836): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 16:23:48] Arguments: --nthreads 12
[2025-11-24 16:23:48] Threads: 12
[2025-11-24 16:23:48] Checking for CVMFS
[2025-11-24 16:23:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:23:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:23:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:23:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:23:50] 2.11.5.0 2621781 25922 134548 153264 3 17 39592786 45568000 22860 130560 0 239245468 99.801 127490337 17695 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 16:23:50] CVMFS is ok
[2025-11-24 16:23:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:23:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:23:50] Further information can be found at the LHC@home message board.
[2025-11-24 16:23:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:23:50] Checking for apptainer binary...
[2025-11-24 16:23:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:23:50] Running /usr/bin/apptainer --version
[2025-11-24 16:23:50] apptainer version 1.4.1-1.el9
[2025-11-24 16:23:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:23:51] wns0058.triumf.lcg
[2025-11-24 16:23:51] apptainer works
[2025-11-24 16:23:51] Set ATHENA_PROC_NUMBER=12
[2025-11-24 16:23:51] Set ATHENA_CORE_NUMBER=12
[2025-11-24 16:23:51] Starting ATLAS job with PandaID=6895651689
[2025-11-24 16:23:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:32:29]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:32:29] 2025-11-25 00:31:28,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | WARNING  | wrong length of table data, x=[1764030340.0, 1764030401.0, 1764030462.0, 1764030523.0], y=[808.0, 322642.0, 886005.0, 523017.0] (must be same and length>=4)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | could have reported an average CPU frequency of 2646 MHz (4 samples)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | ..............................
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . Timing measurements:
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . get job = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . initial setup = 3 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . payload setup = 23 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . stage-in = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . payload execution = 242 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . stage-out = 1 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . log creation = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | ..............................
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895651689/pilotlog.txt
[2025-11-24 16:32:29] 2025-11-25 00:31:28,188 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 16:32:29] - Log from pilotlog.txt -
[2025-11-24 16:32:29] 2025-11-25 00:31:28,122 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895651689/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,123 | INFO     | extracted standard info from prmon json
[2025-11-24 16:32:29] 2025-11-25 00:31:28,123 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:32:29] 2025-11-25 00:31:28,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:32:29] 2025-11-25 00:31:28,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 16:32:29] 2025-11-25 00:31:28,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | WARNING  | wrong length of table data, x=[1764030340.0, 1764030401.0, 1764030462.0, 1764030523.0], y=[808.0, 322642.0, 886005.0, 523017.0] (must be same and length>=4)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | could have reported an average CPU frequency of 2646 MHz (4 samples)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | ..............................
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . Timing measurements:
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . get job = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . initial setup = 3 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . payload setup = 23 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . stage-in = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . payload execution = 242 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . stage-out = 1 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . log creation = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | ..............................
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895651689/pilotlog.txt
[2025-11-24 16:32:29] 2025-11-25 00:31:28,188 | WARNING  | 
[2025-11-24 16:32:29] [begin log extracts]
[2025-11-24 16:32:29] - Log from pilotlog.txt -
[2025-11-24 16:32:29] 2025-11-25 00:31:28,122 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895651689/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,123 | INFO     | extracted standard info from prmon json
[2025-11-24 16:32:29] 2025-11-25 00:31:28,123 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:32:29] 2025-11-25 00:31:28,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:32:29] 2025-11-25 00:31:28,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 16:32:29] 2025-11-25 00:31:28,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | WARNING  | wrong length of table data, x=[1764030340.0, 1764030401.0, 1764030462.0, 1764030523.0], y=[808.0, 322642.0, 886005.0, 523017.0] (must be same and length>=4)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | could have reported an average CPU frequency of 2646 MHz (4 samples)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | ..............................
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . Timing measurements:
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . get job = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,149 | INFO     | . initial setup = 3 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . payload setup = 23 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . stage-in = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . payload execution = 242 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . stage-out = 1 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | . log creation = 0 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | ..............................
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 16:32:29] 2025-11-25 00:31:28,150 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895651689/pilotlog.txt
[2025-11-24 16:32:29] [end log extracts]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,189 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,189 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | 
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | job summary report
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | --------------------------------------------------
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | PanDA job id: 6895651689
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | task id: 47556161
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 16:29:14,556 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | pilot state: failed 
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | transexitcode: 65
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | exeerrorcode: 65
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 16:32:29] 2025-11-25 00:31:28,453 | INFO     | exitcode: 65
[2025-11-24 16:32:29] 2025-11-25 00:31:28,454 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 16:32:29] 2025-11-25 00:31:28,454 | INFO     | cpuconsumptiontime: 50 s
[2025-11-24 16:32:29] 2025-11-25 00:31:28,454 | INFO     | nevents: 0
[2025-11-24 16:32:29] 2025-11-25 00:31:28,454 | INFO     | neventsw: 0
[2025-11-24 16:32:29] 2025-11-25 00:31:28,454 | INFO     | pid: 149335
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | pgrp: 149335
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | corecount: 12
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | event service: False
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | sizes: {0: 2284133, 1: 2284332, 11: 2284332, 12: 2284622, 22: 2284650, 269: 2310161, 270: 2310293, 272: 2314695, 395: 2314833}
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | --------------------------------------------------
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | 
[2025-11-24 16:32:29] 2025-11-25 00:31:28,455 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 16:32:29] 2025-11-25 00:31:28,524 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,526 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:32:29] 2025-11-25 00:31:28,526 | INFO     | job 6895651689 has completed (purged errors)
[2025-11-24 16:32:29] 2025-11-25 00:31:28,526 | INFO     | overall cleanup function is called
[2025-11-24 16:32:29] 2025-11-25 00:31:29,534 | INFO     | --- collectZombieJob: --- 10, [149335]
[2025-11-24 16:32:29] 2025-11-25 00:31:29,534 | INFO     | zombie collector waiting for pid 149335
[2025-11-24 16:32:29] 2025-11-25 00:31:29,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:32:29] 2025-11-25 00:31:29,534 | INFO     | collected zombie processes
[2025-11-24 16:32:29] 2025-11-25 00:31:29,534 | INFO     | will attempt to kill all subprocesses of pid=149335
[2025-11-24 16:32:29] 2025-11-25 00:31:30,483 | INFO     | process IDs to be killed: [149335] (in reverse order)
[2025-11-24 16:32:29] 2025-11-25 00:31:30,649 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:32:29] 2025-11-25 00:31:30,649 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:32:29] 2025-11-25 00:31:30,690 | INFO     | did not find any defunct processes belonging to 149335
[2025-11-24 16:32:29] 2025-11-25 00:31:30,714 | INFO     | did not find any defunct processes belonging to 149335
[2025-11-24 16:32:29] 2025-11-25 00:31:30,715 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:32:29] 2025-11-25 00:31:30,715 | INFO     | ready for new job
[2025-11-24 16:32:29] 2025-11-25 00:31:30,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:32:29] 2025-11-25 00:31:30,721 | INFO     | ***************************************
[2025-11-24 16:32:29] 2025-11-25 00:31:30,721 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:32:29] 2025-11-25 00:31:30,721 | INFO     | ***************************************
[2025-11-24 16:32:29] 2025-11-25 00:31:30,721 | INFO     | 
[2025-11-24 16:32:29] 2025-11-25 00:31:30,723 | INFO     | architecture information:
[2025-11-24 16:32:29] 2025-11-25 00:31:30,743 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:32:29] 2025-11-25 00:31:30,789 | INFO     | cat /etc/os-release:
[2025-11-24 16:32:29] NAME="CentOS Linux"
[2025-11-24 16:32:29] VERSION="7 (Core)"
[2025-11-24 16:32:29] ID="centos"
[2025-11-24 16:32:29] ID_LIKE="rhel fedora"
[2025-11-24 16:32:29] VERSION_ID="7"
[2025-11-24 16:32:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:32:29] ANSI_COLOR="0;31"
[2025-11-24 16:32:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:32:29] HOME_URL="https://www.centos.org/"
[2025-11-24 16:32:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:32:29] 
[2025-11-24 16:32:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:32:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:32:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:32:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:32:29] 
[2025-11-24 16:32:29] 2025-11-25 00:31:30,789 | INFO     | ***************************************
[2025-11-24 16:32:29] 2025-11-25 00:31:31,305 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 16:32:29] 2025-11-25 00:31:31,357 | INFO     | sufficient remaining disk space (764360523776 B)
[2025-11-24 16:32:29] 2025-11-25 00:31:31,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:32:29] 2025-11-25 00:31:31,358 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:32:29] 2025-11-25 00:31:31,358 | INFO     | update_server=False
[2025-11-24 16:32:29] 2025-11-25 00:31:31,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:32:29] 2025-11-25 00:31:31,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:32:29] 2025-11-25 00:31:31,568 | INFO     | all data control threads have been joined
[2025-11-24 16:32:29] 2025-11-25 00:31:32,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:32:29] 2025-11-25 00:31:32,293 | INFO     | aborting loop
[2025-11-24 16:32:29] 2025-11-25 00:31:32,364 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:32,423 | INFO     | all job control threads have been joined
[2025-11-24 16:32:29] 2025-11-25 00:31:32,474 | INFO     | all payload control threads have been joined
[2025-11-24 16:32:29] 2025-11-25 00:31:32,574 | INFO     | [data] control thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:32,610 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:32,680 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:32,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,012 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,016 | INFO     | [job] validate thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,020 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,022 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:32:29] 2025-11-25 00:31:33,299 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:32:29] 2025-11-25 00:31:33,381 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,430 | INFO     | [job] control thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,480 | INFO     | [payload] control thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:33,522 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:34,319 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:31:37,036 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:32:29] 2025-11-25 00:32:01,416 | INFO     | PID=136886 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 16:32:29] 2025-11-25 00:32:01,416 | INFO     | .. there are 35 such processes running
[2025-11-24 16:32:29] 2025-11-25 00:32:01,416 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:32:29] 2025-11-25 00:32:01,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:32:29] 2025-11-25 00:32:01,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:32:29] 2025-11-25 00:32:20,249 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:32:29] 2025-11-25 00:32:22,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918910826304)>', '<ExcThread(monitor, started 139917971658496)>']
[2025-11-24 16:32:29] 2025-11-25 00:32:22,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:32:29] 2025-11-25 00:32:22,543 | INFO     | [monitor] control thread has ended
[2025-11-24 16:32:29] 2025-11-25 00:32:27,062 | INFO     | all workflow threads have been joined
[2025-11-24 16:32:29] 2025-11-25 00:32:27,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:32:29] 2025-11-25 00:32:27,062 | INFO     | traces error code: 0
[2025-11-24 16:32:29] 2025-11-25 00:32:27,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:32:29] 2025-11-25 00:32:28,160 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:32:29] 2025-11-25 00:32:28,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:32:29] 2025-11-25 00:32:28,165 [wrapper] pilotpid: 136886
[2025-11-24 16:32:29] 2025-11-25 00:32:28,167 [wrapper] Pilot exit status: 0
[2025-11-24 16:32:29] 2025-11-25 00:32:28,350 [wrapper] pandaids: 6895651689
[2025-11-24 16:32:29] 2025-11-25 00:32:28,450 [wrapper] cleanup supervisor_pilot  136895 136887
[2025-11-24 16:32:29] 2025-11-25 00:32:28,452 [wrapper] Test setup, not cleaning
[2025-11-24 16:32:29] 2025-11-25 00:32:28,457 [wrapper] apfmon messages muted
[2025-11-24 16:32:29] 2025-11-25 00:32:28,490 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:32:29] 2025-11-25 00:32:28,517 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:32:29]  *** Error codes and diagnostics ***
[2025-11-24 16:32:29]     "exeErrorCode": 65,
[2025-11-24 16:32:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 16:32:29]     "pilotErrorCode": 1305,
[2025-11-24 16:32:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 16:32:29]  *** Listing of results directory ***
[2025-11-24 16:32:29] total 404292
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc    576529 Nov 24 04:18 pilot3.tar.gz
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc      5112 Nov 24 04:36 queuedata.json
[2025-11-24 16:32:29] -rwx------. 1 boinc boinc     36292 Nov 24 04:37 runpilot2-wrapper.sh
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc       100 Nov 24 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:32:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 16:23 run_atlas
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc       105 Nov 24 16:23 job.xml
[2025-11-24 16:32:29] -rw-r--r--. 2 boinc boinc 409735280 Nov 24 16:23 EVNT.47483658._002043.pool.root.1
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc      6594 Nov 24 16:23 init_data.xml
[2025-11-24 16:32:29] -rw-r--r--. 2 boinc boinc     15847 Nov 24 16:23 start_atlas.sh
[2025-11-24 16:32:29] drwxrwx--x. 2 boinc boinc      4096 Nov 24 16:23 shared
[2025-11-24 16:32:29] -rw-r--r--. 2 boinc boinc    590104 Nov 24 16:23 input.tar.gz
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc         0 Nov 24 16:23 boinc_lockfile
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc      2784 Nov 24 16:23 pandaJob.out
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc    991801 Nov 24 16:24 agis_schedconf.cvmfs.json
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc   1516227 Nov 24 16:24 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:32:29] drwx------. 5 boinc boinc      4096 Nov 24 16:24 pilot3
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc       524 Nov 24 16:27 boinc_task_state.xml
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc      1019 Nov 24 16:29 memory_monitor_summary.json
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc     50862 Nov 24 16:29 log.47556161._000267.job.log.tgz.1
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc        95 Nov 24 16:31 pilot_heartbeat.json
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc     10340 Nov 24 16:31 heartbeat.json
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc      4821 Nov 24 16:32 pilotlog.txt
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc    118654 Nov 24 16:32 log.47556161._000267.job.log.1
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc      8192 Nov 24 16:32 boinc_mmap_file
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc        23 Nov 24 16:32 wrapper_checkpoint.txt
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc       186 Nov 24 16:32 output.list
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc       620 Nov 24 16:32 runtime_log
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc    194560 Nov 24 16:32 result.tar.gz
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc      8636 Nov 24 16:32 runtime_log.err
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc       647 Nov 24 16:32 BfLODmH0kh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmW3IKDmmujEfm.diag
[2025-11-24 16:32:29] -rw-r--r--. 1 boinc boinc     22628 Nov 24 16:32 stderr.txt
[2025-11-24 16:32:29] No HITS result produced
[2025-11-24 16:32:29]  *** Contents of shared directory: ***
[2025-11-24 16:32:29] total 400928
[2025-11-24 16:32:29] -rw-r--r--. 2 boinc boinc 409735280 Nov 24 16:23 ATLAS.root_0
[2025-11-24 16:32:29] -rw-r--r--. 2 boinc boinc     15847 Nov 24 16:23 start_atlas.sh
[2025-11-24 16:32:29] -rw-r--r--. 2 boinc boinc    590104 Nov 24 16:23 input.tar.gz
[2025-11-24 16:32:29] -rw-------. 1 boinc boinc    194560 Nov 24 16:32 result.tar.gz
16:32:30 (132836): run_atlas exited; CPU time 53.911235
16:32:30 (132836): called boinc_finish(0)

</stderr_txt>
]]>

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