Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:36:15 (3208214): wrapper (7.7.26015): starting
19:36:15 (3208214): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 19:36:15] Arguments: --nthreads 4
[2025-11-27 19:36:15] Threads: 4
[2025-11-27 19:36:15] Checking for CVMFS
[2025-11-27 19:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:36:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:36:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:36:15] 2.9.2.0 1281416 12876 110420 153379 2 81 33496877 36864001 0 130560 1 5426606 99.893 738926 1152 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 19:36:15] CVMFS is ok
[2025-11-27 19:36:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:36:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:36:15] Further information can be found at the LHC@home message board.
[2025-11-27 19:36:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:36:15] Checking for apptainer binary...
[2025-11-27 19:36:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:36:15] Running /usr/bin/apptainer --version
[2025-11-27 19:36:15] apptainer version 1.4.1-1.1
[2025-11-27 19:36:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:36:15] magicA244a
[2025-11-27 19:36:15] apptainer works
[2025-11-27 19:36:15] Set ATHENA_PROC_NUMBER=4
[2025-11-27 19:36:15] Set ATHENA_CORE_NUMBER=4
[2025-11-27 19:36:15] Starting ATLAS job with PandaID=6893857513
[2025-11-27 19:36:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:35:54]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:35:54] 2025-11-28 00:35:22,557 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 01:35:54] 2025-11-28 00:35:22,570 | INFO     | sufficient remaining disk space (322425585664 B)
[2025-11-28 01:35:54] 2025-11-28 00:35:22,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:35:54] 2025-11-28 00:35:22,570 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:35:54] 2025-11-28 00:35:22,570 | INFO     | update_server=False
[2025-11-28 01:35:54] 2025-11-28 00:35:22,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:35:54] 2025-11-28 00:35:22,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:35:54] 2025-11-28 00:35:22,949 | INFO     | all payload control threads have been joined
[2025-11-28 01:35:54] 2025-11-28 00:35:23,022 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 01:35:54] 2025-11-28 00:35:23,022 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 01:35:54] 2025-11-28 00:35:23,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:35:54] 2025-11-28 00:35:23,023 | INFO     | will abort loop
[2025-11-28 01:35:54] 2025-11-28 00:35:23,185 | INFO     | all job control threads have been joined
[2025-11-28 01:35:54] 2025-11-28 00:35:23,328 | INFO     | all data control threads have been joined
[2025-11-28 01:35:54] 2025-11-28 00:35:23,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:35:54] 2025-11-28 00:35:23,576 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:23,576 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:23,906 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:23,954 | INFO     | [payload] control thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:23,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:35:54] 2025-11-28 00:35:24,028 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,067 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,191 | INFO     | [job] control thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,334 | INFO     | [data] control thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,652 | INFO     | [job] validate thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,652 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,840 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,880 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:24,993 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:25,999 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:27,347 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:33,064 | INFO     | job.realtimelogging is not enabled
[2025-11-28 01:35:54] 2025-11-28 00:35:34,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:35:54] 2025-11-28 00:35:49,296 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:35:54] 2025-11-28 00:35:49,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370910762816)>', '<ExcThread(monitor, started 140370176362240)>']
[2025-11-28 01:35:54] 2025-11-28 00:35:53,160 | INFO     | PID=3211997 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 01:35:54] 2025-11-28 00:35:53,160 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:35:54] 2025-11-28 00:35:53,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:35:54] 2025-11-28 00:35:53,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:35:54] 2025-11-28 00:35:53,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:35:54] 2025-11-28 00:35:53,160 | INFO     | [monitor] control thread has ended
[2025-11-28 01:35:54] 2025-11-28 00:35:54,840 | INFO     | all workflow threads have been joined
[2025-11-28 01:35:54] 2025-11-28 00:35:54,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:35:54] 2025-11-28 00:35:54,840 | INFO     | traces error code: 0
[2025-11-28 01:35:54] 2025-11-28 00:35:54,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:35:54] 2025-11-28 00:35:54,895 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:35:54] 2025-11-28 00:35:54,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:35:54] 2025-11-28 00:35:54,901 [wrapper] pilotpid: 3211997
[2025-11-28 01:35:54] 2025-11-28 00:35:54,903 [wrapper] Pilot exit status: 0
[2025-11-28 01:35:54] 2025-11-28 00:35:54,911 [wrapper] pandaids: 6893857513
[2025-11-28 01:35:54] 2025-11-28 00:35:54,929 [wrapper] cleanup supervisor_pilot 3258525 3211998
[2025-11-28 01:35:54] 2025-11-28 00:35:54,932 [wrapper] Test setup, not cleaning
[2025-11-28 01:35:54] 2025-11-28 00:35:54,934 [wrapper] apfmon messages muted
[2025-11-28 01:35:54] 2025-11-28 00:35:54,937 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:35:54] 2025-11-28 00:35:54,939 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:35:54]  *** Error codes and diagnostics ***
[2025-11-28 01:35:54]     "exeErrorCode": 0,
[2025-11-28 01:35:54]     "exeErrorDiag": "",
[2025-11-28 01:35:54]     "pilotErrorCode": 0,
[2025-11-28 01:35:54]     "pilotErrorDiag": "",
[2025-11-28 01:35:54]  *** Listing of results directory ***
[2025-11-28 01:35:54] total 1297652
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-28 01:35:54] -rwx------ 1 boinc boinc     36292 Nov 20 14:05 runpilot2-wrapper.sh
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:05 queuedata.json
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc       100 Nov 27 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:35:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 19:36 run_atlas
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc       105 Nov 27 19:36 job.xml
[2025-11-28 01:35:54] -rw-r--r-- 2 boinc boinc 408658274 Nov 27 19:36 EVNT.47493127._000490.pool.root.1
[2025-11-28 01:35:54] -rw-r--r-- 2 boinc boinc    590102 Nov 27 19:36 input.tar.gz
[2025-11-28 01:35:54] -rw-r--r-- 2 boinc boinc     15847 Nov 27 19:36 start_atlas.sh
[2025-11-28 01:35:54] drwxrwx--x 2 boinc boinc      4096 Nov 27 19:36 shared
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc         0 Nov 27 19:36 boinc_setup_complete
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc      6439 Nov 27 19:36 init_data.xml
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc         0 Nov 27 19:36 boinc_lockfile
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc      2786 Nov 27 19:36 pandaJob.out
[2025-11-28 01:35:54] -rw------- 1 boinc boinc    991223 Nov 27 19:36 agis_schedconf.cvmfs.json
[2025-11-28 01:35:54] drwx------ 5 boinc boinc      4096 Nov 27 19:36 pilot3
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc       531 Nov 28 01:32 boinc_task_state.xml
[2025-11-28 01:35:54] -rw------- 1 boinc boinc 907715336 Nov 28 01:34 HITS.47523449._004896.pool.root.1
[2025-11-28 01:35:54] -rw------- 1 boinc boinc      1025 Nov 28 01:35 memory_monitor_summary.json
[2025-11-28 01:35:54] -rw------- 1 boinc boinc        95 Nov 28 01:35 pilot_heartbeat.json
[2025-11-28 01:35:54] -rw------- 1 boinc boinc   1516240 Nov 28 01:35 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:35:54] -rw------- 1 boinc boinc   1215806 Nov 28 01:35 log.47523449._004896.job.log.tgz.1
[2025-11-28 01:35:54] -rw------- 1 boinc boinc      8572 Nov 28 01:35 heartbeat.json
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc        28 Nov 28 01:35 wrapper_checkpoint.txt
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc      8192 Nov 28 01:35 boinc_mmap_file
[2025-11-28 01:35:54] -rw------- 1 boinc boinc      5010 Nov 28 01:35 pilotlog.txt
[2025-11-28 01:35:54] -rw------- 1 boinc boinc   3042394 Nov 28 01:35 log.47523449._004896.job.log.1
[2025-11-28 01:35:54] -rw------- 1 boinc boinc       353 Nov 28 01:35 output.list
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc       620 Nov 28 01:35 runtime_log
[2025-11-28 01:35:54] -rw------- 1 boinc boinc   4280320 Nov 28 01:35 result.tar.gz
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc      8918 Nov 28 01:35 runtime_log.err
[2025-11-28 01:35:54] -rw------- 1 boinc boinc       669 Nov 28 01:35 2E5KDmPXJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSgGKDmGW4Lbn.diag
[2025-11-28 01:35:54] -rw-r--r-- 1 boinc boinc      8193 Nov 28 01:35 stderr.txt
[2025-11-28 01:35:54] HITS file was successfully produced:
[2025-11-28 01:35:54] -rw------- 1 boinc boinc 907715336 Nov 28 01:34 shared/HITS.pool.root.1
[2025-11-28 01:35:54]  *** Contents of shared directory: ***
[2025-11-28 01:35:55] total 1290312
[2025-11-28 01:35:55] -rw-r--r-- 2 boinc boinc 408658274 Nov 27 19:36 ATLAS.root_0
[2025-11-28 01:35:55] -rw-r--r-- 2 boinc boinc    590102 Nov 27 19:36 input.tar.gz
[2025-11-28 01:35:55] -rw-r--r-- 2 boinc boinc     15847 Nov 27 19:36 start_atlas.sh
[2025-11-28 01:35:55] -rw------- 1 boinc boinc 907715336 Nov 28 01:34 HITS.pool.root.1
[2025-11-28 01:35:55] -rw------- 1 boinc boinc   4280320 Nov 28 01:35 result.tar.gz
01:35:56 (3208214): run_atlas exited; CPU time 84188.405550
01:35:56 (3208214): called boinc_finish(0)

</stderr_txt>
]]>

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