Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:23:26 (23100): wrapper (7.7.26015): starting
19:23:26 (23100): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 19:23:26] Arguments: --nthreads 12
[2025-11-24 19:23:26] Threads: 12
[2025-11-24 19:23:26] Checking for CVMFS
[2025-11-24 19:23:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:23:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:23:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:23:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:23:26] 2.11.2.0 3165 71138 91652 153264 3 56 16187136 20275201 1 130560 0 29768732 99.914 3897842 36677 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 19:23:26] CVMFS is ok
[2025-11-24 19:23:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:23:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:23:26] Further information can be found at the LHC@home message board.
[2025-11-24 19:23:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:23:26] Checking for apptainer binary...
[2025-11-24 19:23:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:23:26] Running /usr/bin/apptainer --version
[2025-11-24 19:23:26] apptainer version 1.3.2-1.el7
[2025-11-24 19:23:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:23:28] c-115-40.aglt2.org
[2025-11-24 19:23:28] apptainer works
[2025-11-24 19:23:28] Set ATHENA_PROC_NUMBER=12
[2025-11-24 19:23:28] Set ATHENA_CORE_NUMBER=12
[2025-11-24 19:23:28] Starting ATLAS job with PandaID=6895377443
[2025-11-24 19:23:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:49:29]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:49:29] 2025-11-25 06:48:55,979 | INFO     | monitor loop #1726: job 0:6895377443 is in state 'finished'
[2025-11-25 01:49:29] 2025-11-25 06:48:55,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:49:29] 2025-11-25 06:48:56,013 | INFO     | time since job start (23114s) is within the limit (172800.0s)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,354 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 01:49:29] 2025-11-25 06:48:57,358 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1740.1666666666667
[2025-11-25 01:49:29] 2025-11-25 06:48:57,360 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895377443/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,361 | INFO     | extracted standard info from prmon json
[2025-11-25 01:49:29] 2025-11-25 06:48:57,361 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:49:29] 2025-11-25 06:48:57,361 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:49:29] 2025-11-25 06:48:57,369 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:49:29] 2025-11-25 06:48:57,370 | INFO     | sum of square deviations: 16880975973.688738
[2025-11-25 01:49:29] 2025-11-25 06:48:57,373 | INFO     | sum of deviations: 236092582815.1561
[2025-11-25 01:49:29] 2025-11-25 06:48:57,373 | INFO     | mean x: 1764041781.2137203
[2025-11-25 01:49:29] 2025-11-25 06:48:57,373 | INFO     | mean y: 4034083.3931398415
[2025-11-25 01:49:29] 2025-11-25 06:48:57,373 | INFO     | intersect: -24667358196.871414
[2025-11-25 01:49:29] 2025-11-25 06:48:57,373 | INFO     | chi2: 5.833767355493866
[2025-11-25 01:49:29] 2025-11-25 06:48:57,374 | INFO     | sum of square deviations: 16221667385.95712
[2025-11-25 01:49:29] 2025-11-25 06:48:57,377 | INFO     | sum of deviations: 411750472631.9517
[2025-11-25 01:49:29] 2025-11-25 06:48:57,377 | INFO     | mean x: 1764041628.7165775
[2025-11-25 01:49:29] 2025-11-25 06:48:57,377 | INFO     | mean y: 4074654.056149733
[2025-11-25 01:49:29] 2025-11-25 06:48:57,377 | INFO     | intersect: -44772146993.49629
[2025-11-25 01:49:29] 2025-11-25 06:48:57,377 | INFO     | chi2: 2.6789179837456207
[2025-11-25 01:49:29] 2025-11-25 06:48:57,378 | INFO     | current chi2=2.6789179837456207 (change=54.07910839600437 %)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,378 | INFO     | sum of square deviations: 15579731902.655762
[2025-11-25 01:49:29] 2025-11-25 06:48:57,381 | INFO     | sum of deviations: 450967190412.3035
[2025-11-25 01:49:29] 2025-11-25 06:48:57,381 | INFO     | mean x: 1764041476.2168021
[2025-11-25 01:49:29] 2025-11-25 06:48:57,381 | INFO     | mean y: 4083905.596205962
[2025-11-25 01:49:29] 2025-11-25 06:48:57,381 | INFO     | intersect: -51057438415.25043
[2025-11-25 01:49:29] 2025-11-25 06:48:57,381 | INFO     | chi2: 2.3332771348420334
[2025-11-25 01:49:29] 2025-11-25 06:48:57,382 | INFO     | current chi2=2.3332771348420334 (change=12.902255724168077 %)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,382 | INFO     | right removable region: 368
[2025-11-25 01:49:29] 2025-11-25 06:48:57,382 | INFO     | sum of square deviations: 16221617975.95712
[2025-11-25 01:49:29] 2025-11-25 06:48:57,385 | INFO     | sum of deviations: 98748393969.49179
[2025-11-25 01:49:29] 2025-11-25 06:48:57,385 | INFO     | mean x: 1764041933.7165775
[2025-11-25 01:49:29] 2025-11-25 06:48:57,385 | INFO     | mean y: 4065721.2593582887
[2025-11-25 01:49:29] 2025-11-25 06:48:57,385 | INFO     | intersect: -10734462834.124815
[2025-11-25 01:49:29] 2025-11-25 06:48:57,386 | INFO     | chi2: 3.6223041133739806
[2025-11-25 01:49:29] 2025-11-25 06:48:57,386 | INFO     | current chi2=3.6223041133739806 (change=37.9079779387718 %)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,386 | INFO     | sum of square deviations: 15579655653.219505
[2025-11-25 01:49:29] 2025-11-25 06:48:57,389 | INFO     | sum of deviations: 70486795840.97559
[2025-11-25 01:49:29] 2025-11-25 06:48:57,389 | INFO     | mean x: 1764042086.2195122
[2025-11-25 01:49:29] 2025-11-25 06:48:57,389 | INFO     | mean y: 4072422.864498645
[2025-11-25 01:49:29] 2025-11-25 06:48:57,389 | INFO     | intersect: -7976955987.127891
[2025-11-25 01:49:29] 2025-11-25 06:48:57,390 | INFO     | chi2: 3.57683838861018
[2025-11-25 01:49:29] 2025-11-25 06:48:57,390 | INFO     | current chi2=3.57683838861018 (change=1.2551603438246866 %)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,390 | INFO     | left removable region: 20
[2025-11-25 01:49:29] 2025-11-25 06:48:57,390 | INFO     | sum of square deviations: 13068257041.51718
[2025-11-25 01:49:29] 2025-11-25 06:48:57,393 | INFO     | sum of deviations: 248992964884.03427
[2025-11-25 01:49:29] 2025-11-25 06:48:57,393 | INFO     | mean x: 1764042055.724138
[2025-11-25 01:49:29] 2025-11-25 06:48:57,393 | INFO     | mean y: 4132931.0316091953
[2025-11-25 01:49:29] 2025-11-25 06:48:57,393 | INFO     | intersect: -33606627879.645435
[2025-11-25 01:49:29] 2025-11-25 06:48:57,394 | INFO     | chi2: 0.01485200910173054
[2025-11-25 01:49:29] 2025-11-25 06:48:57,394 | INFO     | current memory leak: 19.05 B/s (using 348 data points, chi2=0.01)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,394 | INFO     | could have reported an average CPU frequency of 2594 MHz (16 samples)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,394 | INFO     | ..............................
[2025-11-25 01:49:29] 2025-11-25 06:48:57,394 | INFO     | . Timing measurements:
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . get job = 0 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . initial setup = 2 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . payload setup = 7 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . stage-in = 0 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . payload execution = 23075 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . stage-out = 2 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | . log creation = 0 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,395 | INFO     | ..............................
[2025-11-25 01:49:29] 2025-11-25 06:48:57,471 | INFO     | 
[2025-11-25 01:49:29] 2025-11-25 06:48:57,472 | INFO     | job summary report
[2025-11-25 01:49:29] 2025-11-25 06:48:57,472 | INFO     | --------------------------------------------------
[2025-11-25 01:49:29] 2025-11-25 06:48:57,472 | INFO     | PanDA job id: 6895377443
[2025-11-25 01:49:29] 2025-11-25 06:48:57,472 | INFO     | task id: 47556137
[2025-11-25 01:49:29] 2025-11-25 06:48:57,472 | INFO     | errors: (none)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,472 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:49:29] 2025-11-25 06:48:57,473 | INFO     | pilot state: finished 
[2025-11-25 01:49:29] 2025-11-25 06:48:57,473 | INFO     | transexitcode: 0
[2025-11-25 01:49:29] 2025-11-25 06:48:57,473 | INFO     | exeerrorcode: 0
[2025-11-25 01:49:29] 2025-11-25 06:48:57,473 | INFO     | exeerrordiag: 
[2025-11-25 01:49:29] 2025-11-25 06:48:57,473 | INFO     | exitcode: 0
[2025-11-25 01:49:29] 2025-11-25 06:48:57,473 | INFO     | exitmsg: OK
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | cpuconsumptiontime: 267233 s
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | nevents: 1000
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | neventsw: 0
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | pid: 830
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | pgrp: 830
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | corecount: 12
[2025-11-25 01:49:29] 2025-11-25 06:48:57,474 | INFO     | event service: False
[2025-11-25 01:49:29] 2025-11-25 06:48:57,475 | INFO     | sizes: {0: 2284026, 1: 2284281, 6: 2284543, 12: 2284571, 23087: 2320359, 23090: 2329353, 23092: 2329537, 23099: 2329783}
[2025-11-25 01:49:29] 2025-11-25 06:48:57,475 | INFO     | --------------------------------------------------
[2025-11-25 01:49:29] 2025-11-25 06:48:57,475 | INFO     | 
[2025-11-25 01:49:29] 2025-11-25 06:48:57,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 01:49:29] 2025-11-25 06:48:57,501 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,501 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,504 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:49:29] 2025-11-25 06:48:57,504 | INFO     | job 6895377443 has completed (purged errors)
[2025-11-25 01:49:29] 2025-11-25 06:48:57,504 | INFO     | overall cleanup function is called
[2025-11-25 01:49:29] 2025-11-25 06:48:58,521 | INFO     | --- collectZombieJob: --- 10, [830]
[2025-11-25 01:49:29] 2025-11-25 06:48:58,521 | INFO     | zombie collector waiting for pid 830
[2025-11-25 01:49:29] 2025-11-25 06:48:58,521 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:49:29] 2025-11-25 06:48:58,521 | INFO     | collected zombie processes
[2025-11-25 01:49:29] 2025-11-25 06:48:58,521 | INFO     | will attempt to kill all subprocesses of pid=830
[2025-11-25 01:49:29] 2025-11-25 06:48:58,607 | INFO     | process IDs to be killed: [830] (in reverse order)
[2025-11-25 01:49:29] 2025-11-25 06:48:58,655 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:49:29] 2025-11-25 06:48:58,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:49:29] 2025-11-25 06:48:58,659 | INFO     | did not find any defunct processes belonging to 830
[2025-11-25 01:49:29] 2025-11-25 06:48:58,663 | INFO     | did not find any defunct processes belonging to 830
[2025-11-25 01:49:29] 2025-11-25 06:48:58,665 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:49:29] 2025-11-25 06:48:58,665 | INFO     | ready for new job
[2025-11-25 01:49:29] 2025-11-25 06:48:58,665 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:49:29] 2025-11-25 06:48:58,667 | INFO     | ***************************************
[2025-11-25 01:49:29] 2025-11-25 06:48:58,667 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:49:29] 2025-11-25 06:48:58,667 | INFO     | ***************************************
[2025-11-25 01:49:29] 2025-11-25 06:48:58,667 | INFO     | 
[2025-11-25 01:49:29] 2025-11-25 06:48:58,668 | INFO     | architecture information:
[2025-11-25 01:49:29] 2025-11-25 06:48:58,668 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:49:29] 2025-11-25 06:48:58,683 | INFO     | cat /etc/os-release:
[2025-11-25 01:49:29] NAME="CentOS Linux"
[2025-11-25 01:49:29] VERSION="7 (Core)"
[2025-11-25 01:49:29] ID="centos"
[2025-11-25 01:49:29] ID_LIKE="rhel fedora"
[2025-11-25 01:49:29] VERSION_ID="7"
[2025-11-25 01:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:49:29] ANSI_COLOR="0;31"
[2025-11-25 01:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:49:29] HOME_URL="https://www.centos.org/"
[2025-11-25 01:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:49:29] 
[2025-11-25 01:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:49:29] 
[2025-11-25 01:49:29] 2025-11-25 06:48:58,683 | INFO     | ***************************************
[2025-11-25 01:49:29] 2025-11-25 06:48:59,186 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 01:49:29] 2025-11-25 06:48:59,203 | INFO     | sufficient remaining disk space (17589862400 B)
[2025-11-25 01:49:29] 2025-11-25 06:48:59,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:49:29] 2025-11-25 06:48:59,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:49:29] 2025-11-25 06:48:59,203 | INFO     | update_server=False
[2025-11-25 01:49:29] 2025-11-25 06:48:59,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:49:29] 2025-11-25 06:48:59,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:49:29] 2025-11-25 06:48:59,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:49:29] 2025-11-25 06:48:59,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:49:29] 2025-11-25 06:48:59,500 | INFO     | aborting loop
[2025-11-25 01:49:29] 2025-11-25 06:48:59,505 | INFO     | all payload control threads have been joined
[2025-11-25 01:49:29] 2025-11-25 06:48:59,662 | INFO     | all job control threads have been joined
[2025-11-25 01:49:29] 2025-11-25 06:49:00,115 | INFO     | all data control threads have been joined
[2025-11-25 01:49:29] 2025-11-25 06:49:00,209 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,210 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,418 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,481 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,494 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,505 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,511 | INFO     | [payload] control thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,667 | INFO     | [job] control thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:00,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:49:29] 2025-11-25 06:49:01,012 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:01,121 | INFO     | [data] control thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:01,363 | INFO     | [job] validate thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:01,364 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:01,380 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:01,397 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:04,929 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:10,136 | INFO     | job.realtimelogging is not enabled
[2025-11-25 01:49:29] 2025-11-25 06:49:11,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:49:29] 2025-11-25 06:49:20,391 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:49:29] 2025-11-25 06:49:21,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263830345536)>', '<ExcThread(monitor, started 140262995113728)>']
[2025-11-25 01:49:29] 2025-11-25 06:49:26,817 | INFO     | all workflow threads have been joined
[2025-11-25 01:49:29] 2025-11-25 06:49:26,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:49:29] 2025-11-25 06:49:26,818 | INFO     | traces error code: 0
[2025-11-25 01:49:29] 2025-11-25 06:49:26,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:49:29] 2025-11-25 06:49:29,213 | INFO     | PID=26770 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 01:49:29] 2025-11-25 06:49:29,213 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:49:29] 2025-11-25 06:49:29,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:49:29] 2025-11-25 06:49:29,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:49:29] 2025-11-25 06:49:29,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:49:29] 2025-11-25 06:49:29,213 | INFO     | [monitor] control thread has ended
[2025-11-25 01:49:29] 2025-11-25 06:49:29,307 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:49:29] 2025-11-25 06:49:29,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:49:29] 2025-11-25 06:49:29,314 [wrapper] pilotpid: 26770
[2025-11-25 01:49:29] 2025-11-25 06:49:29,318 [wrapper] Pilot exit status: 0
[2025-11-25 01:49:29] 2025-11-25 06:49:29,331 [wrapper] pandaids: 6895377443
[2025-11-25 01:49:29] 2025-11-25 06:49:29,368 [wrapper] cleanup supervisor_pilot  3633 26771
[2025-11-25 01:49:29] 2025-11-25 06:49:29,372 [wrapper] Test setup, not cleaning
[2025-11-25 01:49:29] 2025-11-25 06:49:29,376 [wrapper] apfmon messages muted
[2025-11-25 01:49:29] 2025-11-25 06:49:29,380 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:49:29] 2025-11-25 06:49:29,384 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:49:29]  *** Error codes and diagnostics ***
[2025-11-25 01:49:29]     "exeErrorCode": 0,
[2025-11-25 01:49:29]     "exeErrorDiag": "",
[2025-11-25 01:49:29]     "pilotErrorCode": 0,
[2025-11-25 01:49:29]     "pilotErrorDiag": "",
[2025-11-25 01:49:29]  *** Listing of results directory ***
[2025-11-25 01:49:29] total 1311504
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 19:34 pilot3.tar.gz
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 19:54 queuedata.json
[2025-11-25 01:49:29] -rwx------ 1 boincer umatlas     36292 Nov 23 19:55 runpilot2-wrapper.sh
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas       100 Nov 24 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:49:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 19:23 run_atlas
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas       105 Nov 24 19:23 job.xml
[2025-11-25 01:49:29] -rw-r--r-- 2 boincer umatlas 410782186 Nov 24 19:23 EVNT.47483658._000971.pool.root.1
[2025-11-25 01:49:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 19:23 start_atlas.sh
[2025-11-25 01:49:29] drwxrwx--x 2 boincer umatlas      4096 Nov 24 19:23 shared
[2025-11-25 01:49:29] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 19:23 input.tar.gz
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas         0 Nov 24 19:23 boinc_lockfile
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas      2782 Nov 24 19:23 pandaJob.out
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas        57 Nov 24 19:23 setup.sh.local
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas    991801 Nov 24 19:23 agis_schedconf.cvmfs.json
[2025-11-25 01:49:29] drwx------ 5 boincer umatlas      4096 Nov 24 19:23 pilot3
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas       532 Nov 25 01:39 boinc_task_state.xml
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas      5957 Nov 25 01:47 init_data.xml
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas 917548434 Nov 25 01:48 HITS.47556137._009571.pool.root.1
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas        95 Nov 25 01:48 pilot_heartbeat.json
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas      1058 Nov 25 01:48 memory_monitor_summary.json
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas   1516227 Nov 25 01:48 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas   2147336 Nov 25 01:48 log.47556137._009571.job.log.tgz.1
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas      8665 Nov 25 01:48 heartbeat.json
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 01:49 boinc_mmap_file
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas        29 Nov 25 01:49 wrapper_checkpoint.txt
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas       745 Nov 25 01:49 pilotlog.txt
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas   3223085 Nov 25 01:49 log.47556137._009571.job.log.1
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas       353 Nov 25 01:49 output.list
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas       620 Nov 25 01:49 runtime_log
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas   5386240 Nov 25 01:49 result.tar.gz
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 01:49 runtime_log.err
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas       669 Nov 25 01:49 aEMODmZ2Zh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2rIKDmFqsPLo.diag
[2025-11-25 01:49:29] -rw-r--r-- 1 boincer umatlas     21289 Nov 25 01:49 stderr.txt
[2025-11-25 01:49:29] HITS file was successfully produced:
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas 917548434 Nov 25 01:48 shared/HITS.pool.root.1
[2025-11-25 01:49:29]  *** Contents of shared directory: ***
[2025-11-25 01:49:29] total 1303060
[2025-11-25 01:49:29] -rw-r--r-- 2 boincer umatlas 410782186 Nov 24 19:23 ATLAS.root_0
[2025-11-25 01:49:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 19:23 start_atlas.sh
[2025-11-25 01:49:29] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 19:23 input.tar.gz
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas 917548434 Nov 25 01:48 HITS.pool.root.1
[2025-11-25 01:49:29] -rw------- 1 boincer umatlas   5386240 Nov 25 01:49 result.tar.gz
01:49:30 (23100): run_atlas exited; CPU time 264098.260388
01:49:30 (23100): called boinc_finish(0)

</stderr_txt>
]]>

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