Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:21:17 (9009): wrapper (7.7.26015): starting
19:21:17 (9009): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 19:21:17] Arguments: --nthreads 12
[2025-11-24 19:21:17] Threads: 12
[2025-11-24 19:21:17] Checking for CVMFS
[2025-11-24 19:21:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:21:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:21:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:21:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:21:17] 2.11.2.0 6893 115428 92000 153264 1 71 19007407 20275200 1 130560 0 49409106 99.932 5940913 31074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 19:21:17] CVMFS is ok
[2025-11-24 19:21:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:21:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:21:17] Further information can be found at the LHC@home message board.
[2025-11-24 19:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:21:17] Checking for apptainer binary...
[2025-11-24 19:21:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:21:17] Running /usr/bin/apptainer --version
[2025-11-24 19:21:17] apptainer version 1.3.2-1.el7
[2025-11-24 19:21:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:21:19] c-205-3.aglt2.org
[2025-11-24 19:21:19] apptainer works
[2025-11-24 19:21:19] Set ATHENA_PROC_NUMBER=12
[2025-11-24 19:21:19] Set ATHENA_CORE_NUMBER=12
[2025-11-24 19:21:19] Starting ATLAS job with PandaID=6895375879
[2025-11-24 19:21:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:27:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:27:21] 2025-11-25 07:26:53,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,282 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 02:27:21] 2025-11-25 07:26:53,286 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-25 02:27:21] 2025-11-25 07:26:53,289 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895375879/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,290 | INFO     | extracted standard info from prmon json
[2025-11-25 02:27:21] 2025-11-25 07:26:53,290 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:27:21] 2025-11-25 07:26:53,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:27:21] 2025-11-25 07:26:53,298 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:27:21] 2025-11-25 07:26:53,298 | INFO     | sum of square deviations: 22646533190.44027
[2025-11-25 02:27:21] 2025-11-25 07:26:53,302 | INFO     | sum of deviations: 366586180534.07654
[2025-11-25 02:27:21] 2025-11-25 07:26:53,302 | INFO     | mean x: 1764042841.6698565
[2025-11-25 02:27:21] 2025-11-25 07:26:53,302 | INFO     | mean y: 3439199.442583732
[2025-11-25 02:27:21] 2025-11-25 07:26:53,302 | INFO     | intersect: -28551647894.382904
[2025-11-25 02:27:21] 2025-11-25 07:26:53,303 | INFO     | chi2: 4.713276086262008
[2025-11-25 02:27:21] 2025-11-25 07:26:53,303 | INFO     | sum of square deviations: 21843553742.794216
[2025-11-25 02:27:21] 2025-11-25 07:26:53,307 | INFO     | sum of deviations: 503829896838.4284
[2025-11-25 02:27:21] 2025-11-25 07:26:53,307 | INFO     | mean x: 1764042689.171913
[2025-11-25 02:27:21] 2025-11-25 07:26:53,307 | INFO     | mean y: 3465214.5714285714
[2025-11-25 02:27:21] 2025-11-25 07:26:53,307 | INFO     | intersect: -40684852106.380066
[2025-11-25 02:27:21] 2025-11-25 07:26:53,308 | INFO     | chi2: 2.3264930130539434
[2025-11-25 02:27:21] 2025-11-25 07:26:53,308 | INFO     | current chi2=2.3264930130539434 (change=50.63957700600068 %)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,309 | INFO     | sum of square deviations: 21059783957.644665
[2025-11-25 02:27:21] 2025-11-25 07:26:53,312 | INFO     | sum of deviations: 509184587237.5514
[2025-11-25 02:27:21] 2025-11-25 07:26:53,312 | INFO     | mean x: 1764042536.6740196
[2025-11-25 02:27:21] 2025-11-25 07:26:53,312 | INFO     | mean y: 3466229.8161764704
[2025-11-25 02:27:21] 2025-11-25 07:26:53,313 | INFO     | intersect: -42647648934.15445
[2025-11-25 02:27:21] 2025-11-25 07:26:53,313 | INFO     | chi2: 2.2384417803834475
[2025-11-25 02:27:21] 2025-11-25 07:26:53,313 | INFO     | current chi2=2.2384417803834475 (change=3.7847194114248666 %)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,313 | INFO     | right removable region: 407
[2025-11-25 02:27:21] 2025-11-25 07:26:53,314 | INFO     | sum of square deviations: 21843510432.79422
[2025-11-25 02:27:21] 2025-11-25 07:26:53,317 | INFO     | sum of deviations: 239288424356.69986
[2025-11-25 02:27:21] 2025-11-25 07:26:53,317 | INFO     | mean x: 1764042994.171913
[2025-11-25 02:27:21] 2025-11-25 07:26:53,318 | INFO     | mean y: 3463286.2154963682
[2025-11-25 02:27:21] 2025-11-25 07:26:53,318 | INFO     | intersect: -19321043636.405327
[2025-11-25 02:27:21] 2025-11-25 07:26:53,318 | INFO     | chi2: 2.5867064289897357
[2025-11-25 02:27:21] 2025-11-25 07:26:53,318 | INFO     | current chi2=2.5867064289897357 (change=45.11871611914858 %)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,319 | INFO     | sum of square deviations: 21059722773.99013
[2025-11-25 02:27:21] 2025-11-25 07:26:53,322 | INFO     | sum of deviations: 208954227439.99985
[2025-11-25 02:27:21] 2025-11-25 07:26:53,322 | INFO     | mean x: 1764043146.6715686
[2025-11-25 02:27:21] 2025-11-25 07:26:53,323 | INFO     | mean y: 3469181.5
[2025-11-25 02:27:21] 2025-11-25 07:26:53,323 | INFO     | intersect: -17499338278.949085
[2025-11-25 02:27:21] 2025-11-25 07:26:53,323 | INFO     | chi2: 2.5398886970038133
[2025-11-25 02:27:21] 2025-11-25 07:26:53,323 | INFO     | current chi2=2.5398886970038133 (change=1.8099360430401672 %)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,323 | INFO     | left removable region: 20
[2025-11-25 02:27:21] 2025-11-25 07:26:53,324 | INFO     | sum of square deviations: 17972371496.05168
[2025-11-25 02:27:21] 2025-11-25 07:26:53,327 | INFO     | sum of deviations: 312767048704.3592
[2025-11-25 02:27:21] 2025-11-25 07:26:53,327 | INFO     | mean x: 1764043116.1757107
[2025-11-25 02:27:21] 2025-11-25 07:26:53,327 | INFO     | mean y: 3505184.4211886306
[2025-11-25 02:27:21] 2025-11-25 07:26:53,327 | INFO     | intersect: -30695535248.541576
[2025-11-25 02:27:21] 2025-11-25 07:26:53,328 | INFO     | chi2: 0.024546374011087828
[2025-11-25 02:27:21] 2025-11-25 07:26:53,328 | INFO     | current memory leak: 17.40 B/s (using 387 data points, chi2=0.02)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,328 | INFO     | could have reported an average CPU frequency of 2326 MHz (18 samples)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | ..............................
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . Timing measurements:
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . get job = 0 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . initial setup = 2 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . payload setup = 7 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . stage-in = 0 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . payload execution = 25481 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . stage-out = 3 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,329 | INFO     | . log creation = 0 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,330 | INFO     | ..............................
[2025-11-25 02:27:21] 2025-11-25 07:26:53,451 | INFO     | time since job start (25519s) is within the limit (172800.0s)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,664 | INFO     | 
[2025-11-25 02:27:21] 2025-11-25 07:26:53,664 | INFO     | job summary report
[2025-11-25 02:27:21] 2025-11-25 07:26:53,665 | INFO     | --------------------------------------------------
[2025-11-25 02:27:21] 2025-11-25 07:26:53,665 | INFO     | PanDA job id: 6895375879
[2025-11-25 02:27:21] 2025-11-25 07:26:53,665 | INFO     | task id: 47556137
[2025-11-25 02:27:21] 2025-11-25 07:26:53,665 | INFO     | errors: (none)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:27:21] 2025-11-25 07:26:53,665 | INFO     | pilot state: finished 
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | transexitcode: 0
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | exeerrorcode: 0
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | exeerrordiag: 
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | exitcode: 0
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | exitmsg: OK
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | cpuconsumptiontime: 293643 s
[2025-11-25 02:27:21] 2025-11-25 07:26:53,666 | INFO     | nevents: 1000
[2025-11-25 02:27:21] 2025-11-25 07:26:53,667 | INFO     | neventsw: 0
[2025-11-25 02:27:21] 2025-11-25 07:26:53,667 | INFO     | pid: 19072
[2025-11-25 02:27:21] 2025-11-25 07:26:53,667 | INFO     | pgrp: 19072
[2025-11-25 02:27:21] 2025-11-25 07:26:53,667 | INFO     | corecount: 12
[2025-11-25 02:27:21] 2025-11-25 07:26:53,667 | INFO     | event service: False
[2025-11-25 02:27:21] 2025-11-25 07:26:53,667 | INFO     | sizes: {0: 2284310, 5: 2284572, 11: 2284628, 25492: 2321753, 25493: 2321752, 25497: 2330802, 25499: 2330986, 25504: 2331232}
[2025-11-25 02:27:21] 2025-11-25 07:26:53,668 | INFO     | --------------------------------------------------
[2025-11-25 02:27:21] 2025-11-25 07:26:53,668 | INFO     | 
[2025-11-25 02:27:21] 2025-11-25 07:26:53,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 02:27:21] 2025-11-25 07:26:53,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:27:21] 2025-11-25 07:26:53,695 | INFO     | job 6895375879 has completed (purged errors)
[2025-11-25 02:27:21] 2025-11-25 07:26:53,695 | INFO     | overall cleanup function is called
[2025-11-25 02:27:21] 2025-11-25 07:26:54,712 | INFO     | --- collectZombieJob: --- 10, [19072]
[2025-11-25 02:27:21] 2025-11-25 07:26:54,712 | INFO     | zombie collector waiting for pid 19072
[2025-11-25 02:27:21] 2025-11-25 07:26:54,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:27:21] 2025-11-25 07:26:54,713 | INFO     | collected zombie processes
[2025-11-25 02:27:21] 2025-11-25 07:26:54,713 | INFO     | will attempt to kill all subprocesses of pid=19072
[2025-11-25 02:27:21] 2025-11-25 07:26:54,804 | INFO     | process IDs to be killed: [19072] (in reverse order)
[2025-11-25 02:27:21] 2025-11-25 07:26:54,858 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:27:21] 2025-11-25 07:26:54,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:27:21] 2025-11-25 07:26:54,862 | INFO     | did not find any defunct processes belonging to 19072
[2025-11-25 02:27:21] 2025-11-25 07:26:54,864 | INFO     | did not find any defunct processes belonging to 19072
[2025-11-25 02:27:21] 2025-11-25 07:26:54,866 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:27:21] 2025-11-25 07:26:54,866 | INFO     | ready for new job
[2025-11-25 02:27:21] 2025-11-25 07:26:54,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:27:21] 2025-11-25 07:26:54,869 | INFO     | ***************************************
[2025-11-25 02:27:21] 2025-11-25 07:26:54,869 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:27:21] 2025-11-25 07:26:54,869 | INFO     | ***************************************
[2025-11-25 02:27:21] 2025-11-25 07:26:54,869 | INFO     | 
[2025-11-25 02:27:21] 2025-11-25 07:26:54,870 | INFO     | architecture information:
[2025-11-25 02:27:21] 2025-11-25 07:26:54,871 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:27:21] 2025-11-25 07:26:54,886 | INFO     | cat /etc/os-release:
[2025-11-25 02:27:21] NAME="CentOS Linux"
[2025-11-25 02:27:21] VERSION="7 (Core)"
[2025-11-25 02:27:21] ID="centos"
[2025-11-25 02:27:21] ID_LIKE="rhel fedora"
[2025-11-25 02:27:21] VERSION_ID="7"
[2025-11-25 02:27:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:27:21] ANSI_COLOR="0;31"
[2025-11-25 02:27:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:27:21] HOME_URL="https://www.centos.org/"
[2025-11-25 02:27:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:27:21] 
[2025-11-25 02:27:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:27:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:27:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:27:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:27:21] 
[2025-11-25 02:27:21] 2025-11-25 07:26:54,887 | INFO     | ***************************************
[2025-11-25 02:27:21] 2025-11-25 07:26:55,388 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 02:27:21] 2025-11-25 07:26:55,405 | INFO     | sufficient remaining disk space (28378660864 B)
[2025-11-25 02:27:21] 2025-11-25 07:26:55,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:27:21] 2025-11-25 07:26:55,406 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:27:21] 2025-11-25 07:26:55,406 | INFO     | update_server=False
[2025-11-25 02:27:21] 2025-11-25 07:26:55,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:27:21] 2025-11-25 07:26:55,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:27:21] 2025-11-25 07:26:55,407 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 02:27:21] 2025-11-25 07:26:55,407 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:27:21] 2025-11-25 07:26:55,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:27:21] 2025-11-25 07:26:55,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:27:21] 2025-11-25 07:26:55,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:27:21] 2025-11-25 07:26:55,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:27:21] 2025-11-25 07:26:55,577 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 02:27:21] 2025-11-25 07:26:55,577 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 02:27:21] 2025-11-25 07:26:55,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:27:21] 2025-11-25 07:26:55,582 | INFO     | will abort loop
[2025-11-25 02:27:21] 2025-11-25 07:26:56,040 | INFO     | all data control threads have been joined
[2025-11-25 02:27:21] 2025-11-25 07:26:56,397 | INFO     | all payload control threads have been joined
[2025-11-25 02:27:21] 2025-11-25 07:26:56,412 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,414 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,494 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,588 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,652 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,716 | INFO     | [job] validate thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,721 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,737 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:56,804 | INFO     | all job control threads have been joined
[2025-11-25 02:27:21] 2025-11-25 07:26:56,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:57,045 | INFO     | [data] control thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:57,385 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:57,403 | INFO     | [payload] control thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:57,414 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:57,574 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:57,809 | INFO     | [job] control thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:26:59,411 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:27:21] 2025-11-25 07:27:15,771 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:27:21] 2025-11-25 07:27:16,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678912628544)>', '<ExcThread(monitor, started 139678476908288)>']
[2025-11-25 02:27:21] 2025-11-25 07:27:16,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:27:21] 2025-11-25 07:27:16,509 | INFO     | [monitor] control thread has ended
[2025-11-25 02:27:21] 2025-11-25 07:27:21,260 | INFO     | all workflow threads have been joined
[2025-11-25 02:27:21] 2025-11-25 07:27:21,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:27:21] 2025-11-25 07:27:21,272 | INFO     | traces error code: 0
[2025-11-25 02:27:21] 2025-11-25 07:27:21,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:27:21] 2025-11-25 07:27:21,372 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:27:21] 2025-11-25 07:27:21,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:27:21] 2025-11-25 07:27:21,379 [wrapper] pilotpid: 12686
[2025-11-25 02:27:21] 2025-11-25 07:27:21,383 [wrapper] Pilot exit status: 0
[2025-11-25 02:27:21] 2025-11-25 07:27:21,399 [wrapper] pandaids: 6895375879
[2025-11-25 02:27:21] 2025-11-25 07:27:21,439 [wrapper] cleanup supervisor_pilot 23725 12687
[2025-11-25 02:27:21] 2025-11-25 07:27:21,443 [wrapper] Test setup, not cleaning
[2025-11-25 02:27:21] 2025-11-25 07:27:21,447 [wrapper] apfmon messages muted
[2025-11-25 02:27:21] 2025-11-25 07:27:21,451 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:27:21] 2025-11-25 07:27:21,455 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:27:21]  *** Error codes and diagnostics ***
[2025-11-25 02:27:21]     "exeErrorCode": 0,
[2025-11-25 02:27:21]     "exeErrorDiag": "",
[2025-11-25 02:27:21]     "pilotErrorCode": 0,
[2025-11-25 02:27:21]     "pilotErrorDiag": "",
[2025-11-25 02:27:21]  *** Listing of results directory ***
[2025-11-25 02:27:21] total 1304896
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 19:08 pilot3.tar.gz
[2025-11-25 02:27:21] -rwx------ 1 boincer umatlas     36292 Nov 23 19:14 runpilot2-wrapper.sh
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 19:14 queuedata.json
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas       100 Nov 24 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:27:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 19:21 run_atlas
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas       105 Nov 24 19:21 job.xml
[2025-11-25 02:27:21] -rw-r--r-- 2 boincer umatlas 411691676 Nov 24 19:21 EVNT.47483658._000958.pool.root.1
[2025-11-25 02:27:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 19:21 start_atlas.sh
[2025-11-25 02:27:21] drwxrwx--x 2 boincer umatlas      4096 Nov 24 19:21 shared
[2025-11-25 02:27:21] -rw-r--r-- 2 boincer umatlas    590105 Nov 24 19:21 input.tar.gz
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas         0 Nov 24 19:21 boinc_lockfile
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 19:21 pandaJob.out
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas        57 Nov 24 19:21 setup.sh.local
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas    991801 Nov 24 19:21 agis_schedconf.cvmfs.json
[2025-11-25 02:27:21] drwx------ 5 boincer umatlas      4096 Nov 24 19:21 pilot3
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas       533 Nov 25 02:19 boinc_task_state.xml
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 02:20 init_data.xml
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas 909098792 Nov 25 02:26 HITS.47556137._009450.pool.root.1
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas      1063 Nov 25 02:26 memory_monitor_summary.json
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas        95 Nov 25 02:26 pilot_heartbeat.json
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas   1516227 Nov 25 02:26 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas   2182149 Nov 25 02:26 log.47556137._009450.job.log.tgz.1
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas      8666 Nov 25 02:26 heartbeat.json
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas        29 Nov 25 02:27 wrapper_checkpoint.txt
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 02:27 boinc_mmap_file
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas      4738 Nov 25 02:27 pilotlog.txt
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas   3570697 Nov 25 02:27 log.47556137._009450.job.log.1
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas       353 Nov 25 02:27 output.list
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas       620 Nov 25 02:27 runtime_log
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas   5775360 Nov 25 02:27 result.tar.gz
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas      9340 Nov 25 02:27 runtime_log.err
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas       669 Nov 25 02:27 5stKDm4OZh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0qIKDmnJeZVm.diag
[2025-11-25 02:27:21] -rw-r--r-- 1 boincer umatlas     21236 Nov 25 02:27 stderr.txt
[2025-11-25 02:27:21] HITS file was successfully produced:
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas 909098792 Nov 25 02:26 shared/HITS.pool.root.1
[2025-11-25 02:27:21]  *** Contents of shared directory: ***
[2025-11-25 02:27:21] total 1296076
[2025-11-25 02:27:21] -rw-r--r-- 2 boincer umatlas 411691676 Nov 24 19:21 ATLAS.root_0
[2025-11-25 02:27:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 19:21 start_atlas.sh
[2025-11-25 02:27:21] -rw-r--r-- 2 boincer umatlas    590105 Nov 24 19:21 input.tar.gz
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas 909098792 Nov 25 02:26 HITS.pool.root.1
[2025-11-25 02:27:21] -rw------- 1 boincer umatlas   5775360 Nov 25 02:27 result.tar.gz
02:27:23 (9009): run_atlas exited; CPU time 287052.525956
02:27:23 (9009): called boinc_finish(0)

</stderr_txt>
]]>

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