Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:16:01 (3059275): wrapper (7.7.26015): starting
00:16:01 (3059275): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:16:01] Arguments: --nthreads 9
[2025-11-25 00:16:01] Threads: 9
[2025-11-25 00:16:01] Checking for CVMFS
[2025-11-25 00:16:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:16:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:16:04] 2.13.3.0 11322 28177 233852 153271 0 84 27140145 32935937 22518 16776704 0 44165584 99.591 44278414 38444 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:16:04] CVMFS is ok
[2025-11-25 00:16:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:16:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:16:04] Further information can be found at the LHC@home message board.
[2025-11-25 00:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:16:04] Checking for apptainer binary...
[2025-11-25 00:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:16:04] Running /usr/bin/apptainer --version
[2025-11-25 00:16:04] apptainer version 1.4.4-1.el9
[2025-11-25 00:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:16:04] c6-1-26-4.aglt2.org
[2025-11-25 00:16:04] apptainer works
[2025-11-25 00:16:04] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:16:04] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:16:04] Starting ATLAS job with PandaID=6895377350
[2025-11-25 00:16:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:11 (3059275): BOINC client no longer exists - exiting
00:20:11 (3059275): timer handler: client dead, exiting
00:27:29 (3144757): wrapper (7.7.26015): starting
00:27:29 (3144757): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:27:29] Arguments: --nthreads 9
[2025-11-25 00:27:29] Threads: 9
[2025-11-25 00:27:29] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:27:29] Checking for CVMFS
[2025-11-25 00:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:27:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:27:30] 2.13.3.0 11322 28189 237032 153272 1 283 27175704 32935937 17546 16776704 0 44361964 99.593 44279719 38443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:27:30] CVMFS is ok
[2025-11-25 00:27:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:27:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:27:30] Further information can be found at the LHC@home message board.
[2025-11-25 00:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:27:30] Checking for apptainer binary...
[2025-11-25 00:27:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:27:30] Running /usr/bin/apptainer --version
[2025-11-25 00:27:30] apptainer version 1.4.4-1.el9
[2025-11-25 00:27:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:27:30] c6-1-26-4.aglt2.org
[2025-11-25 00:27:30] apptainer works
[2025-11-25 00:27:30] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:27:30] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:27:30] Starting ATLAS job with PandaID=6895377350
[2025-11-25 00:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:00:22 (2100233): wrapper (7.7.26015): starting
16:00:22 (2100233): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 16:00:22] Arguments: --nthreads 9
[2025-11-25 16:00:22] Threads: 9
[2025-11-25 16:00:22] This job has been restarted, cleaning up previous attempt
[2025-11-25 16:00:22] Checking for CVMFS
[2025-11-25 16:00:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:00:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:00:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:00:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:00:22] 2.13.3.0 11322 29122 231148 153297 2 101 24392331 32935936 20462 16776704 0 48145505 99.601 47433492 38381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 16:00:22] CVMFS is ok
[2025-11-25 16:00:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:00:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:00:22] Further information can be found at the LHC@home message board.
[2025-11-25 16:00:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:00:22] Checking for apptainer binary...
[2025-11-25 16:00:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 16:00:22] Running /usr/bin/apptainer --version
[2025-11-25 16:00:22] apptainer version 1.4.4-1.el9
[2025-11-25 16:00:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:00:22] c6-1-26-4.aglt2.org
[2025-11-25 16:00:22] apptainer works
[2025-11-25 16:00:22] Set ATHENA_PROC_NUMBER=9
[2025-11-25 16:00:22] Set ATHENA_CORE_NUMBER=9
[2025-11-25 16:00:22] Starting ATLAS job with PandaID=6895377350
[2025-11-25 16:00:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:48:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:48:27] 2025-11-26 13:47:42,493 | INFO     | intersect: -12518124788.682901
[2025-11-26 08:48:27] 2025-11-26 13:47:42,494 | INFO     | chi2: 6.745267807454338
[2025-11-26 08:48:27] 2025-11-26 13:47:42,503 | INFO     | sum of square deviations: 296344303575.9738
[2025-11-26 08:48:27] 2025-11-26 13:47:42,561 | INFO     | sum of deviations: 2468353919299.5347
[2025-11-26 08:48:27] 2025-11-26 13:47:42,561 | INFO     | mean x: 1764134472.2832487
[2025-11-26 08:48:27] 2025-11-26 13:47:42,562 | INFO     | mean y: 3091616.6324873096
[2025-11-26 08:48:27] 2025-11-26 13:47:42,562 | INFO     | intersect: -14690992886.71754
[2025-11-26 08:48:27] 2025-11-26 13:47:42,563 | INFO     | chi2: 3.8473913199986245
[2025-11-26 08:48:27] 2025-11-26 13:47:42,563 | INFO     | current chi2=3.8473913199986245 (change=42.9616224318508 %)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,564 | INFO     | sum of square deviations: 291855040700.3639
[2025-11-26 08:48:27] 2025-11-26 13:47:42,581 | INFO     | sum of deviations: 2666981108520.4893
[2025-11-26 08:48:27] 2025-11-26 13:47:42,581 | INFO     | mean x: 1764134319.7938776
[2025-11-26 08:48:27] 2025-11-26 13:47:42,581 | INFO     | mean y: 3098363.5469387756
[2025-11-26 08:48:27] 2025-11-26 13:47:42,581 | INFO     | intersect: -16117619964.608526
[2025-11-26 08:48:27] 2025-11-26 13:47:42,582 | INFO     | chi2: 2.7100106297982998
[2025-11-26 08:48:27] 2025-11-26 13:47:42,582 | INFO     | current chi2=2.7100106297982998 (change=29.562386448403473 %)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,583 | INFO     | sum of square deviations: 287411180619.3478
[2025-11-26 08:48:27] 2025-11-26 13:47:42,600 | INFO     | sum of deviations: 2811769963252.7134
[2025-11-26 08:48:27] 2025-11-26 13:47:42,600 | INFO     | mean x: 1764134167.3015385
[2025-11-26 08:48:27] 2025-11-26 13:47:42,600 | INFO     | mean y: 3103327.9907692308
[2025-11-26 08:48:27] 2025-11-26 13:47:42,600 | INFO     | intersect: -17255583171.529446
[2025-11-26 08:48:27] 2025-11-26 13:47:42,601 | INFO     | chi2: 1.9891933234338461
[2025-11-26 08:48:27] 2025-11-26 13:47:42,601 | INFO     | current chi2=1.9891933234338461 (change=26.598320258917308 %)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,602 | INFO     | sum of square deviations: 283012432092.17444
[2025-11-26 08:48:27] 2025-11-26 13:47:42,619 | INFO     | sum of deviations: 2778938347058.11
[2025-11-26 08:48:27] 2025-11-26 13:47:42,619 | INFO     | mean x: 1764134014.8051546
[2025-11-26 08:48:27] 2025-11-26 13:47:42,620 | INFO     | mean y: 3102189.7783505153
[2025-11-26 08:48:27] 2025-11-26 13:47:42,620 | INFO     | intersect: -17319174527.3623
[2025-11-26 08:48:27] 2025-11-26 13:47:42,621 | INFO     | chi2: 1.987488171685507
[2025-11-26 08:48:27] 2025-11-26 13:47:42,621 | INFO     | current chi2=1.987488171685507 (change=0.08572076571197987 %)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,621 | INFO     | right removable region: 969
[2025-11-26 08:48:27] 2025-11-26 13:47:42,622 | INFO     | sum of square deviations: 296342991835.5392
[2025-11-26 08:48:27] 2025-11-26 13:47:42,639 | INFO     | sum of deviations: 1881929863128.65
[2025-11-26 08:48:27] 2025-11-26 13:47:42,639 | INFO     | mean x: 1764134777.2822335
[2025-11-26 08:48:27] 2025-11-26 13:47:42,639 | INFO     | mean y: 3088942.105583756
[2025-11-26 08:48:27] 2025-11-26 13:47:42,639 | INFO     | intersect: -11200070948.355825
[2025-11-26 08:48:27] 2025-11-26 13:47:42,641 | INFO     | chi2: 4.950628590865684
[2025-11-26 08:48:27] 2025-11-26 13:47:42,641 | INFO     | current chi2=4.950628590865684 (change=26.605900133503376 %)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,642 | INFO     | sum of square deviations: 291852837828.42694
[2025-11-26 08:48:27] 2025-11-26 13:47:42,659 | INFO     | sum of deviations: 1802377626606.9294
[2025-11-26 08:48:27] 2025-11-26 13:47:42,659 | INFO     | mean x: 1764134929.7867346
[2025-11-26 08:48:27] 2025-11-26 13:47:42,659 | INFO     | mean y: 3091643.2867346937
[2025-11-26 08:48:27] 2025-11-26 13:47:42,659 | INFO     | intersect: -10891567978.39776
[2025-11-26 08:48:27] 2025-11-26 13:47:42,660 | INFO     | chi2: 4.891005577493983
[2025-11-26 08:48:27] 2025-11-26 13:47:42,661 | INFO     | current chi2=4.891005577493983 (change=1.2043523822754676 %)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,661 | INFO     | left removable region: 20
[2025-11-26 08:48:27] 2025-11-26 13:47:42,662 | INFO     | sum of square deviations: 265025370923.4245
[2025-11-26 08:48:27] 2025-11-26 13:47:42,677 | INFO     | sum of deviations: 2320257172361.8364
[2025-11-26 08:48:27] 2025-11-26 13:47:42,678 | INFO     | mean x: 1764134594.328767
[2025-11-26 08:48:27] 2025-11-26 13:47:42,678 | INFO     | mean y: 3117958.962065332
[2025-11-26 08:48:27] 2025-11-26 13:47:42,678 | INFO     | intersect: -15441614487.750172
[2025-11-26 08:48:27] 2025-11-26 13:47:42,679 | INFO     | chi2: 0.09200890702313703
[2025-11-26 08:48:27] 2025-11-26 13:47:42,679 | INFO     | current memory leak: 8.75 B/s (using 949 data points, chi2=0.09)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,681 | INFO     | could have reported an average CPU frequency of 3006 MHz (36 samples)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,681 | INFO     | ..............................
[2025-11-26 08:48:27] 2025-11-26 13:47:42,681 | INFO     | . Timing measurements:
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . get job = 0 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . initial setup = 0 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . payload setup = 5 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . stage-in = 0 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . payload execution = 60392 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . stage-out = 3 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | . log creation = 0 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,682 | INFO     | ..............................
[2025-11-26 08:48:27] 2025-11-26 13:47:42,778 | INFO     | 
[2025-11-26 08:48:27] 2025-11-26 13:47:42,778 | INFO     | job summary report
[2025-11-26 08:48:27] 2025-11-26 13:47:42,778 | INFO     | --------------------------------------------------
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | PanDA job id: 6895377350
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | task id: 47556149
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | errors: (none)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | pilot state: finished 
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | transexitcode: 0
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | exeerrorcode: 0
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | exeerrordiag: 
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | exitcode: 0
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | exitmsg: OK
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | cpuconsumptiontime: 232297 s
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | nevents: 1000
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | neventsw: 0
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | pid: 2150520
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | pgrp: 2150520
[2025-11-26 08:48:27] 2025-11-26 13:47:42,779 | INFO     | corecount: 9
[2025-11-26 08:48:27] 2025-11-26 13:47:42,780 | INFO     | event service: False
[2025-11-26 08:48:27] 2025-11-26 13:47:42,780 | INFO     | sizes: {0: 2284315, 1: 2284315, 4: 2284605, 11: 2284633, 60401: 2337247, 60406: 2346425, 60415: 2346615}
[2025-11-26 08:48:27] 2025-11-26 13:47:42,780 | INFO     | --------------------------------------------------
[2025-11-26 08:48:27] 2025-11-26 13:47:42,780 | INFO     | 
[2025-11-26 08:48:27] 2025-11-26 13:47:42,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 08:48:27] 2025-11-26 13:47:42,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | job 6895377350 has completed (purged errors)
[2025-11-26 08:48:27] 2025-11-26 13:47:42,804 | INFO     | overall cleanup function is called
[2025-11-26 08:48:27] 2025-11-26 13:47:43,823 | INFO     | --- collectZombieJob: --- 10, [2150520]
[2025-11-26 08:48:27] 2025-11-26 13:47:43,824 | INFO     | zombie collector waiting for pid 2150520
[2025-11-26 08:48:27] 2025-11-26 13:47:43,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:48:27] 2025-11-26 13:47:43,824 | INFO     | collected zombie processes
[2025-11-26 08:48:27] 2025-11-26 13:47:43,824 | INFO     | will attempt to kill all subprocesses of pid=2150520
[2025-11-26 08:48:27] 2025-11-26 13:47:44,235 | INFO     | process IDs to be killed: [2150520] (in reverse order)
[2025-11-26 08:48:27] 2025-11-26 13:47:44,410 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:48:27] 2025-11-26 13:47:44,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:48:27] 2025-11-26 13:47:44,434 | INFO     | did not find any defunct processes belonging to 2150520
[2025-11-26 08:48:27] 2025-11-26 13:47:44,448 | INFO     | did not find any defunct processes belonging to 2150520
[2025-11-26 08:48:27] 2025-11-26 13:47:44,451 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:48:27] 2025-11-26 13:47:44,451 | INFO     | ready for new job
[2025-11-26 08:48:27] 2025-11-26 13:47:44,451 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:48:27] 2025-11-26 13:47:44,457 | INFO     | ***************************************
[2025-11-26 08:48:27] 2025-11-26 13:47:44,457 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:48:27] 2025-11-26 13:47:44,457 | INFO     | ***************************************
[2025-11-26 08:48:27] 2025-11-26 13:47:44,457 | INFO     | 
[2025-11-26 08:48:27] 2025-11-26 13:47:44,460 | INFO     | architecture information:
[2025-11-26 08:48:27] 2025-11-26 13:47:44,461 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:48:27] 2025-11-26 13:47:44,489 | INFO     | cat /etc/os-release:
[2025-11-26 08:48:27] NAME="CentOS Linux"
[2025-11-26 08:48:27] VERSION="7 (Core)"
[2025-11-26 08:48:27] ID="centos"
[2025-11-26 08:48:27] ID_LIKE="rhel fedora"
[2025-11-26 08:48:27] VERSION_ID="7"
[2025-11-26 08:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:48:27] ANSI_COLOR="0;31"
[2025-11-26 08:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:48:27] HOME_URL="https://www.centos.org/"
[2025-11-26 08:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:48:27] 
[2025-11-26 08:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:48:27] 
[2025-11-26 08:48:27] 2025-11-26 13:47:44,489 | INFO     | ***************************************
[2025-11-26 08:48:27] 2025-11-26 13:47:44,993 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 08:48:27] 2025-11-26 13:47:45,021 | INFO     | sufficient remaining disk space (66092793856 B)
[2025-11-26 08:48:27] 2025-11-26 13:47:45,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:48:27] 2025-11-26 13:47:45,022 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:48:27] 2025-11-26 13:47:45,022 | INFO     | update_server=False
[2025-11-26 08:48:27] 2025-11-26 13:47:45,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:48:27] 2025-11-26 13:47:45,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:48:27] 2025-11-26 13:47:45,022 | INFO     | aborting loop
[2025-11-26 08:48:27] 2025-11-26 13:47:45,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:48:27] 2025-11-26 13:47:45,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:48:27] 2025-11-26 13:47:45,028 | INFO     | all data control threads have been joined
[2025-11-26 08:48:27] 2025-11-26 13:47:46,028 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,031 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,058 | INFO     | [data] control thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,212 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,318 | INFO     | all job control threads have been joined
[2025-11-26 08:48:27] 2025-11-26 13:47:46,484 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,512 | INFO     | all payload control threads have been joined
[2025-11-26 08:48:27] 2025-11-26 13:47:46,516 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,522 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:46,624 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,032 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,324 | INFO     | [job] control thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,409 | INFO     | [job] validate thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,451 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,517 | INFO     | [payload] control thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:47,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:48:27] 2025-11-26 13:47:48,799 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:47:49,037 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:48:27] 2025-11-26 13:48:14,938 | INFO     | PID=2118898 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:48:27] 2025-11-26 13:48:14,938 | INFO     | .. there are 34 such processes running
[2025-11-26 08:48:27] 2025-11-26 13:48:14,938 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:48:27] 2025-11-26 13:48:14,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:48:27] 2025-11-26 13:48:14,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:48:27] 2025-11-26 13:48:20,454 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:48:27] 2025-11-26 13:48:21,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064662337344)>', '<ExcThread(monitor, started 140064042510080)>']
[2025-11-26 08:48:27] 2025-11-26 13:48:21,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:48:27] 2025-11-26 13:48:21,980 | INFO     | [monitor] control thread has ended
[2025-11-26 08:48:27] 2025-11-26 13:48:26,999 | INFO     | all workflow threads have been joined
[2025-11-26 08:48:27] 2025-11-26 13:48:26,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:48:27] 2025-11-26 13:48:27,000 | INFO     | traces error code: 0
[2025-11-26 08:48:27] 2025-11-26 13:48:27,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:48:27] 2025-11-26 13:48:27,644 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:48:27] 2025-11-26 13:48:27,651 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:48:27] 2025-11-26 13:48:27,655 [wrapper] pilotpid: 2118898
[2025-11-26 08:48:27] 2025-11-26 13:48:27,658 [wrapper] Pilot exit status: 0
[2025-11-26 08:48:27] 2025-11-26 13:48:27,677 [wrapper] pandaids: 6895377350 6895377350 6895377350
[2025-11-26 08:48:27] 2025-11-26 13:48:27,789 [wrapper] cleanup supervisor_pilot 1229520 2118900
[2025-11-26 08:48:27] 2025-11-26 13:48:27,802 [wrapper] Test setup, not cleaning
[2025-11-26 08:48:27] 2025-11-26 13:48:27,806 [wrapper] apfmon messages muted
[2025-11-26 08:48:27] 2025-11-26 13:48:27,809 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:48:27] 2025-11-26 13:48:27,812 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:48:27]  *** Error codes and diagnostics ***
[2025-11-26 08:48:27]     "exeErrorCode": 0,
[2025-11-26 08:48:27]     "exeErrorDiag": "",
[2025-11-26 08:48:27]     "pilotErrorCode": 0,
[2025-11-26 08:48:27]     "pilotErrorDiag": "",
[2025-11-26 08:48:27]  *** Listing of results directory ***
[2025-11-26 08:48:27] total 1721004
[2025-11-26 08:48:27] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 19:34 pilot3.tar.gz
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 19:49 queuedata.json
[2025-11-26 08:48:27] -rwx------. 1 boincer umatlas     36292 Nov 23 19:50 runpilot2-wrapper.sh
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:48:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:15 run_atlas
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:15 job.xml
[2025-11-26 08:48:27] -rw-r--r--. 3 boincer umatlas 410128345 Nov 25 00:16 EVNT.47483658._001208.pool.root.1
[2025-11-26 08:48:27] -rw-r--r--. 3 boincer umatlas 410128345 Nov 25 00:16 ATLAS.root_0
[2025-11-26 08:48:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:16 start_atlas.sh
[2025-11-26 08:48:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:16 shared
[2025-11-26 08:48:27] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 00:16 input.tar.gz
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:16 boinc_lockfile
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 16:00 pandaJob.out
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas        57 Nov 25 16:00 setup.sh.local
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas    991893 Nov 25 16:00 agis_schedconf.cvmfs.json
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:31 boinc_task_state.xml
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas 918335042 Nov 26 08:46 HITS.47556149._001948.pool.root.1
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas      1068 Nov 26 08:47 memory_monitor_summary.json
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas      6846 Nov 26 08:47 init_data.xml
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas   2240495 Nov 26 08:47 log.47556149._001948.job.log.tgz.1
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas        96 Nov 26 08:47 pilot_heartbeat.json
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas      8640 Nov 26 08:47 heartbeat.json
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas      4824 Nov 26 08:48 pilotlog.txt
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:48 boinc_mmap_file
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:48 wrapper_checkpoint.txt
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas   7656067 Nov 26 08:48 log.47556149._001948.job.log.1
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas       353 Nov 26 08:48 output.list
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:48 runtime_log
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas   9912320 Nov 26 08:48 result.tar.gz
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas      9433 Nov 26 08:48 runtime_log.err
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas       915 Nov 26 08:48 NWKMDmnxZh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkrIKDmM2g3In.diag
[2025-11-26 08:48:27] -rw-r--r--. 1 boincer umatlas     25570 Nov 26 08:48 stderr.txt
[2025-11-26 08:48:27] HITS file was successfully produced:
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas 918335042 Nov 26 08:46 shared/HITS.pool.root.1
[2025-11-26 08:48:27]  *** Contents of shared directory: ***
[2025-11-26 08:48:27] total 1307612
[2025-11-26 08:48:27] -rw-r--r--. 3 boincer umatlas 410128345 Nov 25 00:16 ATLAS.root_0
[2025-11-26 08:48:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:16 start_atlas.sh
[2025-11-26 08:48:27] -rw-r--r--. 2 boincer umatlas    590109 Nov 25 00:16 input.tar.gz
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas 918335042 Nov 26 08:46 HITS.pool.root.1
[2025-11-26 08:48:27] -rw-------. 1 boincer umatlas   9912320 Nov 26 08:48 result.tar.gz
08:48:29 (2100233): run_atlas exited; CPU time 233777.977202
08:48:29 (2100233): called boinc_finish(0)

</stderr_txt>
]]>

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