Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:51:40 (32399): wrapper (7.7.26015): starting
18:51:40 (32399): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 18:51:40] Arguments: --nthreads 8
[2025-11-24 18:51:40] Threads: 8
[2025-11-24 18:51:40] Checking for CVMFS
[2025-11-24 18:51:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:51:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:51:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:51:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:51:40] 2.11.2.0 14729 115471 145236 153263 3 81 16961236 18432000 1885 130560 0 83454390 99.974 4799733 29310 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 18:51:40] CVMFS is ok
[2025-11-24 18:51:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:51:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:51:40] Further information can be found at the LHC@home message board.
[2025-11-24 18:51:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:51:40] Checking for apptainer binary...
[2025-11-24 18:51:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:51:40] Running /usr/bin/apptainer --version
[2025-11-24 18:51:40] apptainer version 1.3.2-1.el7
[2025-11-24 18:51:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:51:41] c-206-30.aglt2.org
[2025-11-24 18:51:41] apptainer works
[2025-11-24 18:51:41] Set ATHENA_PROC_NUMBER=8
[2025-11-24 18:51:41] Set ATHENA_CORE_NUMBER=8
[2025-11-24 18:51:41] Starting ATLAS job with PandaID=6895376941
[2025-11-24 18:51:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:17:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:17:56] 2025-11-25 19:16:52,268 | INFO     | monitor loop #4981: job 0:6895376941 is in state 'finished'
[2025-11-25 14:17:56] 2025-11-25 19:16:52,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,680 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 14:17:56] 2025-11-25 19:16:52,684 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2488.9583333333335
[2025-11-25 14:17:56] 2025-11-25 19:16:52,688 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895376941/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,689 | INFO     | extracted standard info from prmon json
[2025-11-25 14:17:56] 2025-11-25 19:16:52,689 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:17:56] 2025-11-25 19:16:52,690 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:17:56] 2025-11-25 19:16:52,708 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:17:56] 2025-11-25 19:16:52,709 | INFO     | sum of square deviations: 466693682534.63275
[2025-11-25 14:17:56] 2025-11-25 19:16:52,733 | INFO     | sum of deviations: 2070723653646.0107
[2025-11-25 14:17:56] 2025-11-25 19:16:52,733 | INFO     | mean x: 1764063262.0951135
[2025-11-25 14:17:56] 2025-11-25 19:16:52,733 | INFO     | mean y: 2876294.0366492146
[2025-11-25 14:17:56] 2025-11-25 19:16:52,734 | INFO     | intersect: -7824286703.990901
[2025-11-25 14:17:56] 2025-11-25 19:16:52,735 | INFO     | chi2: 6.092407547022435
[2025-11-25 14:17:56] 2025-11-25 19:16:52,736 | INFO     | sum of square deviations: 460611943950.35425
[2025-11-25 14:17:56] 2025-11-25 19:16:52,754 | INFO     | time since job start (69899s) is within the limit (172800.0s)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,775 | INFO     | sum of deviations: 2433833846586.3486
[2025-11-25 14:17:56] 2025-11-25 19:16:52,776 | INFO     | mean x: 1764063109.5977213
[2025-11-25 14:17:56] 2025-11-25 19:16:52,776 | INFO     | mean y: 2885395.1314636283
[2025-11-25 14:17:56] 2025-11-25 19:16:52,776 | INFO     | intersect: -9318272165.029533
[2025-11-25 14:17:56] 2025-11-25 19:16:52,778 | INFO     | chi2: 3.1650915025367836
[2025-11-25 14:17:56] 2025-11-25 19:16:52,778 | INFO     | current chi2=3.1650915025367836 (change=48.04859198751944 %)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,779 | INFO     | sum of square deviations: 454583276128.5604
[2025-11-25 14:17:56] 2025-11-25 19:16:52,821 | INFO     | sum of deviations: 2582418550315.238
[2025-11-25 14:17:56] 2025-11-25 19:16:52,822 | INFO     | mean x: 1764062957.100352
[2025-11-25 14:17:56] 2025-11-25 19:16:52,822 | INFO     | mean y: 2889151.664612676
[2025-11-25 14:17:56] 2025-11-25 19:16:52,822 | INFO     | intersect: -10018484584.600052
[2025-11-25 14:17:56] 2025-11-25 19:16:52,824 | INFO     | chi2: 2.5677737513791032
[2025-11-25 14:17:56] 2025-11-25 19:16:52,824 | INFO     | current chi2=2.5677737513791032 (change=18.872053167465687 %)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,824 | INFO     | right removable region: 1135
[2025-11-25 14:17:56] 2025-11-25 19:16:52,826 | INFO     | sum of square deviations: 460611527930.35406
[2025-11-25 14:17:56] 2025-11-25 19:16:52,857 | INFO     | sum of deviations: 1772502166732.6409
[2025-11-25 14:17:56] 2025-11-25 19:16:52,858 | INFO     | mean x: 1764063414.5977213
[2025-11-25 14:17:56] 2025-11-25 19:16:52,858 | INFO     | mean y: 2883763.0166520597
[2025-11-25 14:17:56] 2025-11-25 19:16:52,858 | INFO     | intersect: -6785496542.3521385
[2025-11-25 14:17:56] 2025-11-25 19:16:52,859 | INFO     | chi2: 4.046980399390364
[2025-11-25 14:17:56] 2025-11-25 19:16:52,859 | INFO     | current chi2=4.046980399390364 (change=33.57338017598216 %)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,860 | INFO     | sum of square deviations: 454582583290.95776
[2025-11-25 14:17:56] 2025-11-25 19:16:52,890 | INFO     | sum of deviations: 1696907111931.0437
[2025-11-25 14:17:56] 2025-11-25 19:16:52,890 | INFO     | mean x: 1764063567.0985916
[2025-11-25 14:17:56] 2025-11-25 19:16:52,891 | INFO     | mean y: 2885674.9014084507
[2025-11-25 14:17:56] 2025-11-25 19:16:52,891 | INFO     | intersect: -6582170864.741846
[2025-11-25 14:17:56] 2025-11-25 19:16:52,892 | INFO     | chi2: 3.993271341032019
[2025-11-25 14:17:56] 2025-11-25 19:16:52,892 | INFO     | current chi2=3.993271341032019 (change=1.327139077976151 %)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,892 | INFO     | left removable region: 20
[2025-11-25 14:17:56] 2025-11-25 19:16:52,893 | INFO     | sum of square deviations: 429835973598.3671
[2025-11-25 14:17:56] 2025-11-25 19:16:52,914 | INFO     | sum of deviations: 2129529847810.7966
[2025-11-25 14:17:56] 2025-11-25 19:16:52,915 | INFO     | mean x: 1764063536.6053813
[2025-11-25 14:17:56] 2025-11-25 19:16:52,915 | INFO     | mean y: 2901850.333632287
[2025-11-25 14:17:56] 2025-11-25 19:16:52,915 | INFO     | intersect: -8736771386.383345
[2025-11-25 14:17:56] 2025-11-25 19:16:52,916 | INFO     | chi2: 0.3704736462773079
[2025-11-25 14:17:56] 2025-11-25 19:16:52,916 | INFO     | current memory leak: 4.95 B/s (using 1115 data points, chi2=0.37)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,917 | INFO     | could have reported an average CPU frequency of 2632 MHz (41 samples)
[2025-11-25 14:17:56] 2025-11-25 19:16:52,917 | INFO     | ..............................
[2025-11-25 14:17:56] 2025-11-25 19:16:52,917 | INFO     | . Timing measurements:
[2025-11-25 14:17:56] 2025-11-25 19:16:52,917 | INFO     | . get job = 0 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,917 | INFO     | . initial setup = 2 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,918 | INFO     | . payload setup = 5 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,918 | INFO     | . stage-in = 0 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,918 | INFO     | . payload execution = 69865 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,918 | INFO     | . stage-out = 3 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,918 | INFO     | . log creation = 0 s
[2025-11-25 14:17:56] 2025-11-25 19:16:52,918 | INFO     | ..............................
[2025-11-25 14:17:56] 2025-11-25 19:16:52,994 | INFO     | 
[2025-11-25 14:17:56] 2025-11-25 19:16:52,999 | INFO     | job summary report
[2025-11-25 14:17:56] 2025-11-25 19:16:52,999 | INFO     | --------------------------------------------------
[2025-11-25 14:17:56] 2025-11-25 19:16:53,000 | INFO     | PanDA job id: 6895376941
[2025-11-25 14:17:56] 2025-11-25 19:16:53,000 | INFO     | task id: 47556149
[2025-11-25 14:17:56] 2025-11-25 19:16:53,000 | INFO     | errors: (none)
[2025-11-25 14:17:56] 2025-11-25 19:16:53,000 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:17:56] 2025-11-25 19:16:53,000 | INFO     | pilot state: finished 
[2025-11-25 14:17:56] 2025-11-25 19:16:53,000 | INFO     | transexitcode: 0
[2025-11-25 14:17:56] 2025-11-25 19:16:53,001 | INFO     | exeerrorcode: 0
[2025-11-25 14:17:56] 2025-11-25 19:16:53,001 | INFO     | exeerrordiag: 
[2025-11-25 14:17:56] 2025-11-25 19:16:53,001 | INFO     | exitcode: 0
[2025-11-25 14:17:56] 2025-11-25 19:16:53,001 | INFO     | exitmsg: OK
[2025-11-25 14:17:56] 2025-11-25 19:16:53,001 | INFO     | cpuconsumptiontime: 542856 s
[2025-11-25 14:17:56] 2025-11-25 19:16:53,001 | INFO     | nevents: 1000
[2025-11-25 14:17:56] 2025-11-25 19:16:53,002 | INFO     | neventsw: 0
[2025-11-25 14:17:56] 2025-11-25 19:16:53,002 | INFO     | pid: 10241
[2025-11-25 14:17:56] 2025-11-25 19:16:53,002 | INFO     | pgrp: 10241
[2025-11-25 14:17:56] 2025-11-25 19:16:53,002 | INFO     | corecount: 8
[2025-11-25 14:17:56] 2025-11-25 19:16:53,002 | INFO     | event service: False
[2025-11-25 14:17:56] 2025-11-25 19:16:53,002 | INFO     | sizes: {0: 2284310, 4: 2284572, 11: 2284600, 69875: 2340942, 69879: 2349997, 69885: 2350283}
[2025-11-25 14:17:56] 2025-11-25 19:16:53,003 | INFO     | --------------------------------------------------
[2025-11-25 14:17:56] 2025-11-25 19:16:53,003 | INFO     | 
[2025-11-25 14:17:56] 2025-11-25 19:16:53,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 14:17:56] 2025-11-25 19:16:53,042 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:17:56] 2025-11-25 19:16:53,046 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,046 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:17:56] 2025-11-25 19:16:53,046 | INFO     | job 6895376941 has completed (purged errors)
[2025-11-25 14:17:56] 2025-11-25 19:16:53,046 | INFO     | overall cleanup function is called
[2025-11-25 14:17:56] 2025-11-25 19:16:54,060 | INFO     | --- collectZombieJob: --- 10, [10241]
[2025-11-25 14:17:56] 2025-11-25 19:16:54,061 | INFO     | zombie collector waiting for pid 10241
[2025-11-25 14:17:56] 2025-11-25 19:16:54,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:17:56] 2025-11-25 19:16:54,061 | INFO     | collected zombie processes
[2025-11-25 14:17:56] 2025-11-25 19:16:54,061 | INFO     | will attempt to kill all subprocesses of pid=10241
[2025-11-25 14:17:56] 2025-11-25 19:16:54,208 | INFO     | process IDs to be killed: [10241] (in reverse order)
[2025-11-25 14:17:56] 2025-11-25 19:16:54,253 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:17:56] 2025-11-25 19:16:54,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:17:56] 2025-11-25 19:16:54,256 | INFO     | did not find any defunct processes belonging to 10241
[2025-11-25 14:17:56] 2025-11-25 19:16:54,259 | INFO     | did not find any defunct processes belonging to 10241
[2025-11-25 14:17:56] 2025-11-25 19:16:54,260 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:17:56] 2025-11-25 19:16:54,260 | INFO     | ready for new job
[2025-11-25 14:17:56] 2025-11-25 19:16:54,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:17:56] 2025-11-25 19:16:54,264 | INFO     | ***************************************
[2025-11-25 14:17:56] 2025-11-25 19:16:54,264 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:17:56] 2025-11-25 19:16:54,264 | INFO     | ***************************************
[2025-11-25 14:17:56] 2025-11-25 19:16:54,265 | INFO     | 
[2025-11-25 14:17:56] 2025-11-25 19:16:54,265 | INFO     | architecture information:
[2025-11-25 14:17:56] 2025-11-25 19:16:54,266 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:17:56] 2025-11-25 19:16:54,276 | INFO     | cat /etc/os-release:
[2025-11-25 14:17:56] NAME="CentOS Linux"
[2025-11-25 14:17:56] VERSION="7 (Core)"
[2025-11-25 14:17:56] ID="centos"
[2025-11-25 14:17:56] ID_LIKE="rhel fedora"
[2025-11-25 14:17:56] VERSION_ID="7"
[2025-11-25 14:17:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:17:56] ANSI_COLOR="0;31"
[2025-11-25 14:17:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:17:56] HOME_URL="https://www.centos.org/"
[2025-11-25 14:17:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:17:56] 
[2025-11-25 14:17:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:17:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:17:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:17:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:17:56] 
[2025-11-25 14:17:56] 2025-11-25 19:16:54,276 | INFO     | ***************************************
[2025-11-25 14:17:56] 2025-11-25 19:16:54,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 14:17:56] 2025-11-25 19:16:54,830 | INFO     | sufficient remaining disk space (24945623040 B)
[2025-11-25 14:17:56] 2025-11-25 19:16:54,831 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:17:56] 2025-11-25 19:16:54,831 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:17:56] 2025-11-25 19:16:54,831 | INFO     | update_server=False
[2025-11-25 14:17:56] 2025-11-25 19:16:54,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:17:56] 2025-11-25 19:16:54,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:17:56] 2025-11-25 19:16:54,834 | INFO     | all data control threads have been joined
[2025-11-25 14:17:56] 2025-11-25 19:16:54,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:17:56] 2025-11-25 19:16:55,539 | INFO     | all job control threads have been joined
[2025-11-25 14:17:56] 2025-11-25 19:16:55,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:17:56] 2025-11-25 19:16:55,778 | INFO     | aborting loop
[2025-11-25 14:17:56] 2025-11-25 19:16:55,837 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:55,837 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:55,841 | INFO     | [data] control thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:56,010 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:56,119 | INFO     | all payload control threads have been joined
[2025-11-25 14:17:56] 2025-11-25 19:16:56,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:56,545 | INFO     | [job] control thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:56,607 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:56,783 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:56,844 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,023 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,050 | INFO     | [job] validate thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,122 | INFO     | [payload] control thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,174 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,187 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:16:57,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:17:56] 2025-11-25 19:17:01,500 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:17:56] 2025-11-25 19:17:25,959 | INFO     | PID=3759 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 14:17:56] 2025-11-25 19:17:25,959 | INFO     | .. there are 3 such processes running
[2025-11-25 14:17:56] 2025-11-25 19:17:25,960 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:17:56] 2025-11-25 19:17:25,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:17:56] 2025-11-25 19:17:25,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:17:56] 2025-11-25 19:17:49,421 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:17:56] 2025-11-25 19:17:51,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219385988928)>', '<ExcThread(monitor, started 140218720048896)>']
[2025-11-25 14:17:56] 2025-11-25 19:17:52,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:17:56] 2025-11-25 19:17:52,096 | INFO     | [monitor] control thread has ended
[2025-11-25 14:17:56] 2025-11-25 19:17:56,238 | INFO     | all workflow threads have been joined
[2025-11-25 14:17:56] 2025-11-25 19:17:56,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:17:56] 2025-11-25 19:17:56,239 | INFO     | traces error code: 0
[2025-11-25 14:17:56] 2025-11-25 19:17:56,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:17:56] 2025-11-25 19:17:56,336 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:17:56] 2025-11-25 19:17:56,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:17:56] 2025-11-25 19:17:56,340 [wrapper] pilotpid: 3759
[2025-11-25 14:17:56] 2025-11-25 19:17:56,342 [wrapper] Pilot exit status: 0
[2025-11-25 14:17:56] 2025-11-25 19:17:56,350 [wrapper] pandaids: 6895376941
[2025-11-25 14:17:56] 2025-11-25 19:17:56,389 [wrapper] cleanup supervisor_pilot 17853 3760
[2025-11-25 14:17:56] 2025-11-25 19:17:56,391 [wrapper] Test setup, not cleaning
[2025-11-25 14:17:56] 2025-11-25 19:17:56,393 [wrapper] apfmon messages muted
[2025-11-25 14:17:56] 2025-11-25 19:17:56,395 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:17:56] 2025-11-25 19:17:56,397 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:17:56]  *** Error codes and diagnostics ***
[2025-11-25 14:17:56]     "exeErrorCode": 0,
[2025-11-25 14:17:56]     "exeErrorDiag": "",
[2025-11-25 14:17:56]     "pilotErrorCode": 0,
[2025-11-25 14:17:56]     "pilotErrorDiag": "",
[2025-11-25 14:17:56]  *** Listing of results directory ***
[2025-11-25 14:17:56] total 1327456
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 19:34 pilot3.tar.gz
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 19:49 queuedata.json
[2025-11-25 14:17:56] -rwx------ 1 boincer umatlas     36292 Nov 23 19:50 runpilot2-wrapper.sh
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas       100 Nov 24 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:17:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 18:51 run_atlas
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas       105 Nov 24 18:51 job.xml
[2025-11-25 14:17:56] -rw-r--r-- 2 boincer umatlas 411039245 Nov 24 18:51 EVNT.47483658._001207.pool.root.1
[2025-11-25 14:17:56] drwxrwx--x 2 boincer umatlas      4096 Nov 24 18:51 shared
[2025-11-25 14:17:56] -rw-r--r-- 2 boincer umatlas    590106 Nov 24 18:51 input.tar.gz
[2025-11-25 14:17:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 18:51 start_atlas.sh
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas         0 Nov 24 18:51 boinc_lockfile
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 18:51 pandaJob.out
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas        57 Nov 24 18:51 setup.sh.local
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas    991801 Nov 24 18:51 agis_schedconf.cvmfs.json
[2025-11-25 14:17:56] drwx------ 5 boincer umatlas      4096 Nov 24 18:51 pilot3
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas       533 Nov 25 14:01 boinc_task_state.xml
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 14:11 init_data.xml
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas 920447479 Nov 25 14:16 HITS.47556149._001937.pool.root.1
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas      1066 Nov 25 14:16 memory_monitor_summary.json
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas   1516240 Nov 25 14:16 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas   2304555 Nov 25 14:16 log.47556149._001937.job.log.tgz.1
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas      8664 Nov 25 14:16 heartbeat.json
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas        95 Nov 25 14:16 pilot_heartbeat.json
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 14:17 boinc_mmap_file
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas        29 Nov 25 14:17 wrapper_checkpoint.txt
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas      4820 Nov 25 14:17 pilotlog.txt
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas   9649017 Nov 25 14:17 log.47556149._001937.job.log.1
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas       353 Nov 25 14:17 output.list
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas       620 Nov 25 14:17 runtime_log
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas  11970560 Nov 25 14:17 result.tar.gz
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas       668 Nov 25 14:17 x03LDmnxZh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmarIKDmJUZj4n.diag
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 14:17 runtime_log.err
[2025-11-25 14:17:56] -rw-r--r-- 1 boincer umatlas     21285 Nov 25 14:17 stderr.txt
[2025-11-25 14:17:56] HITS file was successfully produced:
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas 920447479 Nov 25 14:16 shared/HITS.pool.root.1
[2025-11-25 14:17:56]  *** Contents of shared directory: ***
[2025-11-25 14:17:56] total 1312580
[2025-11-25 14:17:56] -rw-r--r-- 2 boincer umatlas 411039245 Nov 24 18:51 ATLAS.root_0
[2025-11-25 14:17:56] -rw-r--r-- 2 boincer umatlas    590106 Nov 24 18:51 input.tar.gz
[2025-11-25 14:17:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 18:51 start_atlas.sh
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas 920447479 Nov 25 14:16 HITS.pool.root.1
[2025-11-25 14:17:56] -rw------- 1 boincer umatlas  11970560 Nov 25 14:17 result.tar.gz
14:17:57 (32399): run_atlas exited; CPU time 542034.495270
14:17:57 (32399): called boinc_finish(0)

</stderr_txt>
]]>

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