Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:11:05 (3527684): wrapper (7.7.26015): starting
19:11:05 (3527684): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 19:11:05] Arguments: --nthreads 8
[2025-11-24 19:11:05] Threads: 8
[2025-11-24 19:11:05] Checking for CVMFS
[2025-11-24 19:11:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:11:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:11:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:11:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:11:07] 2.13.3.0 9230 27738 319468 153263 2 138 25255216 32503808 29577 16776704 0 203482135 99.826 87810731 34132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 19:11:07] CVMFS is ok
[2025-11-24 19:11:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:11:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:11:07] Further information can be found at the LHC@home message board.
[2025-11-24 19:11:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:11:07] Checking for apptainer binary...
[2025-11-24 19:11:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:11:07] Running /usr/bin/apptainer --version
[2025-11-24 19:11:07] apptainer version 1.4.4-1.el9
[2025-11-24 19:11:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:11:07] c-4-35.aglt2.org
[2025-11-24 19:11:07] apptainer works
[2025-11-24 19:11:07] Set ATHENA_PROC_NUMBER=8
[2025-11-24 19:11:07] Set ATHENA_CORE_NUMBER=8
[2025-11-24 19:11:07] Starting ATLAS job with PandaID=6895376893
[2025-11-24 19:11:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:43:48]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:43:48] 2025-11-26 02:42:46,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:43:48] 2025-11-26 02:42:46,124 | INFO     | time since job start (95457s) is within the limit (172800.0s)
[2025-11-25 21:43:48] 2025-11-26 02:42:46,743 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 21:43:48] 2025-11-26 02:42:46,749 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1039750000004
[2025-11-25 21:43:48] 2025-11-26 02:42:46,756 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895376893/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:43:48] 2025-11-26 02:42:46,756 | INFO     | extracted standard info from prmon json
[2025-11-25 21:43:48] 2025-11-26 02:42:46,757 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:43:48] 2025-11-26 02:42:46,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:43:48] 2025-11-26 02:42:46,785 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:43:48] 2025-11-26 02:42:46,787 | INFO     | sum of square deviations: 1186272793976.6313
[2025-11-25 21:43:48] 2025-11-26 02:42:46,858 | INFO     | sum of deviations: 6514809066435.647
[2025-11-25 21:43:48] 2025-11-26 02:42:46,859 | INFO     | mean x: 1764077263.6023018
[2025-11-25 21:43:48] 2025-11-26 02:42:46,859 | INFO     | mean y: 2939595.320971867
[2025-11-25 21:43:48] 2025-11-26 02:42:46,859 | INFO     | intersect: -9685073658.59814
[2025-11-25 21:43:48] 2025-11-26 02:42:46,861 | INFO     | chi2: 7.699659621015289
[2025-11-25 21:43:48] 2025-11-26 02:42:46,863 | INFO     | sum of square deviations: 1174932251335.537
[2025-11-25 21:43:48] 2025-11-26 02:42:46,934 | INFO     | sum of deviations: 7028117807126.896
[2025-11-25 21:43:48] 2025-11-26 02:42:46,935 | INFO     | mean x: 1764077111.105837
[2025-11-25 21:43:48] 2025-11-26 02:42:46,935 | INFO     | mean y: 2946495.879409878
[2025-11-25 21:43:48] 2025-11-26 02:42:46,935 | INFO     | intersect: -10549271935.110996
[2025-11-25 21:43:48] 2025-11-26 02:42:46,937 | INFO     | chi2: 4.659531720199321
[2025-11-25 21:43:48] 2025-11-26 02:42:46,937 | INFO     | current chi2=4.659531720199321 (change=39.483925919508266 %)
[2025-11-25 21:43:48] 2025-11-26 02:42:46,939 | INFO     | sum of square deviations: 1163664221681.9026
[2025-11-25 21:43:48] 2025-11-26 02:42:47,009 | INFO     | sum of deviations: 7126507452009.934
[2025-11-25 21:43:48] 2025-11-26 02:42:47,009 | INFO     | mean x: 1764076958.609395
[2025-11-25 21:43:48] 2025-11-26 02:42:47,009 | INFO     | mean y: 2947826.3063063063
[2025-11-25 21:43:48] 2025-11-26 02:42:47,009 | INFO     | intersect: -10800604742.559607
[2025-11-25 21:43:48] 2025-11-26 02:42:47,011 | INFO     | chi2: 4.4030312143807935
[2025-11-25 21:43:48] 2025-11-26 02:42:47,011 | INFO     | current chi2=4.4030312143807935 (change=5.504855878683773 %)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,012 | INFO     | right removable region: 1553
[2025-11-25 21:43:48] 2025-11-26 02:42:47,014 | INFO     | sum of square deviations: 1174931199695.5378
[2025-11-25 21:43:48] 2025-11-26 02:42:47,084 | INFO     | sum of deviations: 5934176507527.246
[2025-11-25 21:43:48] 2025-11-26 02:42:47,085 | INFO     | mean x: 1764077416.105837
[2025-11-25 21:43:48] 2025-11-26 02:42:47,085 | INFO     | mean y: 2947400.7196921105
[2025-11-25 21:43:48] 2025-11-26 02:42:47,085 | INFO     | intersect: -8906805581.265387
[2025-11-25 21:43:48] 2025-11-26 02:42:47,087 | INFO     | chi2: 4.304145212775679
[2025-11-25 21:43:48] 2025-11-26 02:42:47,087 | INFO     | current chi2=4.304145212775679 (change=44.09953914030127 %)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,089 | INFO     | sum of square deviations: 1163662403336.5542
[2025-11-25 21:43:48] 2025-11-26 02:42:47,157 | INFO     | sum of deviations: 5685479097805.484
[2025-11-25 21:43:48] 2025-11-26 02:42:47,157 | INFO     | mean x: 1764077568.6074646
[2025-11-25 21:43:48] 2025-11-26 02:42:47,157 | INFO     | mean y: 2950763.7335907337
[2025-11-25 21:43:48] 2025-11-26 02:42:47,157 | INFO     | intersect: -8616066327.879442
[2025-11-25 21:43:48] 2025-11-26 02:42:47,159 | INFO     | chi2: 3.7011893598062344
[2025-11-25 21:43:48] 2025-11-26 02:42:47,160 | INFO     | current chi2=3.7011893598062344 (change=14.008724686605248 %)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,160 | INFO     | left removable region: 20
[2025-11-25 21:43:48] 2025-11-26 02:42:47,162 | INFO     | sum of square deviations: 1117122015858.1008
[2025-11-25 21:43:48] 2025-11-26 02:42:47,222 | INFO     | sum of deviations: 6043540502670.252
[2025-11-25 21:43:48] 2025-11-26 02:42:47,222 | INFO     | mean x: 1764077538.1167645
[2025-11-25 21:43:48] 2025-11-26 02:42:47,222 | INFO     | mean y: 2962391.920417482
[2025-11-25 21:43:48] 2025-11-26 02:42:47,222 | INFO     | intersect: -9540555594.58188
[2025-11-25 21:43:48] 2025-11-26 02:42:47,224 | INFO     | chi2: 0.28321713361542367
[2025-11-25 21:43:48] 2025-11-26 02:42:47,225 | INFO     | current memory leak: 5.41 B/s (using 1533 data points, chi2=0.28)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,226 | INFO     | could have reported an average CPU frequency of 2600 MHz (55 samples)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,226 | INFO     | ..............................
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . Timing measurements:
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . get job = 0 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . initial setup = 6 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . payload setup = 22 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . stage-in = 0 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . payload execution = 95380 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . stage-out = 3 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | . log creation = 0 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,227 | INFO     | ..............................
[2025-11-25 21:43:48] 2025-11-26 02:42:47,428 | INFO     | 
[2025-11-25 21:43:48] 2025-11-26 02:42:47,429 | INFO     | job summary report
[2025-11-25 21:43:48] 2025-11-26 02:42:47,429 | INFO     | --------------------------------------------------
[2025-11-25 21:43:48] 2025-11-26 02:42:47,429 | INFO     | PanDA job id: 6895376893
[2025-11-25 21:43:48] 2025-11-26 02:42:47,430 | INFO     | task id: 47556137
[2025-11-25 21:43:48] 2025-11-26 02:42:47,430 | INFO     | errors: (none)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:43:48] 2025-11-26 02:42:47,430 | INFO     | pilot state: finished 
[2025-11-25 21:43:48] 2025-11-26 02:42:47,430 | INFO     | transexitcode: 0
[2025-11-25 21:43:48] 2025-11-26 02:42:47,430 | INFO     | exeerrorcode: 0
[2025-11-25 21:43:48] 2025-11-26 02:42:47,431 | INFO     | exeerrordiag: 
[2025-11-25 21:43:48] 2025-11-26 02:42:47,431 | INFO     | exitcode: 0
[2025-11-25 21:43:48] 2025-11-26 02:42:47,437 | INFO     | exitmsg: OK
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | cpuconsumptiontime: 302382 s
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | nevents: 1000
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | neventsw: 0
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | pid: 3541440
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | pgrp: 3541440
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | corecount: 8
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | event service: False
[2025-11-25 21:43:48] 2025-11-26 02:42:47,438 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 21: 2284628, 23: 2284656, 95406: 2353564, 95410: 2362563, 95412: 2362619, 95419: 2362865}
[2025-11-25 21:43:48] 2025-11-26 02:42:47,439 | INFO     | --------------------------------------------------
[2025-11-25 21:43:48] 2025-11-26 02:42:47,439 | INFO     | 
[2025-11-25 21:43:48] 2025-11-26 02:42:47,439 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 21:43:48] 2025-11-26 02:42:47,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:43:48] 2025-11-26 02:42:47,462 | INFO     | job 6895376893 has completed (purged errors)
[2025-11-25 21:43:48] 2025-11-26 02:42:47,463 | INFO     | overall cleanup function is called
[2025-11-25 21:43:48] 2025-11-26 02:42:48,490 | INFO     | --- collectZombieJob: --- 10, [3541440]
[2025-11-25 21:43:48] 2025-11-26 02:42:48,490 | INFO     | zombie collector waiting for pid 3541440
[2025-11-25 21:43:48] 2025-11-26 02:42:48,490 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:43:48] 2025-11-26 02:42:48,490 | INFO     | collected zombie processes
[2025-11-25 21:43:48] 2025-11-26 02:42:48,491 | INFO     | will attempt to kill all subprocesses of pid=3541440
[2025-11-25 21:43:48] 2025-11-26 02:42:48,982 | INFO     | process IDs to be killed: [3541440] (in reverse order)
[2025-11-25 21:43:48] 2025-11-26 02:42:49,111 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:43:48] 2025-11-26 02:42:49,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:43:48] 2025-11-26 02:42:49,127 | INFO     | did not find any defunct processes belonging to 3541440
[2025-11-25 21:43:48] 2025-11-26 02:42:49,142 | INFO     | did not find any defunct processes belonging to 3541440
[2025-11-25 21:43:48] 2025-11-26 02:42:49,144 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:43:48] 2025-11-26 02:42:49,144 | INFO     | ready for new job
[2025-11-25 21:43:48] 2025-11-26 02:42:49,144 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:43:48] 2025-11-26 02:42:49,150 | INFO     | ***************************************
[2025-11-25 21:43:48] 2025-11-26 02:42:49,151 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:43:48] 2025-11-26 02:42:49,151 | INFO     | ***************************************
[2025-11-25 21:43:48] 2025-11-26 02:42:49,151 | INFO     | 
[2025-11-25 21:43:48] 2025-11-26 02:42:49,153 | INFO     | architecture information:
[2025-11-25 21:43:48] 2025-11-26 02:42:49,153 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:43:48] 2025-11-26 02:42:49,175 | INFO     | cat /etc/os-release:
[2025-11-25 21:43:48] NAME="CentOS Linux"
[2025-11-25 21:43:48] VERSION="7 (Core)"
[2025-11-25 21:43:48] ID="centos"
[2025-11-25 21:43:48] ID_LIKE="rhel fedora"
[2025-11-25 21:43:48] VERSION_ID="7"
[2025-11-25 21:43:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:43:48] ANSI_COLOR="0;31"
[2025-11-25 21:43:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:43:48] HOME_URL="https://www.centos.org/"
[2025-11-25 21:43:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:43:48] 
[2025-11-25 21:43:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:43:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:43:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:43:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:43:48] 
[2025-11-25 21:43:48] 2025-11-26 02:42:49,176 | INFO     | ***************************************
[2025-11-25 21:43:48] 2025-11-26 02:42:49,678 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 21:43:48] 2025-11-26 02:42:49,696 | INFO     | sufficient remaining disk space (91868889088 B)
[2025-11-25 21:43:48] 2025-11-26 02:42:49,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:43:48] 2025-11-26 02:42:49,697 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:43:48] 2025-11-26 02:42:49,697 | INFO     | update_server=False
[2025-11-25 21:43:48] 2025-11-26 02:42:49,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:43:48] 2025-11-26 02:42:49,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:43:48] 2025-11-26 02:42:49,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:43:48] 2025-11-26 02:42:49,698 | INFO     | aborting loop
[2025-11-25 21:43:48] 2025-11-26 02:42:49,866 | INFO     | all payload control threads have been joined
[2025-11-25 21:43:48] 2025-11-26 02:42:50,094 | INFO     | all job control threads have been joined
[2025-11-25 21:43:48] 2025-11-26 02:42:50,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:43:48] 2025-11-26 02:42:50,627 | INFO     | all data control threads have been joined
[2025-11-25 21:43:48] 2025-11-26 02:42:50,702 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:50,702 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:50,760 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:50,871 | INFO     | [payload] control thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,064 | INFO     | [job] validate thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,099 | INFO     | [job] control thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,252 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,329 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,614 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,626 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,627 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,632 | INFO     | [data] control thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:51,703 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:52,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:43:48] 2025-11-26 02:42:53,371 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:42:54,329 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:43:00,063 | INFO     | job.realtimelogging is not enabled
[2025-11-25 21:43:48] 2025-11-26 02:43:01,069 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:43:48] 2025-11-26 02:43:19,739 | INFO     | PID=3531396 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 21:43:48] 2025-11-26 02:43:19,739 | INFO     | .. there are 43 such processes running
[2025-11-25 21:43:48] 2025-11-26 02:43:19,740 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:43:48] 2025-11-26 02:43:19,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:43:48] 2025-11-26 02:43:19,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:43:48] 2025-11-26 02:43:42,353 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:43:48] 2025-11-26 02:43:43,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844759299904)>', '<ExcThread(monitor, started 139844487452416)>']
[2025-11-25 21:43:48] 2025-11-26 02:43:43,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:43:48] 2025-11-26 02:43:43,864 | INFO     | [monitor] control thread has ended
[2025-11-25 21:43:48] 2025-11-26 02:43:48,469 | INFO     | all workflow threads have been joined
[2025-11-25 21:43:48] 2025-11-26 02:43:48,469 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:43:48] 2025-11-26 02:43:48,470 | INFO     | traces error code: 0
[2025-11-25 21:43:48] 2025-11-26 02:43:48,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:43:48] 2025-11-26 02:43:48,614 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:43:48] 2025-11-26 02:43:48,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:43:48] 2025-11-26 02:43:48,619 [wrapper] pilotpid: 3531396
[2025-11-25 21:43:48] 2025-11-26 02:43:48,622 [wrapper] Pilot exit status: 0
[2025-11-25 21:43:48] 2025-11-26 02:43:48,632 [wrapper] pandaids: 6895376893
[2025-11-25 21:43:48] 2025-11-26 02:43:48,720 [wrapper] cleanup supervisor_pilot  443137 3531397
[2025-11-25 21:43:48] 2025-11-26 02:43:48,723 [wrapper] Test setup, not cleaning
[2025-11-25 21:43:48] 2025-11-26 02:43:48,726 [wrapper] apfmon messages muted
[2025-11-25 21:43:48] 2025-11-26 02:43:48,729 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:43:48] 2025-11-26 02:43:48,732 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:43:48]  *** Error codes and diagnostics ***
[2025-11-25 21:43:48]     "exeErrorCode": 0,
[2025-11-25 21:43:48]     "exeErrorDiag": "",
[2025-11-25 21:43:48]     "pilotErrorCode": 0,
[2025-11-25 21:43:48]     "pilotErrorDiag": "",
[2025-11-25 21:43:48]  *** Listing of results directory ***
[2025-11-25 21:43:48] total 1319428
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 19:34 pilot3.tar.gz
[2025-11-25 21:43:48] -rwx------. 1 boincer umatlas     36292 Nov 23 19:42 runpilot2-wrapper.sh
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 19:42 queuedata.json
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas       100 Nov 24 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:43:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 19:11 run_atlas
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas       105 Nov 24 19:11 job.xml
[2025-11-25 21:43:48] -rw-r--r--. 2 boincer umatlas 408354064 Nov 24 19:11 EVNT.47483658._000966.pool.root.1
[2025-11-25 21:43:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 19:11 start_atlas.sh
[2025-11-25 21:43:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 19:11 shared
[2025-11-25 21:43:48] -rw-r--r--. 2 boincer umatlas    590092 Nov 24 19:11 input.tar.gz
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas         0 Nov 24 19:11 boinc_lockfile
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 19:11 pandaJob.out
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas        57 Nov 24 19:11 setup.sh.local
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas    991801 Nov 24 19:11 agis_schedconf.cvmfs.json
[2025-11-25 21:43:48] drwx------. 5 boincer umatlas      4096 Nov 24 19:11 pilot3
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas       533 Nov 25 21:32 boinc_task_state.xml
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas      6661 Nov 25 21:37 init_data.xml
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas 910018085 Nov 25 21:41 HITS.47556137._009530.pool.root.1
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas      1057 Nov 25 21:42 memory_monitor_summary.json
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas   1516240 Nov 25 21:42 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas   2544186 Nov 25 21:42 log.47556137._009530.job.log.tgz.1
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas      8614 Nov 25 21:42 heartbeat.json
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas        95 Nov 25 21:43 pilot_heartbeat.json
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 21:43 boinc_mmap_file
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas        29 Nov 25 21:43 wrapper_checkpoint.txt
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas      4897 Nov 25 21:43 pilotlog.txt
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas  11855520 Nov 25 21:43 log.47556137._009530.job.log.1
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas       353 Nov 25 21:43 output.list
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas       620 Nov 25 21:43 runtime_log
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas  14417920 Nov 25 21:43 result.tar.gz
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 21:43 runtime_log.err
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas       658 Nov 25 21:43 iFZMDmppZh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwJLKDmLapnsm.diag
[2025-11-25 21:43:48] -rw-r--r--. 1 boincer umatlas     21328 Nov 25 21:43 stderr.txt
[2025-11-25 21:43:48] HITS file was successfully produced:
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas 910018085 Nov 25 21:41 shared/HITS.pool.root.1
[2025-11-25 21:43:48]  *** Contents of shared directory: ***
[2025-11-25 21:43:48] total 1302160
[2025-11-25 21:43:48] -rw-r--r--. 2 boincer umatlas 408354064 Nov 24 19:11 ATLAS.root_0
[2025-11-25 21:43:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 19:11 start_atlas.sh
[2025-11-25 21:43:48] -rw-r--r--. 2 boincer umatlas    590092 Nov 24 19:11 input.tar.gz
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas 910018085 Nov 25 21:41 HITS.pool.root.1
[2025-11-25 21:43:48] -rw-------. 1 boincer umatlas  14417920 Nov 25 21:43 result.tar.gz
21:43:50 (3527684): run_atlas exited; CPU time 305551.827812
21:43:50 (3527684): called boinc_finish(0)

</stderr_txt>
]]>

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