Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:57:52 (13585): wrapper (7.7.26015): starting
00:57:52 (13585): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:57:52] Arguments: --nthreads 8
[2025-11-27 00:57:52] Threads: 8
[2025-11-27 00:57:52] Checking for CVMFS
[2025-11-27 00:57:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:57:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:57:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:57:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:57:55] 2.11.2.0 8404 286064 145624 153340 0 85 21509590 25165824 1288 130560 12 143579222 99.890 79133908 3479 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 00:57:55] CVMFS is ok
[2025-11-27 00:57:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:57:55] Checking for apptainer binary...
[2025-11-27 00:57:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:57:55] Running /usr/bin/apptainer --version
[2025-11-27 00:57:55] apptainer version 1.3.2-1.el7
[2025-11-27 00:57:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:58:18] cg-vwn309.simple-grid.lan
[2025-11-27 00:58:18] apptainer works
[2025-11-27 00:58:18] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:58:18] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:58:18] Starting ATLAS job with PandaID=6895328338
[2025-11-27 00:58:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:59:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:59:56] 2025-11-27 22:58:34,228 | INFO     | monitor loop #5565: job 0:6895328338 is in state 'finished'
[2025-11-27 23:59:56] 2025-11-27 22:58:34,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:59:56] 2025-11-27 22:58:36,089 | INFO     | time since job start (82575s) is within the limit (172800.0s)
[2025-11-27 23:59:56] 2025-11-27 22:58:36,735 | INFO     | monitor loop #5566: job 0:6895328338 is in state 'finished'
[2025-11-27 23:59:56] 2025-11-27 22:58:36,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:59:56] 2025-11-27 22:58:38,096 | INFO     | time since job start (82577s) is within the limit (172800.0s)
[2025-11-27 23:59:56] 2025-11-27 22:58:39,240 | INFO     | monitor loop #5567: job 0:6895328338 is in state 'finished'
[2025-11-27 23:59:56] 2025-11-27 22:58:39,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:59:56] 2025-11-27 22:58:40,103 | INFO     | time since job start (82579s) is within the limit (172800.0s)
[2025-11-27 23:59:56] 2025-11-27 22:58:41,745 | INFO     | monitor loop #5568: job 0:6895328338 is in state 'finished'
[2025-11-27 23:59:56] 2025-11-27 22:58:41,745 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:59:56] 2025-11-27 22:58:42,115 | INFO     | time since job start (82581s) is within the limit (172800.0s)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,293 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:59:56] 2025-11-27 22:58:43,294 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 23:59:56] 2025-11-27 22:58:43,295 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6895328338/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,296 | INFO     | extracted standard info from prmon json
[2025-11-27 23:59:56] 2025-11-27 22:58:43,296 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:59:56] 2025-11-27 22:58:43,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:59:56] 2025-11-27 22:58:43,320 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:59:56] 2025-11-27 22:58:43,322 | INFO     | sum of square deviations: 752792815670.9996
[2025-11-27 23:59:56] 2025-11-27 22:58:43,375 | INFO     | sum of deviations: 2897505522312.37
[2025-11-27 23:59:56] 2025-11-27 22:58:43,376 | INFO     | mean x: 1764243215.5721726
[2025-11-27 23:59:56] 2025-11-27 22:58:43,376 | INFO     | mean y: 2838739.4910714286
[2025-11-27 23:59:56] 2025-11-27 22:58:43,376 | INFO     | intersect: -6787747399.758973
[2025-11-27 23:59:56] 2025-11-27 22:58:43,378 | INFO     | chi2: 22.086111131244028
[2025-11-27 23:59:56] 2025-11-27 22:58:43,380 | INFO     | sum of square deviations: 744422754040.2302
[2025-11-27 23:59:56] 2025-11-27 22:58:43,468 | INFO     | sum of deviations: 3346285130205.473
[2025-11-27 23:59:56] 2025-11-27 22:58:43,468 | INFO     | mean x: 1764243063.0761762
[2025-11-27 23:59:56] 2025-11-27 22:58:43,468 | INFO     | mean y: 2846915.4660194176
[2025-11-27 23:59:56] 2025-11-27 22:58:43,468 | INFO     | intersect: -7927674143.970751
[2025-11-27 23:59:56] 2025-11-27 22:58:43,470 | INFO     | chi2: 18.803917302010397
[2025-11-27 23:59:56] 2025-11-27 22:58:43,470 | INFO     | current chi2=18.803917302010397 (change=14.860895201194966 %)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,470 | INFO     | right removable region: 1338
[2025-11-27 23:59:56] 2025-11-27 22:58:43,476 | INFO     | sum of square deviations: 744421875030.2297
[2025-11-27 23:59:56] 2025-11-27 22:58:43,579 | INFO     | sum of deviations: 2336155917283.9214
[2025-11-27 23:59:56] 2025-11-27 22:58:43,579 | INFO     | mean x: 1764243368.0761762
[2025-11-27 23:59:56] 2025-11-27 22:58:43,580 | INFO     | mean y: 2848965.5399551904
[2025-11-27 23:59:56] 2025-11-27 22:58:43,580 | INFO     | intersect: -5533726089.69026
[2025-11-27 23:59:56] 2025-11-27 22:58:43,581 | INFO     | chi2: 17.425165872805213
[2025-11-27 23:59:56] 2025-11-27 22:58:43,582 | INFO     | current chi2=17.425165872805213 (change=21.10351265889099 %)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,582 | INFO     | left removable region: 10
[2025-11-27 23:59:56] 2025-11-27 22:58:43,584 | INFO     | sum of square deviations: 726225759420.3851
[2025-11-27 23:59:56] 2025-11-27 22:58:43,697 | INFO     | sum of deviations: 2419343478094.9473
[2025-11-27 23:59:56] 2025-11-27 22:58:43,698 | INFO     | mean x: 1764243337.5850904
[2025-11-27 23:59:56] 2025-11-27 22:58:43,698 | INFO     | mean y: 2867883.451807229
[2025-11-27 23:59:56] 2025-11-27 22:58:43,698 | INFO     | intersect: -5874520183.814731
[2025-11-27 23:59:56] 2025-11-27 22:58:43,699 | INFO     | chi2: 10.029569214674492
[2025-11-27 23:59:56] 2025-11-27 22:58:43,700 | INFO     | current memory leak: 3.33 B/s (using 1328 data points, chi2=10.03)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | ..............................
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . Timing measurements:
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . get job = 0 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . initial setup = 5 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . payload setup = 164 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . stage-in = 0 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . payload execution = 82151 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,701 | INFO     | . stage-out = 5 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,702 | INFO     | . log creation = 2 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,702 | INFO     | ..............................
[2025-11-27 23:59:56] 2025-11-27 22:58:43,842 | INFO     | 
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | job summary report
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | --------------------------------------------------
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | PanDA job id: 6895328338
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | task id: 47556137
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | errors: (none)
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | pilot state: finished 
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | transexitcode: 0
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | exeerrorcode: 0
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | exeerrordiag: 
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | exitcode: 0
[2025-11-27 23:59:56] 2025-11-27 22:58:43,843 | INFO     | exitmsg: OK
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | cpuconsumptiontime: 310512 s
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | nevents: 1000
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | neventsw: 0
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | pid: 23940
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | pgrp: 23940
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | corecount: 8
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | event service: False
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | sizes: {0: 2284141, 1: 2284340, 12: 2284340, 22: 2284368, 33: 2284396, 44: 2284452, 54: 2284608, 65: 2284636, 76: 2284664, 85: 2284982, 87: 2285010, 82316: 2345237
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | --------------------------------------------------
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | 
[2025-11-27 23:59:56] 2025-11-27 22:58:43,844 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-11-27 23:59:56] 2025-11-27 22:58:44,128 | INFO     | time since job start (82583s) is within the limit (172800.0s)
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:59:56] 2025-11-27 22:58:44,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:59:56] 2025-11-27 22:58:44,176 | INFO     | job 6895328338 has completed (purged errors)
[2025-11-27 23:59:56] 2025-11-27 22:58:44,176 | INFO     | overall cleanup function is called
[2025-11-27 23:59:56] 2025-11-27 22:58:45,195 | INFO     | --- collectZombieJob: --- 10, [23940]
[2025-11-27 23:59:56] 2025-11-27 22:58:45,196 | INFO     | zombie collector waiting for pid 23940
[2025-11-27 23:59:56] 2025-11-27 22:58:45,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:59:56] 2025-11-27 22:58:45,196 | INFO     | collected zombie processes
[2025-11-27 23:59:56] 2025-11-27 22:58:45,196 | INFO     | will attempt to kill all subprocesses of pid=23940
[2025-11-27 23:59:56] 2025-11-27 22:58:45,313 | INFO     | process IDs to be killed: [23940] (in reverse order)
[2025-11-27 23:59:56] 2025-11-27 22:58:45,477 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:59:56] 2025-11-27 22:58:45,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:59:56] 2025-11-27 22:58:45,480 | INFO     | did not find any defunct processes belonging to 23940
[2025-11-27 23:59:56] 2025-11-27 22:58:45,482 | INFO     | did not find any defunct processes belonging to 23940
[2025-11-27 23:59:56] 2025-11-27 22:58:45,493 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:59:56] 2025-11-27 22:58:45,493 | INFO     | ready for new job
[2025-11-27 23:59:56] 2025-11-27 22:58:45,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:59:56] 2025-11-27 22:58:45,498 | INFO     | ***************************************
[2025-11-27 23:59:56] 2025-11-27 22:58:45,498 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:59:56] 2025-11-27 22:58:45,499 | INFO     | ***************************************
[2025-11-27 23:59:56] 2025-11-27 22:58:45,499 | INFO     | 
[2025-11-27 23:59:56] 2025-11-27 22:58:45,499 | INFO     | pilot is running in a VM
[2025-11-27 23:59:56] 2025-11-27 22:58:45,499 | INFO     | architecture information:
[2025-11-27 23:59:56] 2025-11-27 22:58:45,500 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:59:56] 2025-11-27 22:58:45,656 | INFO     | cat /etc/os-release:
[2025-11-27 23:59:56] NAME="CentOS Linux"
[2025-11-27 23:59:56] VERSION="7 (Core)"
[2025-11-27 23:59:56] ID="centos"
[2025-11-27 23:59:56] ID_LIKE="rhel fedora"
[2025-11-27 23:59:56] VERSION_ID="7"
[2025-11-27 23:59:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:59:56] ANSI_COLOR="0;31"
[2025-11-27 23:59:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:59:56] HOME_URL="https://www.centos.org/"
[2025-11-27 23:59:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:59:56] 
[2025-11-27 23:59:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:59:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:59:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:59:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:59:56] 
[2025-11-27 23:59:56] 2025-11-27 22:58:45,656 | INFO     | ***************************************
[2025-11-27 23:59:56] 2025-11-27 22:58:46,159 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-11-27 23:59:56] 2025-11-27 22:58:46,383 | INFO     | sufficient remaining disk space (495447965696 B)
[2025-11-27 23:59:56] 2025-11-27 22:58:46,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:59:56] 2025-11-27 22:58:46,384 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:59:56] 2025-11-27 22:58:46,384 | INFO     | update_server=False
[2025-11-27 23:59:56] 2025-11-27 22:58:46,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:59:56] 2025-11-27 22:58:46,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:59:56] 2025-11-27 22:58:46,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:59:56] 2025-11-27 22:58:46,780 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 23:59:56] 2025-11-27 22:58:46,781 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 23:59:56] 2025-11-27 22:58:46,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:59:56] 2025-11-27 22:58:46,781 | INFO     | will abort loop
[2025-11-27 23:59:56] 2025-11-27 22:58:46,927 | INFO     | all payload control threads have been joined
[2025-11-27 23:59:56] 2025-11-27 22:58:47,033 | INFO     | all job control threads have been joined
[2025-11-27 23:59:56] 2025-11-27 22:58:47,355 | INFO     | all data control threads have been joined
[2025-11-27 23:59:56] 2025-11-27 22:58:47,389 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:47,669 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:47,759 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:47,786 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:47,933 | INFO     | [payload] control thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:47,992 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,039 | INFO     | [job] control thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,148 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,361 | INFO     | [data] control thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,391 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,512 | INFO     | [job] validate thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,513 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:48,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:59:56] 2025-11-27 22:58:48,851 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:49,834 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:50,393 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:58:57,090 | INFO     | job.realtimelogging is not enabled
[2025-11-27 23:59:56] 2025-11-27 22:58:58,096 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:59:56] 2025-11-27 22:59:17,282 | INFO     | PID=17393 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:59:56] 2025-11-27 22:59:17,282 | INFO     | .. there are 9 such processes running
[2025-11-27 23:59:56] 2025-11-27 22:59:17,284 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:59:56] 2025-11-27 22:59:17,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:59:56] 2025-11-27 22:59:17,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:59:56] 2025-11-27 22:59:44,428 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:59:56] 2025-11-27 22:59:46,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234066638656)>', '<ExcThread(monitor, started 140233467213568)>']
[2025-11-27 23:59:56] 2025-11-27 22:59:46,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:59:56] 2025-11-27 22:59:46,456 | INFO     | [monitor] control thread has ended
[2025-11-27 23:59:56] 2025-11-27 22:59:51,119 | INFO     | all workflow threads have been joined
[2025-11-27 23:59:56] 2025-11-27 22:59:51,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:59:56] 2025-11-27 22:59:51,120 | INFO     | traces error code: 0
[2025-11-27 23:59:56] 2025-11-27 22:59:51,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:59:56] 2025-11-27 22:59:51,407 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:59:56] 2025-11-27 22:59:51,498 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:59:56] 2025-11-27 22:59:51,585 [wrapper] pilotpid: 17393
[2025-11-27 23:59:56] 2025-11-27 22:59:51,681 [wrapper] Pilot exit status: 0
[2025-11-27 23:59:56] 2025-11-27 22:59:52,190 [wrapper] pandaids: 6895328338
[2025-11-27 23:59:56] 2025-11-27 22:59:53,361 [wrapper] cleanup supervisor_pilot 23793 17394
[2025-11-27 23:59:56] 2025-11-27 22:59:53,487 [wrapper] Test setup, not cleaning
[2025-11-27 23:59:56] 2025-11-27 22:59:53,594 [wrapper] apfmon messages muted
[2025-11-27 23:59:56] 2025-11-27 22:59:53,694 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:59:56] 2025-11-27 22:59:53,747 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:59:56]  *** Error codes and diagnostics ***
[2025-11-27 23:59:56]     "exeErrorCode": 0,
[2025-11-27 23:59:56]     "exeErrorDiag": "",
[2025-11-27 23:59:56]     "pilotErrorCode": 0,
[2025-11-27 23:59:56]     "pilotErrorDiag": "",
[2025-11-27 23:59:56]  *** Listing of results directory ***
[2025-11-27 23:59:56] total 1327276
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc    576529 Nov 21 17:49 pilot3.tar.gz
[2025-11-27 23:59:56] -rwx------. 1 boinc boinc     36292 Nov 21 17:59 runpilot2-wrapper.sh
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc      5112 Nov 21 17:59 queuedata.json
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc       100 Nov 27 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:59:56] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 00:57 run_atlas
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc       105 Nov 27 00:57 job.xml
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc      6392 Nov 27 00:57 init_data.xml
[2025-11-27 23:59:56] -rw-r--r--. 2 boinc boinc 410485161 Nov 27 00:57 EVNT.47483658._000072.pool.root.1
[2025-11-27 23:59:56] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:57 start_atlas.sh
[2025-11-27 23:59:56] drwxrwx--x. 2 boinc boinc        68 Nov 27 00:57 shared
[2025-11-27 23:59:56] -rw-r--r--. 2 boinc boinc    590095 Nov 27 00:57 input.tar.gz
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc         0 Nov 27 00:57 boinc_lockfile
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc      2784 Nov 27 00:58 pandaJob.out
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc    991538 Nov 27 01:02 agis_schedconf.cvmfs.json
[2025-11-27 23:59:56] drwx------. 5 boinc boinc      4096 Nov 27 01:02 pilot3
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc       533 Nov 27 23:37 boinc_task_state.xml
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc 917801861 Nov 27 23:55 HITS.47556137._000720.pool.root.1
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc      1029 Nov 27 23:57 memory_monitor_summary.json
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc   1516240 Nov 27 23:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc   2442246 Nov 27 23:57 log.47556137._000720.job.log.tgz.1
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc      8627 Nov 27 23:58 heartbeat.json
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc        95 Nov 27 23:59 pilot_heartbeat.json
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc      8192 Nov 27 23:59 boinc_mmap_file
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc        29 Nov 27 23:59 wrapper_checkpoint.txt
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc      5143 Nov 27 23:59 pilotlog.txt
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc  11025436 Nov 27 23:59 log.47556137._000720.job.log.1
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc       353 Nov 27 23:59 output.list
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc       620 Nov 27 23:59 runtime_log
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc  13486080 Nov 27 23:59 result.tar.gz
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc      8833 Nov 27 23:59 runtime_log.err
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc       662 Nov 27 23:59 gfwMDmkejg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeZJKDmmoHGGm.diag
[2025-11-27 23:59:56] -rw-r--r--. 1 boinc boinc     21392 Nov 27 23:59 stderr.txt
[2025-11-27 23:59:56] HITS file was successfully produced:
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc 917801861 Nov 27 23:55 shared/HITS.pool.root.1
[2025-11-27 23:59:56]  *** Contents of shared directory: ***
[2025-11-27 23:59:56] total 1310928
[2025-11-27 23:59:56] -rw-r--r--. 2 boinc boinc 410485161 Nov 27 00:57 ATLAS.root_0
[2025-11-27 23:59:56] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:57 start_atlas.sh
[2025-11-27 23:59:56] -rw-r--r--. 2 boinc boinc    590095 Nov 27 00:57 input.tar.gz
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc 917801861 Nov 27 23:55 HITS.pool.root.1
[2025-11-27 23:59:56] -rw-------. 1 boinc boinc  13486080 Nov 27 23:59 result.tar.gz
23:59:58 (13585): run_atlas exited; CPU time 311047.759349
23:59:58 (13585): called boinc_finish(0)

</stderr_txt>
]]>

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