Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:46 (2558935): wrapper (7.7.26015): starting
18:52:46 (2558935): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 18:52:46] Arguments: --nthreads 8
[2025-11-24 18:52:46] Threads: 8
[2025-11-24 18:52:46] Checking for CVMFS
[2025-11-24 18:52:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:52:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:52:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:52:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:52:48] 2.13.3.0 12348 27855 376488 153263 1 136 32483518 32935937 33267 16776704 0 138599058 99.504 173958080 35503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 18:52:48] CVMFS is ok
[2025-11-24 18:52:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:52:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:52:48] Further information can be found at the LHC@home message board.
[2025-11-24 18:52:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:52:48] Checking for apptainer binary...
[2025-11-24 18:52:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:52:48] Running /usr/bin/apptainer --version
[2025-11-24 18:52:48] apptainer version 1.4.4-1.el9
[2025-11-24 18:52:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:52:49] c6-12-27-2.aglt2.org
[2025-11-24 18:52:49] apptainer works
[2025-11-24 18:52:49] Set ATHENA_PROC_NUMBER=8
[2025-11-24 18:52:49] Set ATHENA_CORE_NUMBER=8
[2025-11-24 18:52:49] Starting ATLAS job with PandaID=6895361894
[2025-11-24 18:52:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:15:19]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:15:19] 2025-11-25 20:14:31,705 | INFO     | time since job start (73242s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:33,222 | INFO     | monitor loop #3886: job 0:6895361894 is in state 'finished'
[2025-11-25 15:15:19] 2025-11-25 20:14:33,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:15:19] 2025-11-25 20:14:33,712 | INFO     | time since job start (73244s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:35,720 | INFO     | time since job start (73246s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:35,729 | INFO     | monitor loop #3887: job 0:6895361894 is in state 'finished'
[2025-11-25 15:15:19] 2025-11-25 20:14:35,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:15:19] 2025-11-25 20:14:37,726 | INFO     | time since job start (73248s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:38,239 | INFO     | monitor loop #3888: job 0:6895361894 is in state 'finished'
[2025-11-25 15:15:19] 2025-11-25 20:14:38,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:15:19] 2025-11-25 20:14:39,733 | INFO     | time since job start (73250s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:40,744 | INFO     | monitor loop #3889: job 0:6895361894 is in state 'finished'
[2025-11-25 15:15:19] 2025-11-25 20:14:40,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:15:19] 2025-11-25 20:14:41,740 | INFO     | time since job start (73252s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:43,255 | INFO     | monitor loop #3890: job 0:6895361894 is in state 'finished'
[2025-11-25 15:15:19] 2025-11-25 20:14:43,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:15:19] 2025-11-25 20:14:43,749 | INFO     | time since job start (73254s) is within the limit (172800.0s)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,023 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 15:15:19] 2025-11-25 20:14:44,083 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2758.873406250002
[2025-11-25 15:15:19] 2025-11-25 20:14:44,119 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895361894/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,119 | INFO     | extracted standard info from prmon json
[2025-11-25 15:15:19] 2025-11-25 20:14:44,119 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:15:19] 2025-11-25 20:14:44,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:15:19] 2025-11-25 20:14:44,148 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:15:19] 2025-11-25 20:14:44,150 | INFO     | sum of square deviations: 534485599970.38696
[2025-11-25 15:15:19] 2025-11-25 20:14:44,175 | INFO     | sum of deviations: 2303925482879.5894
[2025-11-25 15:15:19] 2025-11-25 20:14:44,175 | INFO     | mean x: 1764065098.9015846
[2025-11-25 15:15:19] 2025-11-25 20:14:44,175 | INFO     | mean y: 2880887.3778148456
[2025-11-25 15:15:19] 2025-11-25 20:14:44,175 | INFO     | intersect: -7601205237.754543
[2025-11-25 15:15:19] 2025-11-25 20:14:44,177 | INFO     | chi2: 15.99872147422625
[2025-11-25 15:15:19] 2025-11-25 20:14:44,178 | INFO     | sum of square deviations: 527828232066.4541
[2025-11-25 15:15:19] 2025-11-25 20:14:44,208 | INFO     | sum of deviations: 2693053669113.352
[2025-11-25 15:15:19] 2025-11-25 20:14:44,208 | INFO     | mean x: 1764064946.417923
[2025-11-25 15:15:19] 2025-11-25 20:14:44,208 | INFO     | mean y: 2889798.319932998
[2025-11-25 15:15:19] 2025-11-25 20:14:44,208 | INFO     | intersect: -8997616972.426115
[2025-11-25 15:15:19] 2025-11-25 20:14:44,209 | INFO     | chi2: 12.894926533678131
[2025-11-25 15:15:19] 2025-11-25 20:14:44,210 | INFO     | current chi2=12.894926533678131 (change=19.400268612390654 %)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,210 | INFO     | right removable region: 1193
[2025-11-25 15:15:19] 2025-11-25 20:14:44,211 | INFO     | sum of square deviations: 527825378486.45374
[2025-11-25 15:15:19] 2025-11-25 20:14:44,278 | INFO     | sum of deviations: 1865083599215.9858
[2025-11-25 15:15:19] 2025-11-25 20:14:44,278 | INFO     | mean x: 1764065251.417923
[2025-11-25 15:15:19] 2025-11-25 20:14:44,278 | INFO     | mean y: 2890933.729480737
[2025-11-25 15:15:19] 2025-11-25 20:14:44,279 | INFO     | intersect: -6230475824.422395
[2025-11-25 15:15:19] 2025-11-25 20:14:44,288 | INFO     | chi2: 12.627744931203576
[2025-11-25 15:15:19] 2025-11-25 20:14:44,289 | INFO     | current chi2=12.627744931203576 (change=21.0702870754596 %)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,289 | INFO     | left removable region: 10
[2025-11-25 15:15:19] 2025-11-25 20:14:44,290 | INFO     | sum of square deviations: 513371763933.1562
[2025-11-25 15:15:19] 2025-11-25 20:14:44,343 | INFO     | sum of deviations: 2159925712251.2388
[2025-11-25 15:15:19] 2025-11-25 20:14:44,344 | INFO     | mean x: 1764065220.950972
[2025-11-25 15:15:19] 2025-11-25 20:14:44,344 | INFO     | mean y: 2905760.74556213
[2025-11-25 15:15:19] 2025-11-25 20:14:44,344 | INFO     | intersect: -7419103193.600206
[2025-11-25 15:15:19] 2025-11-25 20:14:44,345 | INFO     | chi2: 8.315308189947437
[2025-11-25 15:15:19] 2025-11-25 20:14:44,350 | INFO     | current memory leak: 4.21 B/s (using 1183 data points, chi2=8.32)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,351 | INFO     | could have reported an average CPU frequency of 2685 MHz (43 samples)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | ..............................
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . Timing measurements:
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . get job = 0 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . initial setup = 3 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . payload setup = 37 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . stage-in = 0 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . payload execution = 73117 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . stage-out = 6 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | . log creation = 1 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,352 | INFO     | ..............................
[2025-11-25 15:15:19] 2025-11-25 20:14:44,507 | INFO     | 
[2025-11-25 15:15:19] 2025-11-25 20:14:44,507 | INFO     | job summary report
[2025-11-25 15:15:19] 2025-11-25 20:14:44,507 | INFO     | --------------------------------------------------
[2025-11-25 15:15:19] 2025-11-25 20:14:44,507 | INFO     | PanDA job id: 6895361894
[2025-11-25 15:15:19] 2025-11-25 20:14:44,507 | INFO     | task id: 47556137
[2025-11-25 15:15:19] 2025-11-25 20:14:44,507 | INFO     | errors: (none)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | pilot state: finished 
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | transexitcode: 0
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | exeerrorcode: 0
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | exeerrordiag: 
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | exitcode: 0
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | exitmsg: OK
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | cpuconsumptiontime: 258375 s
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | nevents: 1000
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | neventsw: 0
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | pid: 2578883
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | pgrp: 2578883
[2025-11-25 15:15:19] 2025-11-25 20:14:44,508 | INFO     | corecount: 8
[2025-11-25 15:15:19] 2025-11-25 20:14:44,509 | INFO     | event service: False
[2025-11-25 15:15:19] 2025-11-25 20:14:44,509 | INFO     | sizes: {0: 2284088, 1: 2284116, 2: 2284315, 13: 2284315, 23: 2284371, 29: 2284661, 35: 2284817, 73158: 2343005, 73165: 2352004, 73167: 2352088, 73192: 2352334}
[2025-11-25 15:15:19] 2025-11-25 20:14:44,509 | INFO     | --------------------------------------------------
[2025-11-25 15:15:19] 2025-11-25 20:14:44,509 | INFO     | 
[2025-11-25 15:15:19] 2025-11-25 20:14:44,509 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 15:15:19] 2025-11-25 20:14:44,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | job 6895361894 has completed (purged errors)
[2025-11-25 15:15:19] 2025-11-25 20:14:44,615 | INFO     | overall cleanup function is called
[2025-11-25 15:15:19] 2025-11-25 20:14:45,697 | INFO     | --- collectZombieJob: --- 10, [2578883]
[2025-11-25 15:15:19] 2025-11-25 20:14:45,699 | INFO     | zombie collector waiting for pid 2578883
[2025-11-25 15:15:19] 2025-11-25 20:14:45,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:15:19] 2025-11-25 20:14:45,700 | INFO     | collected zombie processes
[2025-11-25 15:15:19] 2025-11-25 20:14:45,700 | INFO     | will attempt to kill all subprocesses of pid=2578883
[2025-11-25 15:15:19] 2025-11-25 20:14:46,631 | INFO     | process IDs to be killed: [2578883] (in reverse order)
[2025-11-25 15:15:19] 2025-11-25 20:14:46,877 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:15:19] 2025-11-25 20:14:46,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:15:19] 2025-11-25 20:14:46,926 | INFO     | did not find any defunct processes belonging to 2578883
[2025-11-25 15:15:19] 2025-11-25 20:14:46,968 | INFO     | did not find any defunct processes belonging to 2578883
[2025-11-25 15:15:19] 2025-11-25 20:14:46,973 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:15:19] 2025-11-25 20:14:46,974 | INFO     | ready for new job
[2025-11-25 15:15:19] 2025-11-25 20:14:46,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:15:19] 2025-11-25 20:14:46,983 | INFO     | ***************************************
[2025-11-25 15:15:19] 2025-11-25 20:14:46,983 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:15:19] 2025-11-25 20:14:46,983 | INFO     | ***************************************
[2025-11-25 15:15:19] 2025-11-25 20:14:46,983 | INFO     | 
[2025-11-25 15:15:19] 2025-11-25 20:14:46,997 | INFO     | architecture information:
[2025-11-25 15:15:19] 2025-11-25 20:14:47,001 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:15:19] 2025-11-25 20:14:47,078 | INFO     | cat /etc/os-release:
[2025-11-25 15:15:19] NAME="CentOS Linux"
[2025-11-25 15:15:19] VERSION="7 (Core)"
[2025-11-25 15:15:19] ID="centos"
[2025-11-25 15:15:19] ID_LIKE="rhel fedora"
[2025-11-25 15:15:19] VERSION_ID="7"
[2025-11-25 15:15:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:15:19] ANSI_COLOR="0;31"
[2025-11-25 15:15:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:15:19] HOME_URL="https://www.centos.org/"
[2025-11-25 15:15:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:15:19] 
[2025-11-25 15:15:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:15:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:15:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:15:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:15:19] 
[2025-11-25 15:15:19] 2025-11-25 20:14:47,079 | INFO     | ***************************************
[2025-11-25 15:15:19] 2025-11-25 20:14:47,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 15:15:19] 2025-11-25 20:14:47,625 | INFO     | sufficient remaining disk space (85812314112 B)
[2025-11-25 15:15:19] 2025-11-25 20:14:47,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:15:19] 2025-11-25 20:14:47,625 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:15:19] 2025-11-25 20:14:47,625 | INFO     | update_server=False
[2025-11-25 15:15:19] 2025-11-25 20:14:47,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:15:19] 2025-11-25 20:14:47,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:15:19] 2025-11-25 20:14:47,627 | INFO     | aborting loop
[2025-11-25 15:15:19] 2025-11-25 20:14:47,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:15:19] 2025-11-25 20:14:48,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:15:19] 2025-11-25 20:14:48,132 | INFO     | all data control threads have been joined
[2025-11-25 15:15:19] 2025-11-25 20:14:48,633 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:48,634 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:48,696 | INFO     | all job control threads have been joined
[2025-11-25 15:15:19] 2025-11-25 20:14:48,854 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:48,975 | INFO     | all payload control threads have been joined
[2025-11-25 15:15:19] 2025-11-25 20:14:49,140 | INFO     | [data] control thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,152 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,175 | INFO     | [job] validate thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,391 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,460 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:15:19] 2025-11-25 20:14:49,550 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,697 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,702 | INFO     | [job] control thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:49,981 | INFO     | [payload] control thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:50,059 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:50,161 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:50,531 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:14:52,050 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:15:19] 2025-11-25 20:15:01,942 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:15:19] 2025-11-25 20:15:03,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140299533227840)>', '<ExcThread(monitor, started 140299057751808)>']
[2025-11-25 15:15:19] 2025-11-25 20:15:08,032 | INFO     | all workflow threads have been joined
[2025-11-25 15:15:19] 2025-11-25 20:15:08,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:15:19] 2025-11-25 20:15:08,032 | INFO     | traces error code: 0
[2025-11-25 15:15:19] 2025-11-25 20:15:08,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:15:19] 2025-11-25 20:15:17,763 | INFO     | PID=2567503 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 15:15:19] 2025-11-25 20:15:17,766 | INFO     | .. there are 46 such processes running
[2025-11-25 15:15:19] 2025-11-25 20:15:17,770 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:15:19] 2025-11-25 20:15:17,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:15:19] 2025-11-25 20:15:17,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:15:19] 2025-11-25 20:15:17,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:15:19] 2025-11-25 20:15:17,770 | INFO     | [monitor] control thread has ended
[2025-11-25 15:15:19] 2025-11-25 20:15:18,109 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:15:19] 2025-11-25 20:15:18,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:15:19] 2025-11-25 20:15:18,115 [wrapper] pilotpid: 2567503
[2025-11-25 15:15:19] 2025-11-25 20:15:18,117 [wrapper] Pilot exit status: 0
[2025-11-25 15:15:19] 2025-11-25 20:15:18,206 [wrapper] pandaids: 6895361894
[2025-11-25 15:15:19] 2025-11-25 20:15:18,413 [wrapper] cleanup supervisor_pilot 2756099 2567504
[2025-11-25 15:15:19] 2025-11-25 20:15:18,425 [wrapper] Test setup, not cleaning
[2025-11-25 15:15:19] 2025-11-25 20:15:18,445 [wrapper] apfmon messages muted
[2025-11-25 15:15:19] 2025-11-25 20:15:18,460 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:15:19] 2025-11-25 20:15:18,506 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:15:19]  *** Error codes and diagnostics ***
[2025-11-25 15:15:19]     "exeErrorCode": 0,
[2025-11-25 15:15:19]     "exeErrorDiag": "",
[2025-11-25 15:15:19]     "pilotErrorCode": 0,
[2025-11-25 15:15:19]     "pilotErrorDiag": "",
[2025-11-25 15:15:19]  *** Listing of results directory ***
[2025-11-25 15:15:19] total 1331236
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 09:16 pilot3.tar.gz
[2025-11-25 15:15:19] -rwx------. 1 boincer umatlas     36292 Nov 23 09:41 runpilot2-wrapper.sh
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 09:41 queuedata.json
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas       100 Nov 24 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:15:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 18:52 run_atlas
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas       105 Nov 24 18:52 job.xml
[2025-11-25 15:15:19] -rw-r--r--. 2 boincer umatlas 409837341 Nov 24 18:52 EVNT.47483658._000768.pool.root.1
[2025-11-25 15:15:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:52 start_atlas.sh
[2025-11-25 15:15:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 18:52 shared
[2025-11-25 15:15:19] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 18:52 input.tar.gz
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas         0 Nov 24 18:52 boinc_lockfile
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 18:52 pandaJob.out
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas        57 Nov 24 18:52 setup.sh.local
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas    991801 Nov 24 18:53 agis_schedconf.cvmfs.json
[2025-11-25 15:15:19] drwx------. 5 boincer umatlas      4096 Nov 24 18:53 pilot3
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas       533 Nov 25 14:44 boinc_task_state.xml
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas 927825008 Nov 25 15:13 HITS.47556137._007632.pool.root.1
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas      6881 Nov 25 15:13 init_data.xml
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas      1064 Nov 25 15:14 memory_monitor_summary.json
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas   1516240 Nov 25 15:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas   2244675 Nov 25 15:14 log.47556137._007632.job.log.tgz.1
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas      8634 Nov 25 15:14 heartbeat.json
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas        29 Nov 25 15:15 wrapper_checkpoint.txt
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 15:15 boinc_mmap_file
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas        95 Nov 25 15:15 pilot_heartbeat.json
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas       823 Nov 25 15:15 pilotlog.txt
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas   8554044 Nov 25 15:15 log.47556137._007632.job.log.1
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas       353 Nov 25 15:15 output.list
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas       620 Nov 25 15:15 runtime_log
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas  10823680 Nov 25 15:15 result.tar.gz
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas       664 Nov 25 15:15 Vi1LDmxSQh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmyKKDmMvAorm.diag
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas      9353 Nov 25 15:15 runtime_log.err
[2025-11-25 15:15:19] -rw-r--r--. 1 boincer umatlas     21812 Nov 25 15:15 stderr.txt
[2025-11-25 15:15:19] HITS file was successfully produced:
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas 927825008 Nov 25 15:13 shared/HITS.pool.root.1
[2025-11-25 15:15:19]  *** Contents of shared directory: ***
[2025-11-25 15:15:19] total 1317488
[2025-11-25 15:15:19] -rw-r--r--. 2 boincer umatlas 409837341 Nov 24 18:52 ATLAS.root_0
[2025-11-25 15:15:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:52 start_atlas.sh
[2025-11-25 15:15:19] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 18:52 input.tar.gz
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas 927825008 Nov 25 15:13 HITS.pool.root.1
[2025-11-25 15:15:19] -rw-------. 1 boincer umatlas  10823680 Nov 25 15:15 result.tar.gz
15:15:20 (2558935): run_atlas exited; CPU time 261372.438972
15:15:20 (2558935): called boinc_finish(0)

</stderr_txt>
]]>

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