Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:14 (637622): wrapper (7.7.26015): starting
00:04:14 (637622): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:04:14] Arguments: --nthreads 12
[2025-11-25 00:04:14] Threads: 12
[2025-11-25 00:04:14] Checking for CVMFS
[2025-11-25 00:04:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:04:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:04:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:04:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:04:15] 2.13.3.0 12500 28166 252796 153270 2 686 27769559 32503809 47022 16776704 0 175729891 99.488 223235541 38483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:04:15] CVMFS is ok
[2025-11-25 00:04:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:04:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:04:15] Further information can be found at the LHC@home message board.
[2025-11-25 00:04:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:04:15] Checking for apptainer binary...
[2025-11-25 00:04:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:04:15] Running /usr/bin/apptainer --version
[2025-11-25 00:04:15] apptainer version 1.4.4-1.el9
[2025-11-25 00:04:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:04:16] c7-7-36.aglt2.org
[2025-11-25 00:04:16] apptainer works
[2025-11-25 00:04:16] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:04:16] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:04:16] Starting ATLAS job with PandaID=6895352848
[2025-11-25 00:04:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:12:21]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:12:21] 2025-11-25 18:03:50,125 | INFO     | monitor loop #2664: job 0:6895352848 is in state 'finished'
[2025-11-25 13:12:21] 2025-11-25 18:03:50,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,353 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 13:12:21] 2025-11-25 18:03:50,358 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3230.921177083333
[2025-11-25 13:12:21] 2025-11-25 18:03:50,391 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895352848/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,392 | INFO     | extracted standard info from prmon json
[2025-11-25 13:12:21] 2025-11-25 18:03:50,392 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:12:21] 2025-11-25 18:03:50,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:12:21] 2025-11-25 18:03:50,420 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:12:21] 2025-11-25 18:03:50,422 | INFO     | sum of square deviations: 138822204697.86145
[2025-11-25 13:12:21] 2025-11-25 18:03:50,434 | INFO     | sum of deviations: 3194630460685.734
[2025-11-25 13:12:21] 2025-11-25 18:03:50,435 | INFO     | mean x: 1764070458.15817
[2025-11-25 13:12:21] 2025-11-25 18:03:50,435 | INFO     | mean y: 3441424.2418300654
[2025-11-25 13:12:21] 2025-11-25 18:03:50,435 | INFO     | intersect: -40592032712.57501
[2025-11-25 13:12:21] 2025-11-25 18:03:50,436 | INFO     | chi2: 11.40063026744511
[2025-11-25 13:12:21] 2025-11-25 18:03:50,436 | INFO     | sum of square deviations: 136118200961.11055
[2025-11-25 13:12:21] 2025-11-25 18:03:50,448 | INFO     | sum of deviations: 3456719396329.902
[2025-11-25 13:12:21] 2025-11-25 18:03:50,448 | INFO     | mean x: 1764070305.6657894
[2025-11-25 13:12:21] 2025-11-25 18:03:50,449 | INFO     | mean y: 3456195.357894737
[2025-11-25 13:12:21] 2025-11-25 18:03:50,449 | INFO     | intersect: -44795079188.06774
[2025-11-25 13:12:21] 2025-11-25 18:03:50,449 | INFO     | chi2: 8.87258902970012
[2025-11-25 13:12:21] 2025-11-25 18:03:50,450 | INFO     | current chi2=8.87258902970012 (change=22.17457437387386 %)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,450 | INFO     | right removable region: 759
[2025-11-25 13:12:21] 2025-11-25 18:03:50,450 | INFO     | sum of square deviations: 136117660501.11061
[2025-11-25 13:12:21] 2025-11-25 18:03:50,468 | INFO     | sum of deviations: 2842141357942.468
[2025-11-25 13:12:21] 2025-11-25 18:03:50,469 | INFO     | mean x: 1764070610.6657894
[2025-11-25 13:12:21] 2025-11-25 18:03:50,469 | INFO     | mean y: 3461294.202631579
[2025-11-25 13:12:21] 2025-11-25 18:03:50,469 | INFO     | intersect: -36830392758.579575
[2025-11-25 13:12:21] 2025-11-25 18:03:50,470 | INFO     | chi2: 7.576272450733248
[2025-11-25 13:12:21] 2025-11-25 18:03:50,470 | INFO     | current chi2=7.576272450733248 (change=33.54514379465884 %)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,470 | INFO     | sum of square deviations: 133448465804.27036
[2025-11-25 13:12:21] 2025-11-25 18:03:50,482 | INFO     | sum of deviations: 2521737268983.4873
[2025-11-25 13:12:21] 2025-11-25 18:03:50,482 | INFO     | mean x: 1764070763.1735098
[2025-11-25 13:12:21] 2025-11-25 18:03:50,482 | INFO     | mean y: 3479592.034437086
[2025-11-25 13:12:21] 2025-11-25 18:03:50,482 | INFO     | intersect: -33331658146.77972
[2025-11-25 13:12:21] 2025-11-25 18:03:50,483 | INFO     | chi2: 4.553438831555176
[2025-11-25 13:12:21] 2025-11-25 18:03:50,483 | INFO     | current chi2=4.553438831555176 (change=39.89869211851689 %)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,484 | INFO     | sum of square deviations: 130814433857.20007
[2025-11-25 13:12:21] 2025-11-25 18:03:50,495 | INFO     | sum of deviations: 2313922469788.2783
[2025-11-25 13:12:21] 2025-11-25 18:03:50,495 | INFO     | mean x: 1764070915.68
[2025-11-25 13:12:21] 2025-11-25 18:03:50,495 | INFO     | mean y: 3491614.3386666668
[2025-11-25 13:12:21] 2025-11-25 18:03:50,496 | INFO     | intersect: -31200429923.46238
[2025-11-25 13:12:21] 2025-11-25 18:03:50,496 | INFO     | chi2: 3.44775447148651
[2025-11-25 13:12:21] 2025-11-25 18:03:50,496 | INFO     | current chi2=3.44775447148651 (change=24.28240283818706 %)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,496 | INFO     | left removable region: 30
[2025-11-25 13:12:21] 2025-11-25 18:03:50,497 | INFO     | sum of square deviations: 120131228820.73517
[2025-11-25 13:12:21] 2025-11-25 18:03:50,510 | INFO     | sum of deviations: 2323158872661.0127
[2025-11-25 13:12:21] 2025-11-25 18:03:50,514 | INFO     | mean x: 1764071190.1824417
[2025-11-25 13:12:21] 2025-11-25 18:03:50,514 | INFO     | mean y: 3525073.375857339
[2025-11-25 13:12:21] 2025-11-25 18:03:50,514 | INFO     | intersect: -34110981851.326824
[2025-11-25 13:12:21] 2025-11-25 18:03:50,515 | INFO     | chi2: 0.5104175857599244
[2025-11-25 13:12:21] 2025-11-25 18:03:50,515 | INFO     | current memory leak: 19.34 B/s (using 729 data points, chi2=0.51)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,516 | INFO     | could have reported an average CPU frequency of 3138 MHz (29 samples)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,516 | INFO     | ..............................
[2025-11-25 13:12:21] 2025-11-25 18:03:50,516 | INFO     | . Timing measurements:
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . get job = 0 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . initial setup = 3 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . payload setup = 19 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . stage-in = 0 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . payload execution = 46675 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . stage-out = 3 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | . log creation = 0 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,517 | INFO     | ..............................
[2025-11-25 13:12:21] 2025-11-25 18:03:50,683 | INFO     | 
[2025-11-25 13:12:21] 2025-11-25 18:03:50,683 | INFO     | job summary report
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | --------------------------------------------------
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | PanDA job id: 6895352848
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | task id: 47556137
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | errors: (none)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | pilot state: finished 
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | transexitcode: 0
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | exeerrorcode: 0
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | exeerrordiag: 
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | exitcode: 0
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | exitmsg: OK
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | cpuconsumptiontime: 204975 s
[2025-11-25 13:12:21] 2025-11-25 18:03:50,684 | INFO     | nevents: 1000
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | neventsw: 0
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | pid: 659516
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | pgrp: 659516
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | corecount: 12
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | event service: False
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | sizes: {0: 2283481, 1: 2284337, 2: 2284337, 13: 2284365, 16: 2284683, 24: 2284711, 46695: 2331275, 46699: 2340274, 46700: 2340330, 46708: 2340576}
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | --------------------------------------------------
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | 
[2025-11-25 13:12:21] 2025-11-25 18:03:50,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:12:21] 2025-11-25 18:03:50,731 | INFO     | job 6895352848 has completed (purged errors)
[2025-11-25 13:12:21] 2025-11-25 18:03:50,731 | INFO     | overall cleanup function is called
[2025-11-25 13:12:21] 2025-11-25 18:03:51,770 | INFO     | --- collectZombieJob: --- 10, [659516]
[2025-11-25 13:12:21] 2025-11-25 18:03:51,771 | INFO     | zombie collector waiting for pid 659516
[2025-11-25 13:12:21] 2025-11-25 18:03:51,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:12:21] 2025-11-25 18:03:51,771 | INFO     | collected zombie processes
[2025-11-25 13:12:21] 2025-11-25 18:03:51,771 | INFO     | will attempt to kill all subprocesses of pid=659516
[2025-11-25 13:12:21] 2025-11-25 18:03:53,170 | INFO     | process IDs to be killed: [659516] (in reverse order)
[2025-11-25 13:12:21] 2025-11-25 18:03:53,431 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:12:21] 2025-11-25 18:03:53,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:12:21] 2025-11-25 18:03:53,513 | INFO     | did not find any defunct processes belonging to 659516
[2025-11-25 13:12:21] 2025-11-25 18:03:53,551 | INFO     | did not find any defunct processes belonging to 659516
[2025-11-25 13:12:21] 2025-11-25 18:03:53,578 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:12:21] 2025-11-25 18:03:53,579 | INFO     | ready for new job
[2025-11-25 13:12:21] 2025-11-25 18:03:53,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:12:21] 2025-11-25 18:03:53,586 | INFO     | ***************************************
[2025-11-25 13:12:21] 2025-11-25 18:03:53,586 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:12:21] 2025-11-25 18:03:53,586 | INFO     | ***************************************
[2025-11-25 13:12:21] 2025-11-25 18:03:53,586 | INFO     | 
[2025-11-25 13:12:21] 2025-11-25 18:03:53,591 | INFO     | architecture information:
[2025-11-25 13:12:21] 2025-11-25 18:03:53,595 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:12:21] 2025-11-25 18:03:53,616 | INFO     | cat /etc/os-release:
[2025-11-25 13:12:21] NAME="CentOS Linux"
[2025-11-25 13:12:21] VERSION="7 (Core)"
[2025-11-25 13:12:21] ID="centos"
[2025-11-25 13:12:21] ID_LIKE="rhel fedora"
[2025-11-25 13:12:21] VERSION_ID="7"
[2025-11-25 13:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:12:21] ANSI_COLOR="0;31"
[2025-11-25 13:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:12:21] HOME_URL="https://www.centos.org/"
[2025-11-25 13:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:12:21] 
[2025-11-25 13:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:12:21] 
[2025-11-25 13:12:21] 2025-11-25 18:03:53,617 | INFO     | ***************************************
[2025-11-25 13:12:21] 2025-11-25 18:03:54,121 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 13:12:21] 2025-11-25 18:03:54,145 | INFO     | sufficient remaining disk space (85267054592 B)
[2025-11-25 13:12:21] 2025-11-25 18:03:54,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:12:21] 2025-11-25 18:03:54,146 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:12:21] 2025-11-25 18:03:54,146 | INFO     | update_server=False
[2025-11-25 13:12:21] 2025-11-25 18:03:54,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:12:21] 2025-11-25 18:03:54,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:12:21] 2025-11-25 18:03:54,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:12:21] 2025-11-25 18:03:54,156 | INFO     | aborting loop
[2025-11-25 13:12:21] 2025-11-25 18:03:54,191 | INFO     | all data control threads have been joined
[2025-11-25 13:12:21] 2025-11-25 18:03:55,158 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:55,161 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:55,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:12:21] 2025-11-25 18:03:55,197 | INFO     | [data] control thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:55,217 | INFO     | all payload control threads have been joined
[2025-11-25 13:12:21] 2025-11-25 18:03:55,378 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:55,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:12:21] 2025-11-25 18:03:55,757 | INFO     | all job control threads have been joined
[2025-11-25 13:12:21] 2025-11-25 18:03:55,813 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,039 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,095 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,222 | INFO     | [payload] control thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,283 | INFO     | [job] validate thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,484 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,638 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,722 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:56,763 | INFO     | [job] control thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:57,196 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:03:58,153 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:04:04,979 | INFO     | job.realtimelogging is not enabled
[2025-11-25 13:12:21] 2025-11-25 18:04:05,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:12:21] 2025-11-25 18:04:06,098 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:12:21] 2025-11-25 18:04:07,879 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034807363392)>', '<ExcThread(monitor, started 140034535560960)>']
[2025-11-25 13:12:21] 2025-11-25 18:04:12,905 | INFO     | all workflow threads have been joined
[2025-11-25 13:12:21] 2025-11-25 18:04:12,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:12:21] 2025-11-25 18:04:12,906 | INFO     | traces error code: 0
[2025-11-25 13:12:21] 2025-11-25 18:04:12,906 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:12:21] 2025-11-25 18:04:23,662 | INFO     | PID=643358 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:12:21] 2025-11-25 18:04:23,663 | INFO     | .. there are 75 such processes running
[2025-11-25 13:12:21] 2025-11-25 18:04:23,663 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:12:21] 2025-11-25 18:04:23,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:12:21] 2025-11-25 18:04:23,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:12:21] 2025-11-25 18:04:23,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:12:21] 2025-11-25 18:04:23,663 | INFO     | [monitor] control thread has ended
[2025-11-25 13:12:21] 2025-11-25 18:04:23,784 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:12:21] 2025-11-25 18:04:23,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:12:21] 2025-11-25 18:04:23,797 [wrapper] pilotpid: 643358
[2025-11-25 13:12:21] 2025-11-25 18:04:23,800 [wrapper] Pilot exit status: 0
[2025-11-25 13:12:21] 2025-11-25 18:04:23,815 [wrapper] pandaids: 6895352848
[2025-11-25 13:12:21] 2025-11-25 18:04:23,978 [wrapper] cleanup supervisor_pilot 1188974 643359
[2025-11-25 13:12:21] 2025-11-25 18:04:23,981 [wrapper] Test setup, not cleaning
[2025-11-25 13:12:21] 2025-11-25 18:04:23,983 [wrapper] apfmon messages muted
[2025-11-25 13:12:21] 2025-11-25 18:04:23,986 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:12:21] 2025-11-25 18:04:23,988 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:12:21]  *** Error codes and diagnostics ***
[2025-11-25 13:12:21]     "exeErrorCode": 0,
[2025-11-25 13:12:21]     "exeErrorDiag": "",
[2025-11-25 13:12:21]     "pilotErrorCode": 0,
[2025-11-25 13:12:21]     "pilotErrorDiag": "",
[2025-11-25 13:12:21]  *** Listing of results directory ***
[2025-11-25 13:12:21] total 1326936
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 22:47 pilot3.tar.gz
[2025-11-25 13:12:21] -rwx------. 1 boincer umatlas     36292 Nov 22 23:18 runpilot2-wrapper.sh
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 23:18 queuedata.json
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:12:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-25 13:12:21] -rw-r--r--. 2 boincer umatlas 411660559 Nov 25 00:04 EVNT.47483658._000606.pool.root.1
[2025-11-25 13:12:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-25 13:12:21] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 00:04 input.tar.gz
[2025-11-25 13:12:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:04 pandaJob.out
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas        57 Nov 25 00:04 setup.sh.local
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 13:12:21] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas       533 Nov 25 12:55 boinc_task_state.xml
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas 926898719 Nov 25 13:03 HITS.47556137._006020.pool.root.1
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas        95 Nov 25 13:03 pilot_heartbeat.json
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas      1074 Nov 25 13:03 memory_monitor_summary.json
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas   1516240 Nov 25 13:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas   2411290 Nov 25 13:03 log.47556137._006020.job.log.tgz.1
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas      8652 Nov 25 13:03 heartbeat.json
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas       823 Nov 25 13:04 pilotlog.txt
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas   5742184 Nov 25 13:04 log.47556137._006020.job.log.1
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas       353 Nov 25 13:04 output.list
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas       620 Nov 25 13:04 runtime_log
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas   8171520 Nov 25 13:04 result.tar.gz
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas      9340 Nov 25 13:04 runtime_log.err
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas       665 Nov 25 13:04 KGNNDmDjGh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnQIKDmyEb3rm.diag
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas      6949 Nov 25 13:12 init_data.xml
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 13:12 boinc_mmap_file
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas        29 Nov 25 13:12 wrapper_checkpoint.txt
[2025-11-25 13:12:21] -rw-r--r--. 1 boincer umatlas     21323 Nov 25 13:12 stderr.txt
[2025-11-25 13:12:21] HITS file was successfully produced:
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas 926898719 Nov 25 13:03 shared/HITS.pool.root.1
[2025-11-25 13:12:21]  *** Contents of shared directory: ***
[2025-11-25 13:12:21] total 1315776
[2025-11-25 13:12:21] -rw-r--r--. 2 boincer umatlas 411660559 Nov 25 00:04 ATLAS.root_0
[2025-11-25 13:12:21] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 00:04 input.tar.gz
[2025-11-25 13:12:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas 926898719 Nov 25 13:03 HITS.pool.root.1
[2025-11-25 13:12:21] -rw-------. 1 boincer umatlas   8171520 Nov 25 13:04 result.tar.gz
13:12:23 (637622): run_atlas exited; CPU time 204788.559639
13:12:23 (637622): called boinc_finish(0)

</stderr_txt>
]]>

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