Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:17 (1743824): wrapper (7.7.26015): starting
00:03:17 (1743824): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:03:17] Arguments: --nthreads 8
[2025-11-25 00:03:17] Threads: 8
[2025-11-25 00:03:17] Checking for CVMFS
[2025-11-25 00:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:20] 2.13.3.0 11334 28165 342704 153270 3 407 24876548 32935937 35829 16776704 0 119193176 99.500 161302145 40930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:20] CVMFS is ok
[2025-11-25 00:03:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:20] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:20] Checking for apptainer binary...
[2025-11-25 00:03:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:20] Running /usr/bin/apptainer --version
[2025-11-25 00:03:20] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:21] c6-4-5-2.aglt2.org
[2025-11-25 00:03:21] apptainer works
[2025-11-25 00:03:21] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:03:21] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:03:21] Starting ATLAS job with PandaID=6895351239
[2025-11-25 00:03:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:11:06]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:11:06] 2025-11-26 03:10:15,910 | INFO     | monitor loop #4818: job 0:6895351239 is in state 'finished'
[2025-11-25 22:11:06] 2025-11-26 03:10:15,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:11:06] 2025-11-26 03:10:17,067 | INFO     | time since job start (79543s) is within the limit (172800.0s)
[2025-11-25 22:11:06] 2025-11-26 03:10:17,760 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 22:11:06] 2025-11-26 03:10:17,769 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3134.532609374999
[2025-11-25 22:11:06] 2025-11-26 03:10:17,779 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6895351239/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:11:06] 2025-11-26 03:10:17,780 | INFO     | extracted standard info from prmon json
[2025-11-25 22:11:06] 2025-11-26 03:10:17,780 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:11:06] 2025-11-26 03:10:17,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:11:06] 2025-11-26 03:10:17,799 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:11:06] 2025-11-26 03:10:17,801 | INFO     | sum of square deviations: 682648661770.996
[2025-11-25 22:11:06] 2025-11-26 03:10:17,850 | INFO     | sum of deviations: 5435232745790.951
[2025-11-25 22:11:06] 2025-11-26 03:10:17,851 | INFO     | mean x: 1764086898.5887778
[2025-11-25 22:11:06] 2025-11-26 03:10:17,851 | INFO     | mean y: 2812968.9008455034
[2025-11-25 22:11:06] 2025-11-26 03:10:17,851 | INFO     | intersect: -14042805831.19435
[2025-11-25 22:11:06] 2025-11-26 03:10:17,852 | INFO     | chi2: 16.761486098871373
[2025-11-25 22:11:06] 2025-11-26 03:10:17,854 | INFO     | sum of square deviations: 674807594521.3517
[2025-11-25 22:11:06] 2025-11-26 03:10:17,886 | INFO     | sum of deviations: 5870299551128.094
[2025-11-25 22:11:06] 2025-11-26 03:10:17,886 | INFO     | mean x: 1764086746.1026235
[2025-11-25 22:11:06] 2025-11-26 03:10:17,886 | INFO     | mean y: 2821429.029320988
[2025-11-25 22:11:06] 2025-11-26 03:10:17,886 | INFO     | intersect: -15343356826.629868
[2025-11-25 22:11:06] 2025-11-26 03:10:17,888 | INFO     | chi2: 13.378511390595152
[2025-11-25 22:11:06] 2025-11-26 03:10:17,888 | INFO     | current chi2=13.378511390595152 (change=20.183023678932692 %)
[2025-11-25 22:11:06] 2025-11-26 03:10:17,888 | INFO     | right removable region: 1295
[2025-11-25 22:11:06] 2025-11-26 03:10:17,889 | INFO     | sum of square deviations: 674804904919.7588
[2025-11-25 22:11:06] 2025-11-26 03:10:17,917 | INFO     | sum of deviations: 4915319715293.169
[2025-11-25 22:11:06] 2025-11-26 03:10:17,917 | INFO     | mean x: 1764087051.1010802
[2025-11-25 22:11:06] 2025-11-26 03:10:17,917 | INFO     | mean y: 2823076.739197531
[2025-11-25 22:11:06] 2025-11-26 03:10:17,917 | INFO     | intersect: -12846893631.828007
[2025-11-25 22:11:06] 2025-11-26 03:10:17,920 | INFO     | chi2: 12.469883434993221
[2025-11-25 22:11:06] 2025-11-26 03:10:17,920 | INFO     | current chi2=12.469883434993221 (change=25.603950858313958 %)
[2025-11-25 22:11:06] 2025-11-26 03:10:17,921 | INFO     | sum of square deviations: 667021270389.6687
[2025-11-25 22:11:06] 2025-11-26 03:10:18,039 | INFO     | sum of deviations: 4461171726420.812
[2025-11-25 22:11:06] 2025-11-26 03:10:18,039 | INFO     | mean x: 1764087203.6150272
[2025-11-25 22:11:06] 2025-11-26 03:10:18,039 | INFO     | mean y: 2831974.412083656
[2025-11-25 22:11:06] 2025-11-26 03:10:18,039 | INFO     | intersect: -11795736234.830448
[2025-11-25 22:11:06] 2025-11-26 03:10:18,057 | INFO     | chi2: 9.346698530538617
[2025-11-25 22:11:06] 2025-11-26 03:10:18,057 | INFO     | current chi2=9.346698530538617 (change=25.045822767599123 %)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,059 | INFO     | sum of square deviations: 659297997789.5924
[2025-11-25 22:11:06] 2025-11-26 03:10:18,280 | INFO     | sum of deviations: 4244785911100.0967
[2025-11-25 22:11:06] 2025-11-26 03:10:18,280 | INFO     | mean x: 1764087356.125972
[2025-11-25 22:11:06] 2025-11-26 03:10:18,280 | INFO     | mean y: 2836243.5178849143
[2025-11-25 22:11:06] 2025-11-26 03:10:18,280 | INFO     | intersect: -11354961262.827814
[2025-11-25 22:11:06] 2025-11-26 03:10:18,282 | INFO     | chi2: 8.683882077934978
[2025-11-25 22:11:06] 2025-11-26 03:10:18,282 | INFO     | current chi2=8.683882077934978 (change=7.091449996359768 %)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,282 | INFO     | left removable region: 30
[2025-11-25 22:11:06] 2025-11-26 03:10:18,283 | INFO     | sum of square deviations: 627522406316.2454
[2025-11-25 22:11:06] 2025-11-26 03:10:18,357 | INFO     | sum of deviations: 4514229620250.784
[2025-11-25 22:11:06] 2025-11-26 03:10:18,357 | INFO     | mean x: 1764087630.5889328
[2025-11-25 22:11:06] 2025-11-26 03:10:18,357 | INFO     | mean y: 2852218.984189723
[2025-11-25 22:11:06] 2025-11-26 03:10:18,362 | INFO     | intersect: -12687525932.563932
[2025-11-25 22:11:06] 2025-11-26 03:10:18,364 | INFO     | chi2: 4.338156596092275
[2025-11-25 22:11:06] 2025-11-26 03:10:18,364 | INFO     | current memory leak: 7.19 B/s (using 1265 data points, chi2=4.34)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,365 | INFO     | could have reported an average CPU frequency of 3152 MHz (47 samples)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,365 | INFO     | ..............................
[2025-11-25 22:11:06] 2025-11-26 03:10:18,365 | INFO     | . Timing measurements:
[2025-11-25 22:11:06] 2025-11-26 03:10:18,365 | INFO     | . get job = 0 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,365 | INFO     | . initial setup = 3 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,367 | INFO     | . payload setup = 47 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,367 | INFO     | . stage-in = 0 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,368 | INFO     | . payload execution = 79383 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,368 | INFO     | . stage-out = 5 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,368 | INFO     | . log creation = 1 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,368 | INFO     | ..............................
[2025-11-25 22:11:06] 2025-11-26 03:10:18,671 | INFO     | 
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | job summary report
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | --------------------------------------------------
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | PanDA job id: 6895351239
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | task id: 47556137
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | errors: (none)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | pilot state: finished 
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | transexitcode: 0
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | exeerrorcode: 0
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | exeerrordiag: 
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | exitcode: 0
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | exitmsg: OK
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | cpuconsumptiontime: 224840 s
[2025-11-25 22:11:06] 2025-11-26 03:10:18,672 | INFO     | nevents: 1000
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | neventsw: 0
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | pid: 1770001
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | pgrp: 1770001
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | corecount: 8
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | event service: False
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | sizes: {0: 2283431, 1: 2284032, 2: 2284116, 3: 2284172, 4: 2284371, 15: 2284371, 25: 2284527, 36: 2284555, 42: 2284845, 47: 2284901, 79434: 2347427, 79435: 2347706
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | --------------------------------------------------
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | 
[2025-11-25 22:11:06] 2025-11-26 03:10:18,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-25 22:11:06] 2025-11-26 03:10:18,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:11:06] 2025-11-26 03:10:18,736 | INFO     | job 6895351239 has completed (purged errors)
[2025-11-25 22:11:06] 2025-11-26 03:10:18,736 | INFO     | overall cleanup function is called
[2025-11-25 22:11:06] 2025-11-26 03:10:19,908 | INFO     | --- collectZombieJob: --- 10, [1770001]
[2025-11-25 22:11:06] 2025-11-26 03:10:19,908 | INFO     | zombie collector waiting for pid 1770001
[2025-11-25 22:11:06] 2025-11-26 03:10:19,908 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:11:06] 2025-11-26 03:10:19,908 | INFO     | collected zombie processes
[2025-11-25 22:11:06] 2025-11-26 03:10:19,908 | INFO     | will attempt to kill all subprocesses of pid=1770001
[2025-11-25 22:11:06] 2025-11-26 03:10:21,138 | INFO     | process IDs to be killed: [1770001] (in reverse order)
[2025-11-25 22:11:06] 2025-11-26 03:10:21,397 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:11:06] 2025-11-26 03:10:21,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:11:06] 2025-11-26 03:10:21,428 | INFO     | did not find any defunct processes belonging to 1770001
[2025-11-25 22:11:06] 2025-11-26 03:10:21,459 | INFO     | did not find any defunct processes belonging to 1770001
[2025-11-25 22:11:06] 2025-11-26 03:10:21,464 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:11:06] 2025-11-26 03:10:21,464 | INFO     | ready for new job
[2025-11-25 22:11:06] 2025-11-26 03:10:21,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:11:06] 2025-11-26 03:10:21,471 | INFO     | ***************************************
[2025-11-25 22:11:06] 2025-11-26 03:10:21,478 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:11:06] 2025-11-26 03:10:21,478 | INFO     | ***************************************
[2025-11-25 22:11:06] 2025-11-26 03:10:21,478 | INFO     | 
[2025-11-25 22:11:06] 2025-11-26 03:10:21,485 | INFO     | architecture information:
[2025-11-25 22:11:06] 2025-11-26 03:10:21,489 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:11:06] 2025-11-26 03:10:21,550 | INFO     | cat /etc/os-release:
[2025-11-25 22:11:06] NAME="CentOS Linux"
[2025-11-25 22:11:06] VERSION="7 (Core)"
[2025-11-25 22:11:06] ID="centos"
[2025-11-25 22:11:06] ID_LIKE="rhel fedora"
[2025-11-25 22:11:06] VERSION_ID="7"
[2025-11-25 22:11:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:11:06] ANSI_COLOR="0;31"
[2025-11-25 22:11:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:11:06] HOME_URL="https://www.centos.org/"
[2025-11-25 22:11:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:11:06] 
[2025-11-25 22:11:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:11:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:11:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:11:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:11:06] 
[2025-11-25 22:11:06] 2025-11-26 03:10:21,550 | INFO     | ***************************************
[2025-11-25 22:11:06] 2025-11-26 03:10:22,054 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-25 22:11:06] 2025-11-26 03:10:22,120 | INFO     | sufficient remaining disk space (68692213760 B)
[2025-11-25 22:11:06] 2025-11-26 03:10:22,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:11:06] 2025-11-26 03:10:22,121 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:11:06] 2025-11-26 03:10:22,121 | INFO     | update_server=False
[2025-11-25 22:11:06] 2025-11-26 03:10:22,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:11:06] 2025-11-26 03:10:22,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:11:06] 2025-11-26 03:10:22,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:11:06] 2025-11-26 03:10:22,122 | INFO     | aborting loop
[2025-11-25 22:11:06] 2025-11-26 03:10:22,174 | INFO     | all payload control threads have been joined
[2025-11-25 22:11:06] 2025-11-26 03:10:22,174 | INFO     | all job control threads have been joined
[2025-11-25 22:11:06] 2025-11-26 03:10:23,126 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:23,128 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:23,171 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:23,180 | INFO     | [payload] control thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:23,180 | INFO     | [job] control thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:23,206 | INFO     | all data control threads have been joined
[2025-11-25 22:11:06] 2025-11-26 03:10:23,425 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:23,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:11:06] 2025-11-26 03:10:23,902 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,133 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,212 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,212 | INFO     | [data] control thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,282 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,282 | INFO     | [job] validate thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,428 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,701 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:24,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:11:06] 2025-11-26 03:10:28,888 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:11:06] 2025-11-26 03:10:50,840 | INFO     | PID=1752415 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:11:06] 2025-11-26 03:10:50,840 | INFO     | .. there are 46 such processes running
[2025-11-25 22:11:06] 2025-11-26 03:10:50,840 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:11:06] 2025-11-26 03:10:50,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:11:06] 2025-11-26 03:10:50,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:11:06] 2025-11-26 03:10:59,591 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:11:06] 2025-11-26 03:11:00,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675894634304)>', '<ExcThread(monitor, started 139675255682816)>']
[2025-11-25 22:11:06] 2025-11-26 03:11:00,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:11:06] 2025-11-26 03:11:00,927 | INFO     | [monitor] control thread has ended
[2025-11-25 22:11:06] 2025-11-26 03:11:05,474 | INFO     | all workflow threads have been joined
[2025-11-25 22:11:06] 2025-11-26 03:11:05,474 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:11:06] 2025-11-26 03:11:05,474 | INFO     | traces error code: 0
[2025-11-25 22:11:06] 2025-11-26 03:11:05,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:11:06] 2025-11-26 03:11:05,654 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:11:06] 2025-11-26 03:11:05,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:11:06] 2025-11-26 03:11:05,690 [wrapper] pilotpid: 1752415
[2025-11-25 22:11:06] 2025-11-26 03:11:05,709 [wrapper] Pilot exit status: 0
[2025-11-25 22:11:06] 2025-11-26 03:11:05,804 [wrapper] pandaids: 6895351239
[2025-11-25 22:11:06] 2025-11-26 03:11:06,001 [wrapper] cleanup supervisor_pilot 3786163 1752416
[2025-11-25 22:11:06] 2025-11-26 03:11:06,037 [wrapper] Test setup, not cleaning
[2025-11-25 22:11:06] 2025-11-26 03:11:06,052 [wrapper] apfmon messages muted
[2025-11-25 22:11:06] 2025-11-26 03:11:06,068 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:11:06] 2025-11-26 03:11:06,083 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:11:06]  *** Error codes and diagnostics ***
[2025-11-25 22:11:06]     "exeErrorCode": 0,
[2025-11-25 22:11:06]     "exeErrorDiag": "",
[2025-11-25 22:11:06]     "pilotErrorCode": 0,
[2025-11-25 22:11:06]     "pilotErrorDiag": "",
[2025-11-25 22:11:06]  *** Listing of results directory ***
[2025-11-25 22:11:06] total 1319696
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 18:50 queuedata.json
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 18:50 pilot3.tar.gz
[2025-11-25 22:11:06] -rwx------. 1 boincer umatlas     36292 Nov 22 18:50 runpilot2-wrapper.sh
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:11:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 22:11:06] -rw-r--r--. 2 boincer umatlas 407514142 Nov 25 00:03 EVNT.47483658._000542.pool.root.1
[2025-11-25 22:11:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 22:11:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 22:11:06] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 00:03 input.tar.gz
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 22:11:06] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas       533 Nov 25 21:51 boinc_task_state.xml
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas 915003595 Nov 25 22:09 HITS.47556137._005377.pool.root.1
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas      6876 Nov 25 22:09 init_data.xml
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas      1063 Nov 25 22:09 memory_monitor_summary.json
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas   1516240 Nov 25 22:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas   2367633 Nov 25 22:09 log.47556137._005377.job.log.tgz.1
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas        95 Nov 25 22:10 pilot_heartbeat.json
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas      8622 Nov 25 22:10 heartbeat.json
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas        29 Nov 25 22:11 wrapper_checkpoint.txt
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 22:11 boinc_mmap_file
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas      4824 Nov 25 22:11 pilotlog.txt
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas  10092986 Nov 25 22:11 log.47556137._005377.job.log.1
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas       353 Nov 25 22:11 output.list
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas       620 Nov 25 22:11 runtime_log
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas  12482560 Nov 25 22:11 result.tar.gz
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 22:11 runtime_log.err
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas       660 Nov 25 22:11 dufMDmOYCh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnSKKDmKHJgTn.diag
[2025-11-25 22:11:06] -rw-r--r--. 1 boincer umatlas     21386 Nov 25 22:11 stderr.txt
[2025-11-25 22:11:06] HITS file was successfully produced:
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas 915003595 Nov 25 22:09 shared/HITS.pool.root.1
[2025-11-25 22:11:06]  *** Contents of shared directory: ***
[2025-11-25 22:11:06] total 1304320
[2025-11-25 22:11:06] -rw-r--r--. 2 boincer umatlas 407514142 Nov 25 00:03 ATLAS.root_0
[2025-11-25 22:11:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 22:11:06] -rw-r--r--. 2 boincer umatlas    590098 Nov 25 00:03 input.tar.gz
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas 915003595 Nov 25 22:09 HITS.pool.root.1
[2025-11-25 22:11:06] -rw-------. 1 boincer umatlas  12482560 Nov 25 22:11 result.tar.gz
22:11:08 (1743824): run_atlas exited; CPU time 226890.688597
22:11:08 (1743824): called boinc_finish(0)

</stderr_txt>
]]>

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