Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:30:28 (1501143): wrapper (7.7.26015): starting
18:30:28 (1501143): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 18:30:28] Arguments: --nthreads 8
[2025-11-24 18:30:28] Threads: 8
[2025-11-24 18:30:28] Checking for CVMFS
[2025-11-24 18:30:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:30:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:30:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:30:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:30:29] 2.13.2.0 5195 34347 161628 153263 3 209 35723469 40960001 22276 16776704 0 65260021 99.767 35288712 37727 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 18:30:29] CVMFS is ok
[2025-11-24 18:30:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:30:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:30:29] Further information can be found at the LHC@home message board.
[2025-11-24 18:30:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:30:29] Checking for apptainer binary...
[2025-11-24 18:30:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:30:29] Running /usr/bin/apptainer --version
[2025-11-24 18:30:29] apptainer version 1.4.4-1.el9
[2025-11-24 18:30:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:30:29] c-212-19.aglt2.org
[2025-11-24 18:30:29] apptainer works
[2025-11-24 18:30:29] Set ATHENA_PROC_NUMBER=8
[2025-11-24 18:30:29] Set ATHENA_CORE_NUMBER=8
[2025-11-24 18:30:29] Starting ATLAS job with PandaID=6893883521
[2025-11-24 18:30:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 03:38:27]  *** The last 200 lines of the pilot log: ***
[2025-11-26 03:38:27] 2025-11-26 08:37:07,877 | INFO     | monitor loop #7532: job 0:6893883521 is in state 'finished'
[2025-11-26 03:38:27] 2025-11-26 08:37:07,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:38:27] 2025-11-26 08:37:09,743 | INFO     | PID=1505693 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 03:38:27] 2025-11-26 08:37:09,743 | INFO     | .. there are 21 such processes running
[2025-11-26 03:38:27] 2025-11-26 08:37:10,387 | INFO     | monitor loop #7533: job 0:6893883521 is in state 'finished'
[2025-11-26 03:38:27] 2025-11-26 08:37:10,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:38:27] 2025-11-26 08:37:10,744 | INFO     | time since job start (119184s) is within the limit (172800.0s)
[2025-11-26 03:38:27] 2025-11-26 08:37:12,753 | INFO     | time since job start (119186s) is within the limit (172800.0s)
[2025-11-26 03:38:27] 2025-11-26 08:37:12,892 | INFO     | monitor loop #7534: job 0:6893883521 is in state 'finished'
[2025-11-26 03:38:27] 2025-11-26 08:37:12,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:38:27] 2025-11-26 08:37:14,760 | INFO     | time since job start (119188s) is within the limit (172800.0s)
[2025-11-26 03:38:27] 2025-11-26 08:37:15,397 | INFO     | monitor loop #7535: job 0:6893883521 is in state 'finished'
[2025-11-26 03:38:27] 2025-11-26 08:37:15,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:38:27] 2025-11-26 08:37:16,767 | INFO     | time since job start (119190s) is within the limit (172800.0s)
[2025-11-26 03:38:27] 2025-11-26 08:37:17,649 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 03:38:27] 2025-11-26 08:37:17,709 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3185.0341354166667
[2025-11-26 03:38:27] 2025-11-26 08:37:17,728 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893883521/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 03:38:27] 2025-11-26 08:37:17,728 | INFO     | extracted standard info from prmon json
[2025-11-26 03:38:27] 2025-11-26 08:37:17,728 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 03:38:27] 2025-11-26 08:37:17,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 03:38:27] 2025-11-26 08:37:17,755 | INFO     | fitting pss+swap vs Time
[2025-11-26 03:38:27] 2025-11-26 08:37:17,756 | INFO     | sum of square deviations: 2309873021409.217
[2025-11-26 03:38:27] 2025-11-26 08:37:17,833 | INFO     | sum of deviations: 10274169942312.697
[2025-11-26 03:38:27] 2025-11-26 08:37:17,836 | INFO     | mean x: 1764086620.0809011
[2025-11-26 03:38:27] 2025-11-26 08:37:17,836 | INFO     | mean y: 2946633.9257552484
[2025-11-26 03:38:27] 2025-11-26 08:37:17,836 | INFO     | intersect: -7843599717.186527
[2025-11-26 03:38:27] 2025-11-26 08:37:17,838 | INFO     | chi2: 19.383722764157376
[2025-11-26 03:38:27] 2025-11-26 08:37:17,859 | INFO     | sum of square deviations: 2292178803542.512
[2025-11-26 03:38:27] 2025-11-26 08:37:17,915 | INFO     | monitor loop #7536: job 0:6893883521 is in state 'finished'
[2025-11-26 03:38:27] 2025-11-26 08:37:17,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 03:38:27] 2025-11-26 08:37:17,980 | INFO     | sum of deviations: 10918735451879.904
[2025-11-26 03:38:27] 2025-11-26 08:37:17,980 | INFO     | mean x: 1764086467.5862422
[2025-11-26 03:38:27] 2025-11-26 08:37:17,980 | INFO     | mean y: 2952189.161190965
[2025-11-26 03:38:27] 2025-11-26 08:37:17,980 | INFO     | intersect: -8400228847.172938
[2025-11-26 03:38:27] 2025-11-26 08:37:17,982 | INFO     | chi2: 16.270456228235254
[2025-11-26 03:38:27] 2025-11-26 08:37:17,982 | INFO     | current chi2=16.270456228235254 (change=16.06124155716307 %)
[2025-11-26 03:38:27] 2025-11-26 08:37:17,982 | INFO     | right removable region: 1947
[2025-11-26 03:38:27] 2025-11-26 08:37:17,984 | INFO     | sum of square deviations: 2292176324502.5093
[2025-11-26 03:38:27] 2025-11-26 08:37:18,129 | INFO     | sum of deviations: 9609510877908.682
[2025-11-26 03:38:27] 2025-11-26 08:37:18,136 | INFO     | mean x: 1764086772.5862422
[2025-11-26 03:38:27] 2025-11-26 08:37:18,136 | INFO     | mean y: 2952360.1001026696
[2025-11-26 03:38:27] 2025-11-26 08:37:18,136 | INFO     | intersect: -7392644064.804754
[2025-11-26 03:38:27] 2025-11-26 08:37:18,137 | INFO     | chi2: 16.630659483212813
[2025-11-26 03:38:27] 2025-11-26 08:37:18,138 | INFO     | current chi2=16.630659483212813 (change=14.202964592721464 %)
[2025-11-26 03:38:27] 2025-11-26 08:37:18,138 | INFO     | left removable region: 10
[2025-11-26 03:38:27] 2025-11-26 08:37:18,139 | INFO     | sum of square deviations: 2253565883604.5195
[2025-11-26 03:38:27] 2025-11-26 08:37:18,338 | INFO     | sum of deviations: 10241160165117.336
[2025-11-26 03:38:27] 2025-11-26 08:37:18,338 | INFO     | mean x: 1764086742.0949922
[2025-11-26 03:38:27] 2025-11-26 08:37:18,338 | INFO     | mean y: 2960584.9220443987
[2025-11-26 03:38:27] 2025-11-26 08:37:18,338 | INFO     | intersect: -8013798544.417582
[2025-11-26 03:38:27] 2025-11-26 08:37:18,348 | INFO     | chi2: 12.708257265651625
[2025-11-26 03:38:27] 2025-11-26 08:37:18,348 | INFO     | current memory leak: 4.54 B/s (using 1937 data points, chi2=12.71)
[2025-11-26 03:38:27] 2025-11-26 08:37:18,350 | INFO     | could have reported an average CPU frequency of 3130 MHz (69 samples)
[2025-11-26 03:38:27] 2025-11-26 08:37:18,350 | INFO     | ..............................
[2025-11-26 03:38:27] 2025-11-26 08:37:18,350 | INFO     | . Timing measurements:
[2025-11-26 03:38:27] 2025-11-26 08:37:18,350 | INFO     | . get job = 0 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | . initial setup = 2 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | . payload setup = 10 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | . stage-in = 0 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | . payload execution = 119134 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | . stage-out = 6 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | . log creation = 2 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,356 | INFO     | ..............................
[2025-11-26 03:38:27] 2025-11-26 08:37:18,555 | INFO     | 
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | job summary report
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | --------------------------------------------------
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | PanDA job id: 6893883521
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | task id: 47523449
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | errors: (none)
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | pilot state: finished 
[2025-11-26 03:38:27] 2025-11-26 08:37:18,556 | INFO     | transexitcode: 0
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | exeerrorcode: 0
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | exeerrordiag: 
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | exitcode: 0
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | exitmsg: OK
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | cpuconsumptiontime: 213110 s
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | nevents: 1000
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | neventsw: 0
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | pid: 1514114
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | pgrp: 1514114
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | corecount: 8
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | event service: False
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | sizes: {0: 2284309, 1: 2284337, 9: 2284599, 11: 2284627, 119149: 2365735, 119157: 2374946, 119176: 2375136}
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | --------------------------------------------------
[2025-11-26 03:38:27] 2025-11-26 08:37:18,557 | INFO     | 
[2025-11-26 03:38:27] 2025-11-26 08:37:18,575 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 03:38:27] 2025-11-26 08:37:18,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,773 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 03:38:27] 2025-11-26 08:37:18,785 | INFO     | job 6893883521 has completed (purged errors)
[2025-11-26 03:38:27] 2025-11-26 08:37:18,786 | INFO     | overall cleanup function is called
[2025-11-26 03:38:27] 2025-11-26 08:37:18,784 | INFO     | time since job start (119192s) is within the limit (172800.0s)
[2025-11-26 03:38:27] 2025-11-26 08:37:19,811 | INFO     | --- collectZombieJob: --- 10, [1514114]
[2025-11-26 03:38:27] 2025-11-26 08:37:19,812 | INFO     | zombie collector waiting for pid 1514114
[2025-11-26 03:38:27] 2025-11-26 08:37:19,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 03:38:27] 2025-11-26 08:37:19,812 | INFO     | collected zombie processes
[2025-11-26 03:38:27] 2025-11-26 08:37:19,812 | INFO     | will attempt to kill all subprocesses of pid=1514114
[2025-11-26 03:38:27] 2025-11-26 08:37:20,960 | INFO     | process IDs to be killed: [1514114] (in reverse order)
[2025-11-26 03:38:27] 2025-11-26 08:37:21,108 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 03:38:27] 2025-11-26 08:37:21,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 03:38:27] 2025-11-26 08:37:21,146 | INFO     | did not find any defunct processes belonging to 1514114
[2025-11-26 03:38:27] 2025-11-26 08:37:21,162 | INFO     | did not find any defunct processes belonging to 1514114
[2025-11-26 03:38:27] 2025-11-26 08:37:21,163 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 03:38:27] 2025-11-26 08:37:21,164 | INFO     | ready for new job
[2025-11-26 03:38:27] 2025-11-26 08:37:21,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 03:38:27] 2025-11-26 08:37:21,171 | INFO     | ***************************************
[2025-11-26 03:38:27] 2025-11-26 08:37:21,171 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 03:38:27] 2025-11-26 08:37:21,171 | INFO     | ***************************************
[2025-11-26 03:38:27] 2025-11-26 08:37:21,171 | INFO     | 
[2025-11-26 03:38:27] 2025-11-26 08:37:21,176 | INFO     | architecture information:
[2025-11-26 03:38:27] 2025-11-26 08:37:21,176 | INFO     | executing command: cat /etc/os-release
[2025-11-26 03:38:27] 2025-11-26 08:37:21,193 | INFO     | cat /etc/os-release:
[2025-11-26 03:38:27] NAME="CentOS Linux"
[2025-11-26 03:38:27] VERSION="7 (Core)"
[2025-11-26 03:38:27] ID="centos"
[2025-11-26 03:38:27] ID_LIKE="rhel fedora"
[2025-11-26 03:38:27] VERSION_ID="7"
[2025-11-26 03:38:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 03:38:27] ANSI_COLOR="0;31"
[2025-11-26 03:38:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 03:38:27] HOME_URL="https://www.centos.org/"
[2025-11-26 03:38:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 03:38:27] 
[2025-11-26 03:38:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 03:38:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 03:38:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 03:38:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 03:38:27] 
[2025-11-26 03:38:27] 2025-11-26 08:37:21,193 | INFO     | ***************************************
[2025-11-26 03:38:27] 2025-11-26 08:37:21,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 03:38:27] 2025-11-26 08:37:21,881 | INFO     | sufficient remaining disk space (119680270336 B)
[2025-11-26 03:38:27] 2025-11-26 08:37:21,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 03:38:27] 2025-11-26 08:37:21,881 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 03:38:27] 2025-11-26 08:37:21,882 | INFO     | update_server=False
[2025-11-26 03:38:27] 2025-11-26 08:37:21,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 03:38:27] 2025-11-26 08:37:21,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:38:27] 2025-11-26 08:37:21,883 | INFO     | aborting loop
[2025-11-26 03:38:27] 2025-11-26 08:37:22,079 | INFO     | all job control threads have been joined
[2025-11-26 03:38:27] 2025-11-26 08:37:22,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 03:38:27] 2025-11-26 08:37:22,578 | INFO     | all data control threads have been joined
[2025-11-26 03:38:27] 2025-11-26 08:37:22,888 | INFO     | [job] retrieve thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:22,888 | INFO     | [job] job monitor thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:22,898 | INFO     | [payload] failed_post thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:22,915 | INFO     | all payload control threads have been joined
[2025-11-26 03:38:27] 2025-11-26 08:37:23,039 | INFO     | [payload] validate_post thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,075 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,085 | INFO     | [job] control thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 03:38:27] 2025-11-26 08:37:23,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 03:38:27] 2025-11-26 08:37:23,584 | INFO     | [data] control thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,589 | INFO     | [data] copytool_in thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,738 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,813 | INFO     | [job] validate thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,921 | INFO     | [payload] control thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,950 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:23,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:24,246 | INFO     | [data] copytool_out thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:24,592 | INFO     | [job] queue monitor thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:27,314 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 03:38:27] 2025-11-26 08:37:53,950 | INFO     | PID=1505693 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 03:38:27] 2025-11-26 08:37:53,951 | INFO     | .. there are 21 such processes running
[2025-11-26 03:38:27] 2025-11-26 08:37:53,952 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 03:38:27] 2025-11-26 08:37:53,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 03:38:27] 2025-11-26 08:37:53,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 03:38:27] 2025-11-26 08:38:17,460 | INFO     | [monitor] cgroup control has ended
[2025-11-26 03:38:27] 2025-11-26 08:38:19,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287117944640)>', '<ExcThread(monitor, started 140286625826560)>']
[2025-11-26 03:38:27] 2025-11-26 08:38:20,107 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 03:38:27] 2025-11-26 08:38:20,107 | INFO     | [monitor] control thread has ended
[2025-11-26 03:38:27] 2025-11-26 08:38:24,142 | INFO     | all workflow threads have been joined
[2025-11-26 03:38:27] 2025-11-26 08:38:24,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 03:38:27] 2025-11-26 08:38:24,142 | INFO     | traces error code: 0
[2025-11-26 03:38:27] 2025-11-26 08:38:24,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 03:38:27] 2025-11-26 08:38:24,703 [wrapper] ==== pilot stdout END ====
[2025-11-26 03:38:27] 2025-11-26 08:38:24,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 03:38:27] 2025-11-26 08:38:24,810 [wrapper] pilotpid: 1505693
[2025-11-26 03:38:27] 2025-11-26 08:38:24,849 [wrapper] Pilot exit status: 0
[2025-11-26 03:38:27] 2025-11-26 08:38:25,016 [wrapper] pandaids: 6893883521
[2025-11-26 03:38:27] 2025-11-26 08:38:25,955 [wrapper] cleanup supervisor_pilot 2468054 1505694
[2025-11-26 03:38:27] 2025-11-26 08:38:26,006 [wrapper] Test setup, not cleaning
[2025-11-26 03:38:27] 2025-11-26 08:38:26,059 [wrapper] apfmon messages muted
[2025-11-26 03:38:27] 2025-11-26 08:38:26,127 [wrapper] ==== wrapper stdout END ====
[2025-11-26 03:38:27] 2025-11-26 08:38:26,167 [wrapper] ==== wrapper stderr END ====
[2025-11-26 03:38:27]  *** Error codes and diagnostics ***
[2025-11-26 03:38:27]     "exeErrorCode": 0,
[2025-11-26 03:38:27]     "exeErrorDiag": "",
[2025-11-26 03:38:27]     "pilotErrorCode": 0,
[2025-11-26 03:38:27]     "pilotErrorDiag": "",
[2025-11-26 03:38:27]  *** Listing of results directory ***
[2025-11-26 03:38:27] total 1328336
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 16:12 pilot3.tar.gz
[2025-11-26 03:38:27] -rwx------. 1 boincer umatlas     36292 Nov 20 16:28 runpilot2-wrapper.sh
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 16:28 queuedata.json
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas       100 Nov 24 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 03:38:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 18:30 run_atlas
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas       105 Nov 24 18:30 job.xml
[2025-11-26 03:38:27] -rw-r--r--. 2 boincer umatlas 409106523 Nov 24 18:30 EVNT.47493127._000912.pool.root.1
[2025-11-26 03:38:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:30 start_atlas.sh
[2025-11-26 03:38:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 18:30 shared
[2025-11-26 03:38:27] -rw-r--r--. 2 boincer umatlas    590100 Nov 24 18:30 input.tar.gz
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas         0 Nov 24 18:30 boinc_lockfile
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 18:30 pandaJob.out
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas        57 Nov 24 18:30 setup.sh.local
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas    991801 Nov 24 18:30 agis_schedconf.cvmfs.json
[2025-11-26 03:38:27] drwx------. 5 boincer umatlas      4096 Nov 24 18:30 pilot3
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas       534 Nov 26 03:05 boinc_task_state.xml
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas 910524584 Nov 26 03:35 HITS.47523449._009118.pool.root.1
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas      1075 Nov 26 03:36 memory_monitor_summary.json
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas   1516240 Nov 26 03:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas   2877995 Nov 26 03:36 log.47523449._009118.job.log.tgz.1
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas      8641 Nov 26 03:37 heartbeat.json
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas      6950 Nov 26 03:37 init_data.xml
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas        95 Nov 26 03:37 pilot_heartbeat.json
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas      4825 Nov 26 03:38 pilotlog.txt
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas  15453853 Nov 26 03:38 log.47523449._009118.job.log.1
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas       353 Nov 26 03:38 output.list
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas        30 Nov 26 03:38 wrapper_checkpoint.txt
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas       620 Nov 26 03:38 runtime_log
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas  18350080 Nov 26 03:38 result.tar.gz
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas      9344 Nov 26 03:38 runtime_log.err
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas       670 Nov 26 03:38 DvMKDmcNRg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm15GKDmyJAhjm.diag
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 03:38 boinc_mmap_file
[2025-11-26 03:38:27] -rw-r--r--. 1 boincer umatlas     21852 Nov 26 03:38 stderr.txt
[2025-11-26 03:38:27] HITS file was successfully produced:
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas 910524584 Nov 26 03:35 shared/HITS.pool.root.1
[2025-11-26 03:38:27]  *** Contents of shared directory: ***
[2025-11-26 03:38:27] total 1307232
[2025-11-26 03:38:27] -rw-r--r--. 2 boincer umatlas 409106523 Nov 24 18:30 ATLAS.root_0
[2025-11-26 03:38:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:30 start_atlas.sh
[2025-11-26 03:38:27] -rw-r--r--. 2 boincer umatlas    590100 Nov 24 18:30 input.tar.gz
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas 910524584 Nov 26 03:35 HITS.pool.root.1
[2025-11-26 03:38:27] -rw-------. 1 boincer umatlas  18350080 Nov 26 03:38 result.tar.gz
03:38:28 (1501143): run_atlas exited; CPU time 214266.220537
03:38:28 (1501143): called boinc_finish(0)

</stderr_txt>
]]>

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