Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:30 (179899): wrapper (7.7.26015): starting
00:03:30 (179899): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:30] Arguments: --nthreads 9
[2025-11-25 00:03:30] Threads: 9
[2025-11-25 00:03:30] Checking for CVMFS
[2025-11-25 00:03:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:32] 2.13.3.0 9230 28031 322984 153270 2 113 28051723 32503809 25689 16776704 0 204223569 99.826 88257000 34152 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:32] CVMFS is ok
[2025-11-25 00:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:32] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:32] Checking for apptainer binary...
[2025-11-25 00:03:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:32] Running /usr/bin/apptainer --version
[2025-11-25 00:03:33] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:33] c-4-35.aglt2.org
[2025-11-25 00:03:33] apptainer works
[2025-11-25 00:03:33] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:33] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:33] Starting ATLAS job with PandaID=6895375665
[2025-11-25 00:03:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:25:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:25:23] 2025-11-26 04:24:25,696 | INFO     | time since job start (83981s) is within the limit (172800.0s)
[2025-11-25 23:25:23] 2025-11-26 04:24:25,851 | INFO     | monitor loop #4957: job 0:6895375665 is in state 'finished'
[2025-11-25 23:25:23] 2025-11-26 04:24:25,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:25:23] 2025-11-26 04:24:26,407 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 23:25:23] 2025-11-26 04:24:26,418 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1827000000008
[2025-11-25 23:25:23] 2025-11-26 04:24:26,433 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895375665/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:25:23] 2025-11-26 04:24:26,438 | INFO     | extracted standard info from prmon json
[2025-11-25 23:25:23] 2025-11-26 04:24:26,439 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:25:23] 2025-11-26 04:24:26,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:25:23] 2025-11-26 04:24:26,489 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:25:23] 2025-11-26 04:24:26,496 | INFO     | sum of square deviations: 804269327825.3326
[2025-11-25 23:25:23] 2025-11-26 04:24:26,590 | INFO     | sum of deviations: 5613567826462.004
[2025-11-25 23:25:23] 2025-11-26 04:24:26,591 | INFO     | mean x: 1764089124.6666667
[2025-11-25 23:25:23] 2025-11-26 04:24:26,591 | INFO     | mean y: 3007510.57860262
[2025-11-25 23:25:23] 2025-11-26 04:24:26,591 | INFO     | intersect: -12309825530.085321
[2025-11-25 23:25:23] 2025-11-26 04:24:26,593 | INFO     | chi2: 13.128225362526711
[2025-11-25 23:25:23] 2025-11-26 04:24:26,599 | INFO     | sum of square deviations: 795521169419.2749
[2025-11-25 23:25:23] 2025-11-26 04:24:26,753 | INFO     | sum of deviations: 6107778241535.998
[2025-11-25 23:25:23] 2025-11-26 04:24:26,753 | INFO     | mean x: 1764088972.17458
[2025-11-25 23:25:23] 2025-11-26 04:24:26,754 | INFO     | mean y: 3016125.1088385684
[2025-11-25 23:25:23] 2025-11-26 04:24:26,754 | INFO     | intersect: -13541141660.468302
[2025-11-25 23:25:23] 2025-11-26 04:24:26,757 | INFO     | chi2: 9.753249787044648
[2025-11-25 23:25:23] 2025-11-26 04:24:26,757 | INFO     | current chi2=9.753249787044648 (change=25.70778214331706 %)
[2025-11-25 23:25:23] 2025-11-26 04:24:26,759 | INFO     | sum of square deviations: 786836686625.545
[2025-11-25 23:25:23] 2025-11-26 04:24:26,880 | INFO     | sum of deviations: 6474800677995.016
[2025-11-25 23:25:23] 2025-11-26 04:24:26,885 | INFO     | mean x: 1764088819.6825514
[2025-11-25 23:25:23] 2025-11-26 04:24:26,885 | INFO     | mean y: 3022566.030058651
[2025-11-25 23:25:23] 2025-11-26 04:24:26,885 | INFO     | intersect: -14513488521.816296
[2025-11-25 23:25:23] 2025-11-26 04:24:26,887 | INFO     | chi2: 7.617594835403342
[2025-11-25 23:25:23] 2025-11-26 04:24:26,887 | INFO     | current chi2=7.617594835403342 (change=21.896854876803438 %)
[2025-11-25 23:25:23] 2025-11-26 04:24:26,888 | INFO     | right removable region: 1363
[2025-11-25 23:25:23] 2025-11-26 04:24:26,893 | INFO     | sum of square deviations: 795519353449.2759
[2025-11-25 23:25:23] 2025-11-26 04:24:26,976 | INFO     | sum of deviations: 5058518107237.528
[2025-11-25 23:25:23] 2025-11-26 04:24:26,977 | INFO     | mean x: 1764089277.17458
[2025-11-25 23:25:23] 2025-11-26 04:24:26,977 | INFO     | mean y: 3017183.319941563
[2025-11-25 23:25:23] 2025-11-26 04:24:26,977 | INFO     | intersect: -11214406393.717106
[2025-11-25 23:25:23] 2025-11-26 04:24:26,979 | INFO     | chi2: 9.327279452865362
[2025-11-25 23:25:23] 2025-11-26 04:24:26,979 | INFO     | current chi2=9.327279452865362 (change=28.952473047200982 %)
[2025-11-25 23:25:23] 2025-11-26 04:24:26,981 | INFO     | sum of square deviations: 786833054685.5452
[2025-11-25 23:25:23] 2025-11-26 04:24:27,026 | INFO     | sum of deviations: 4661956213082.906
[2025-11-25 23:25:23] 2025-11-26 04:24:27,027 | INFO     | mean x: 1764089429.6825514
[2025-11-25 23:25:23] 2025-11-26 04:24:27,027 | INFO     | mean y: 3024144.5586510263
[2025-11-25 23:25:23] 2025-11-26 04:24:27,027 | INFO     | intersect: -10449139282.19162
[2025-11-25 23:25:23] 2025-11-26 04:24:27,029 | INFO     | chi2: 7.581528468159907
[2025-11-25 23:25:23] 2025-11-26 04:24:27,029 | INFO     | current chi2=7.581528468159907 (change=18.716614995052563 %)
[2025-11-25 23:25:23] 2025-11-26 04:24:27,029 | INFO     | left removable region: 20
[2025-11-25 23:25:23] 2025-11-26 04:24:27,031 | INFO     | sum of square deviations: 751046582198.5194
[2025-11-25 23:25:23] 2025-11-26 04:24:27,076 | INFO     | sum of deviations: 5276442017010.762
[2025-11-25 23:25:23] 2025-11-26 04:24:27,077 | INFO     | mean x: 1764089399.1995533
[2025-11-25 23:25:23] 2025-11-26 04:24:27,077 | INFO     | mean y: 3045811.948622487
[2025-11-25 23:25:23] 2025-11-26 04:24:27,077 | INFO     | intersect: -12390480299.91036
[2025-11-25 23:25:23] 2025-11-26 04:24:27,079 | INFO     | chi2: 1.4176903419788536
[2025-11-25 23:25:23] 2025-11-26 04:24:27,079 | INFO     | current memory leak: 7.03 B/s (using 1343 data points, chi2=1.42)
[2025-11-25 23:25:23] 2025-11-26 04:24:27,080 | INFO     | could have reported an average CPU frequency of 2600 MHz (49 samples)
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | ..............................
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | . Timing measurements:
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | . get job = 0 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | . initial setup = 4 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | . payload setup = 48 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | . stage-in = 0 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,081 | INFO     | . payload execution = 83833 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,082 | INFO     | . stage-out = 6 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,082 | INFO     | . log creation = 1 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,082 | INFO     | ..............................
[2025-11-25 23:25:23] 2025-11-26 04:24:27,452 | INFO     | 
[2025-11-25 23:25:23] 2025-11-26 04:24:27,452 | INFO     | job summary report
[2025-11-25 23:25:23] 2025-11-26 04:24:27,452 | INFO     | --------------------------------------------------
[2025-11-25 23:25:23] 2025-11-26 04:24:27,452 | INFO     | PanDA job id: 6895375665
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | task id: 47556137
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | errors: (none)
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | pilot state: finished 
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | transexitcode: 0
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | exeerrorcode: 0
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | exeerrordiag: 
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | exitcode: 0
[2025-11-25 23:25:23] 2025-11-26 04:24:27,453 | INFO     | exitmsg: OK
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | cpuconsumptiontime: 307528 s
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | nevents: 1000
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | neventsw: 0
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | pid: 200148
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | pgrp: 200148
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | corecount: 9
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | event service: False
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | sizes: {0: 2283481, 1: 2284082, 2: 2284194, 3: 2284393, 4: 2284393, 15: 2284421, 26: 2284577, 35: 2284867, 37: 2284895, 83885: 2348475, 83886: 2348474, 83892: 2357
[2025-11-25 23:25:23] 2025-11-26 04:24:27,454 | INFO     | --------------------------------------------------
[2025-11-25 23:25:23] 2025-11-26 04:24:27,455 | INFO     | 
[2025-11-25 23:25:23] 2025-11-26 04:24:27,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 23:25:23] 2025-11-26 04:24:27,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:25:23] 2025-11-26 04:24:27,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:25:23] 2025-11-26 04:24:27,499 | INFO     | job 6895375665 has completed (purged errors)
[2025-11-25 23:25:23] 2025-11-26 04:24:27,499 | INFO     | overall cleanup function is called
[2025-11-25 23:25:23] 2025-11-26 04:24:28,547 | INFO     | --- collectZombieJob: --- 10, [200148]
[2025-11-25 23:25:23] 2025-11-26 04:24:28,547 | INFO     | zombie collector waiting for pid 200148
[2025-11-25 23:25:23] 2025-11-26 04:24:28,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:25:23] 2025-11-26 04:24:28,547 | INFO     | collected zombie processes
[2025-11-25 23:25:23] 2025-11-26 04:24:28,548 | INFO     | will attempt to kill all subprocesses of pid=200148
[2025-11-25 23:25:23] 2025-11-26 04:24:29,299 | INFO     | process IDs to be killed: [200148] (in reverse order)
[2025-11-25 23:25:23] 2025-11-26 04:24:29,459 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:25:23] 2025-11-26 04:24:29,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:25:23] 2025-11-26 04:24:29,484 | INFO     | did not find any defunct processes belonging to 200148
[2025-11-25 23:25:23] 2025-11-26 04:24:29,500 | INFO     | did not find any defunct processes belonging to 200148
[2025-11-25 23:25:23] 2025-11-26 04:24:29,501 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:25:23] 2025-11-26 04:24:29,502 | INFO     | ready for new job
[2025-11-25 23:25:23] 2025-11-26 04:24:29,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:25:23] 2025-11-26 04:24:29,507 | INFO     | ***************************************
[2025-11-25 23:25:23] 2025-11-26 04:24:29,507 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:25:23] 2025-11-26 04:24:29,507 | INFO     | ***************************************
[2025-11-25 23:25:23] 2025-11-26 04:24:29,508 | INFO     | 
[2025-11-25 23:25:23] 2025-11-26 04:24:29,509 | INFO     | architecture information:
[2025-11-25 23:25:23] 2025-11-26 04:24:29,510 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:25:23] 2025-11-26 04:24:29,526 | INFO     | cat /etc/os-release:
[2025-11-25 23:25:23] NAME="CentOS Linux"
[2025-11-25 23:25:23] VERSION="7 (Core)"
[2025-11-25 23:25:23] ID="centos"
[2025-11-25 23:25:23] ID_LIKE="rhel fedora"
[2025-11-25 23:25:23] VERSION_ID="7"
[2025-11-25 23:25:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:25:23] ANSI_COLOR="0;31"
[2025-11-25 23:25:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:25:23] HOME_URL="https://www.centos.org/"
[2025-11-25 23:25:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:25:23] 
[2025-11-25 23:25:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:25:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:25:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:25:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:25:23] 
[2025-11-25 23:25:23] 2025-11-26 04:24:29,526 | INFO     | ***************************************
[2025-11-25 23:25:23] 2025-11-26 04:24:30,030 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 23:25:23] 2025-11-26 04:24:30,145 | INFO     | sufficient remaining disk space (91580530688 B)
[2025-11-25 23:25:23] 2025-11-26 04:24:30,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:25:23] 2025-11-26 04:24:30,146 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:25:23] 2025-11-26 04:24:30,146 | INFO     | update_server=False
[2025-11-25 23:25:23] 2025-11-26 04:24:30,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:25:23] 2025-11-26 04:24:30,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:25:23] 2025-11-26 04:24:30,147 | INFO     | aborting loop
[2025-11-25 23:25:23] 2025-11-26 04:24:30,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:25:23] 2025-11-26 04:24:30,823 | INFO     | all payload control threads have been joined
[2025-11-25 23:25:23] 2025-11-26 04:24:30,928 | INFO     | all data control threads have been joined
[2025-11-25 23:25:23] 2025-11-26 04:24:31,163 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,164 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,199 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,217 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,265 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:25:23] 2025-11-26 04:24:31,569 | INFO     | all job control threads have been joined
[2025-11-25 23:25:23] 2025-11-26 04:24:31,632 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,829 | INFO     | [payload] control thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,898 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,899 | INFO     | [job] validate thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:31,938 | INFO     | [data] control thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:32,126 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:32,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:25:23] 2025-11-26 04:24:32,500 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:32,577 | INFO     | [job] control thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:33,265 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:33,347 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:34,184 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:25:23] 2025-11-26 04:24:59,480 | INFO     | PID=184483 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 23:25:23] 2025-11-26 04:24:59,480 | INFO     | .. there are 44 such processes running
[2025-11-25 23:25:23] 2025-11-26 04:24:59,481 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:25:23] 2025-11-26 04:24:59,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:25:23] 2025-11-26 04:24:59,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:25:23] 2025-11-26 04:25:15,790 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:25:23] 2025-11-26 04:25:17,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140571696060224)>', '<ExcThread(monitor, started 140570982868736)>']
[2025-11-25 23:25:23] 2025-11-26 04:25:17,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:25:23] 2025-11-26 04:25:17,624 | INFO     | [monitor] control thread has ended
[2025-11-25 23:25:23] 2025-11-26 04:25:22,535 | INFO     | all workflow threads have been joined
[2025-11-25 23:25:23] 2025-11-26 04:25:22,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:25:23] 2025-11-26 04:25:22,536 | INFO     | traces error code: 0
[2025-11-25 23:25:23] 2025-11-26 04:25:22,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:25:23] 2025-11-26 04:25:22,677 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:25:23] 2025-11-26 04:25:22,680 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:25:23] 2025-11-26 04:25:22,683 [wrapper] pilotpid: 184483
[2025-11-25 23:25:23] 2025-11-26 04:25:22,685 [wrapper] Pilot exit status: 0
[2025-11-25 23:25:23] 2025-11-26 04:25:22,699 [wrapper] pandaids: 6895375665
[2025-11-25 23:25:23] 2025-11-26 04:25:22,831 [wrapper] cleanup supervisor_pilot  770444 184484
[2025-11-25 23:25:23] 2025-11-26 04:25:22,845 [wrapper] Test setup, not cleaning
[2025-11-25 23:25:23] 2025-11-26 04:25:22,862 [wrapper] apfmon messages muted
[2025-11-25 23:25:23] 2025-11-26 04:25:22,882 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:25:23] 2025-11-26 04:25:22,898 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:25:23]  *** Error codes and diagnostics ***
[2025-11-25 23:25:23]     "exeErrorCode": 0,
[2025-11-25 23:25:23]     "exeErrorDiag": "",
[2025-11-25 23:25:23]     "pilotErrorCode": 0,
[2025-11-25 23:25:23]     "pilotErrorDiag": "",
[2025-11-25 23:25:23]  *** Listing of results directory ***
[2025-11-25 23:25:23] total 1325560
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-25 23:25:23] -rwx------. 1 boincer umatlas     36292 Nov 23 19:02 runpilot2-wrapper.sh
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 19:02 queuedata.json
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:25:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 23:25:23] -rw-r--r--. 2 boincer umatlas 408947568 Nov 25 00:03 EVNT.47483658._000953.pool.root.1
[2025-11-25 23:25:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 23:25:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 23:25:23] -rw-r--r--. 2 boincer umatlas    590094 Nov 25 00:03 input.tar.gz
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:03 pandaJob.out
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 23:25:23] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:06 boinc_task_state.xml
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas      6661 Nov 25 23:22 init_data.xml
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas 918391217 Nov 25 23:23 HITS.47556137._009396.pool.root.1
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas      1064 Nov 25 23:23 memory_monitor_summary.json
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:24 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas   2539721 Nov 25 23:24 log.47556137._009396.job.log.tgz.1
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas      8624 Nov 25 23:24 heartbeat.json
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas        95 Nov 25 23:24 pilot_heartbeat.json
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:25 boinc_mmap_file
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:25 wrapper_checkpoint.txt
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas      4823 Nov 25 23:25 pilotlog.txt
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas  10513297 Nov 25 23:25 log.47556137._009396.job.log.1
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas       353 Nov 25 23:25 output.list
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:25 runtime_log
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas  13076480 Nov 25 23:25 result.tar.gz
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 23:25 runtime_log.err
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas       659 Nov 25 23:25 pOuNDmADZh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNqIKDmAlyain.diag
[2025-11-25 23:25:23] -rw-r--r--. 1 boincer umatlas     21362 Nov 25 23:25 stderr.txt
[2025-11-25 23:25:23] HITS file was successfully produced:
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas 918391217 Nov 25 23:23 shared/HITS.pool.root.1
[2025-11-25 23:25:23]  *** Contents of shared directory: ***
[2025-11-25 23:25:23] total 1309608
[2025-11-25 23:25:23] -rw-r--r--. 2 boincer umatlas 408947568 Nov 25 00:03 ATLAS.root_0
[2025-11-25 23:25:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 23:25:23] -rw-r--r--. 2 boincer umatlas    590094 Nov 25 00:03 input.tar.gz
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas 918391217 Nov 25 23:23 HITS.pool.root.1
[2025-11-25 23:25:23] -rw-------. 1 boincer umatlas  13076480 Nov 25 23:25 result.tar.gz
23:25:24 (179899): run_atlas exited; CPU time 310118.581311
23:25:24 (179899): called boinc_finish(0)

</stderr_txt>
]]>

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