Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:22 (3543752): wrapper (7.7.26015): starting
15:33:22 (3543752): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 15:33:22] Arguments: --nthreads 12
[2025-11-24 15:33:22] Threads: 12
[2025-11-24 15:33:22] Checking for CVMFS
[2025-11-24 15:33:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 15:33:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 15:33:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 15:33:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 15:33:24] 2.11.5.0 2104101 26150 180932 153263 0 93 28609815 45568000 24444 130560 0 278752349 99.778 184643601 24945 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-24 15:33:24] CVMFS is ok
[2025-11-24 15:33:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 15:33:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 15:33:24] Further information can be found at the LHC@home message board.
[2025-11-24 15:33:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 15:33:24] Checking for apptainer binary...
[2025-11-24 15:33:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 15:33:24] Running /usr/bin/apptainer --version
[2025-11-24 15:33:24] apptainer version 1.4.1-1.el9
[2025-11-24 15:33:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 15:33:25] wns0090.triumf.lcg
[2025-11-24 15:33:25] apptainer works
[2025-11-24 15:33:25] Set ATHENA_PROC_NUMBER=12
[2025-11-24 15:33:25] Set ATHENA_CORE_NUMBER=12
[2025-11-24 15:33:25] Starting ATLAS job with PandaID=6895617914
[2025-11-24 15:33:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:40:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | ..............................
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . Timing measurements:
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . get job = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . initial setup = 5 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . payload setup = 37 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . stage-in = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . payload execution = 117 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . stage-out = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . log creation = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | ..............................
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895617914/pilotlog.txt
[2025-11-24 15:40:42] 2025-11-24 23:40:07,337 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 15:40:42] - Log from pilotlog.txt -
[2025-11-24 15:40:42] 2025-11-24 23:40:07,247 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895617914/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,248 | INFO     | extracted standard info from prmon json
[2025-11-24 15:40:42] 2025-11-24 23:40:07,248 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 15:40:42] 2025-11-24 23:40:07,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:40:42] 2025-11-24 23:40:07,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 15:40:42] 2025-11-24 23:40:07,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | WARNING  | wrong length of table data, x=[1764027383.0, 1764027444.0], y=[1203.0, 430317.0] (must be same and length>=4)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | could have reported an average CPU frequency of 2720 MHz (4 samples)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | ..............................
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . Timing measurements:
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . get job = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . initial setup = 5 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . payload setup = 37 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . stage-in = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . payload execution = 117 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . stage-out = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . log creation = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | ..............................
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895617914/pilotlog.txt
[2025-11-24 15:40:42] 2025-11-24 23:40:07,337 | WARNING  | 
[2025-11-24 15:40:42] [begin log extracts]
[2025-11-24 15:40:42] - Log from pilotlog.txt -
[2025-11-24 15:40:42] 2025-11-24 23:40:07,247 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895617914/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,248 | INFO     | extracted standard info from prmon json
[2025-11-24 15:40:42] 2025-11-24 23:40:07,248 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 15:40:42] 2025-11-24 23:40:07,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:40:42] 2025-11-24 23:40:07,249 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 15:40:42] 2025-11-24 23:40:07,249 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | WARNING  | wrong length of table data, x=[1764027383.0, 1764027444.0], y=[1203.0, 430317.0] (must be same and length>=4)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | could have reported an average CPU frequency of 2720 MHz (4 samples)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | ..............................
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . Timing measurements:
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . get job = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,250 | INFO     | . initial setup = 5 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . payload setup = 37 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . stage-in = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . payload execution = 117 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . stage-out = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | . log creation = 0 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | ..............................
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 15:40:42] 2025-11-24 23:40:07,251 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895617914/pilotlog.txt
[2025-11-24 15:40:42] [end log extracts]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,337 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,338 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 15:40:42] 2025-11-24 23:40:07,534 | INFO     | time since job start (355s) is within the limit (172800.0s)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,702 | INFO     | 
[2025-11-24 15:40:42] 2025-11-24 23:40:07,702 | INFO     | job summary report
[2025-11-24 15:40:42] 2025-11-24 23:40:07,702 | INFO     | --------------------------------------------------
[2025-11-24 15:40:42] 2025-11-24 23:40:07,702 | INFO     | PanDA job id: 6895617914
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | task id: 47556149
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 15:37:40,132 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | pilot state: failed 
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | transexitcode: 65
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | exeerrorcode: 65
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | exitcode: 65
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | cpuconsumptiontime: 44 s
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | nevents: 0
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | neventsw: 0
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | pid: 3554504
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | pgrp: 3554504
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | corecount: 12
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | event service: False
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | sizes: {0: 2284079, 1: 2284163, 2: 2284362, 3: 2284362, 13: 2284390, 24: 2284446, 29: 2284864, 35: 2284892, 158: 2310341, 159: 2310317, 160: 2314943, 297: 2315081}
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | --------------------------------------------------
[2025-11-24 15:40:42] 2025-11-24 23:40:07,703 | INFO     | 
[2025-11-24 15:40:42] 2025-11-24 23:40:07,704 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 15:40:42] 2025-11-24 23:40:07,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:40:42] 2025-11-24 23:40:07,753 | INFO     | job 6895617914 has completed (purged errors)
[2025-11-24 15:40:42] 2025-11-24 23:40:07,753 | INFO     | overall cleanup function is called
[2025-11-24 15:40:42] 2025-11-24 23:40:08,763 | INFO     | --- collectZombieJob: --- 10, [3554504]
[2025-11-24 15:40:42] 2025-11-24 23:40:08,763 | INFO     | zombie collector waiting for pid 3554504
[2025-11-24 15:40:42] 2025-11-24 23:40:08,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:40:42] 2025-11-24 23:40:08,763 | INFO     | collected zombie processes
[2025-11-24 15:40:42] 2025-11-24 23:40:08,764 | INFO     | will attempt to kill all subprocesses of pid=3554504
[2025-11-24 15:40:42] 2025-11-24 23:40:09,165 | INFO     | process IDs to be killed: [3554504] (in reverse order)
[2025-11-24 15:40:42] 2025-11-24 23:40:09,405 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:40:42] 2025-11-24 23:40:09,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:40:42] 2025-11-24 23:40:09,415 | INFO     | did not find any defunct processes belonging to 3554504
[2025-11-24 15:40:42] 2025-11-24 23:40:09,428 | INFO     | did not find any defunct processes belonging to 3554504
[2025-11-24 15:40:42] 2025-11-24 23:40:09,429 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:40:42] 2025-11-24 23:40:09,429 | INFO     | ready for new job
[2025-11-24 15:40:42] 2025-11-24 23:40:09,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:40:42] 2025-11-24 23:40:09,431 | INFO     | ***************************************
[2025-11-24 15:40:42] 2025-11-24 23:40:09,431 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:40:42] 2025-11-24 23:40:09,431 | INFO     | ***************************************
[2025-11-24 15:40:42] 2025-11-24 23:40:09,431 | INFO     | 
[2025-11-24 15:40:42] 2025-11-24 23:40:09,438 | INFO     | architecture information:
[2025-11-24 15:40:42] 2025-11-24 23:40:09,445 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:40:42] 2025-11-24 23:40:09,482 | INFO     | cat /etc/os-release:
[2025-11-24 15:40:42] NAME="CentOS Linux"
[2025-11-24 15:40:42] VERSION="7 (Core)"
[2025-11-24 15:40:42] ID="centos"
[2025-11-24 15:40:42] ID_LIKE="rhel fedora"
[2025-11-24 15:40:42] VERSION_ID="7"
[2025-11-24 15:40:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:40:42] ANSI_COLOR="0;31"
[2025-11-24 15:40:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:40:42] HOME_URL="https://www.centos.org/"
[2025-11-24 15:40:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:40:42] 
[2025-11-24 15:40:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:40:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:40:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:40:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:40:42] 
[2025-11-24 15:40:42] 2025-11-24 23:40:09,483 | INFO     | ***************************************
[2025-11-24 15:40:42] 2025-11-24 23:40:09,986 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 15:40:42] 2025-11-24 23:40:10,003 | INFO     | sufficient remaining disk space (1739484823552 B)
[2025-11-24 15:40:42] 2025-11-24 23:40:10,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:40:42] 2025-11-24 23:40:10,003 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:40:42] 2025-11-24 23:40:10,003 | INFO     | update_server=False
[2025-11-24 15:40:42] 2025-11-24 23:40:10,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:40:42] 2025-11-24 23:40:10,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:40:42] 2025-11-24 23:40:10,162 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 15:40:42] 2025-11-24 23:40:10,162 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 15:40:42] 2025-11-24 23:40:10,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:40:42] 2025-11-24 23:40:10,163 | INFO     | will abort loop
[2025-11-24 15:40:42] 2025-11-24 23:40:10,258 | INFO     | all data control threads have been joined
[2025-11-24 15:40:42] 2025-11-24 23:40:10,497 | INFO     | all payload control threads have been joined
[2025-11-24 15:40:42] 2025-11-24 23:40:11,013 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,035 | INFO     | all job control threads have been joined
[2025-11-24 15:40:42] 2025-11-24 23:40:11,168 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,235 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,265 | INFO     | [data] control thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,503 | INFO     | [payload] control thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,800 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:11,880 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,013 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,023 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,046 | INFO     | [job] control thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,098 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,132 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:40:42] 2025-11-24 23:40:12,160 | INFO     | [job] validate thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:40:42] 2025-11-24 23:40:12,560 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:12,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:40:42] 2025-11-24 23:40:13,531 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:16,588 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:40:42] 2025-11-24 23:40:17,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939662055232)>', '<ExcThread(monitor, started 139939261953792)>']
[2025-11-24 15:40:42] 2025-11-24 23:40:22,666 | INFO     | all workflow threads have been joined
[2025-11-24 15:40:42] 2025-11-24 23:40:22,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:40:42] 2025-11-24 23:40:22,667 | INFO     | traces error code: 0
[2025-11-24 15:40:42] 2025-11-24 23:40:22,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:40:42] 2025-11-24 23:40:40,929 | INFO     | PID=3547532 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:40:42] 2025-11-24 23:40:40,929 | INFO     | .. there are 42 such processes running
[2025-11-24 15:40:42] 2025-11-24 23:40:40,930 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:40:42] 2025-11-24 23:40:40,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:40:42] 2025-11-24 23:40:40,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:40:42] 2025-11-24 23:40:40,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:40:42] 2025-11-24 23:40:40,930 | INFO     | [monitor] control thread has ended
[2025-11-24 15:40:42] 2025-11-24 23:40:41,781 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:40:42] 2025-11-24 23:40:41,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:40:42] 2025-11-24 23:40:41,845 [wrapper] pilotpid: 3547532
[2025-11-24 15:40:42] 2025-11-24 23:40:41,895 [wrapper] Pilot exit status: 0
[2025-11-24 15:40:42] 2025-11-24 23:40:42,050 [wrapper] pandaids: 6895617914
[2025-11-24 15:40:42] 2025-11-24 23:40:42,274 [wrapper] cleanup supervisor_pilot 3547538 3547533
[2025-11-24 15:40:42] 2025-11-24 23:40:42,295 [wrapper] Test setup, not cleaning
[2025-11-24 15:40:42] 2025-11-24 23:40:42,307 [wrapper] apfmon messages muted
[2025-11-24 15:40:42] 2025-11-24 23:40:42,309 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:40:42] 2025-11-24 23:40:42,311 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:40:42]  *** Error codes and diagnostics ***
[2025-11-24 15:40:42]     "exeErrorCode": 65,
[2025-11-24 15:40:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 15:40:42]     "pilotErrorCode": 1305,
[2025-11-24 15:40:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 15:40:42]  *** Listing of results directory ***
[2025-11-24 15:40:42] total 403888
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc    576529 Nov 24 03:12 pilot3.tar.gz
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc      5112 Nov 24 03:21 queuedata.json
[2025-11-24 15:40:42] -rwx------. 1 boinc boinc     36292 Nov 24 03:23 runpilot2-wrapper.sh
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc       100 Nov 24 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:40:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 15:33 run_atlas
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc       105 Nov 24 15:33 job.xml
[2025-11-24 15:40:42] -rw-r--r--. 2 boinc boinc 409349996 Nov 24 15:33 EVNT.47483658._001325.pool.root.1
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc      6595 Nov 24 15:33 init_data.xml
[2025-11-24 15:40:42] drwxrwx--x. 2 boinc boinc      4096 Nov 24 15:33 shared
[2025-11-24 15:40:42] -rw-r--r--. 2 boinc boinc    590105 Nov 24 15:33 input.tar.gz
[2025-11-24 15:40:42] -rw-r--r--. 2 boinc boinc     15847 Nov 24 15:33 start_atlas.sh
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc         0 Nov 24 15:33 boinc_lockfile
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc      2785 Nov 24 15:33 pandaJob.out
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc    991801 Nov 24 15:34 agis_schedconf.cvmfs.json
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc   1516227 Nov 24 15:34 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:40:42] drwx------. 5 boinc boinc      4096 Nov 24 15:34 pilot3
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc       524 Nov 24 15:37 boinc_task_state.xml
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc       986 Nov 24 15:37 memory_monitor_summary.json
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc     49652 Nov 24 15:37 log.47556149._003112.job.log.tgz.1
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc     10335 Nov 24 15:40 heartbeat.json
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc        95 Nov 24 15:40 pilot_heartbeat.json
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc       823 Nov 24 15:40 pilotlog.txt
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc      8192 Nov 24 15:40 boinc_mmap_file
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc        23 Nov 24 15:40 wrapper_checkpoint.txt
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc    108595 Nov 24 15:40 log.47556149._003112.job.log.1
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc       186 Nov 24 15:40 output.list
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc       620 Nov 24 15:40 runtime_log
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc    184320 Nov 24 15:40 result.tar.gz
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc      8636 Nov 24 15:40 runtime_log.err
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc       645 Nov 24 15:40 Is4LDmuqjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmR2IKDmw5JlXo.diag
[2025-11-24 15:40:42] -rw-r--r--. 1 boinc boinc     22488 Nov 24 15:40 stderr.txt
[2025-11-24 15:40:42] No HITS result produced
[2025-11-24 15:40:42]  *** Contents of shared directory: ***
[2025-11-24 15:40:42] total 400536
[2025-11-24 15:40:42] -rw-r--r--. 2 boinc boinc 409349996 Nov 24 15:33 ATLAS.root_0
[2025-11-24 15:40:42] -rw-r--r--. 2 boinc boinc    590105 Nov 24 15:33 input.tar.gz
[2025-11-24 15:40:42] -rw-r--r--. 2 boinc boinc     15847 Nov 24 15:33 start_atlas.sh
[2025-11-24 15:40:42] -rw-------. 1 boinc boinc    184320 Nov 24 15:40 result.tar.gz
15:40:43 (3543752): run_atlas exited; CPU time 53.245020
15:40:43 (3543752): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN