Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
15:34:02 (1869976): wrapper (7.7.26015): starting
15:34:02 (1869976): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 22:54:59] Arguments: --nthreads 4
[2025-11-24 22:54:59] Threads: 4
[2025-11-24 22:54:59] Checking for CVMFS
[2025-11-24 22:54:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:54:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:54:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:54:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:54:59] 2.13.2.0 213864 1796 60496 153261 2 130 2695467 4096000 5057 130560 0 5127004 99.861 514144 780 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 22:54:59] CVMFS is ok
[2025-11-24 22:54:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:54:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 22:54:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 22:54:59] Further information can be found at the LHC@home message board.
[2025-11-24 22:54:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:54:59] Checking for apptainer binary...
[2025-11-24 22:54:59] apptainer is not installed, using version from CVMFS
[2025-11-24 22:54:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:54:59] X670EPG
[2025-11-24 22:54:59] apptainer works
[2025-11-24 22:54:59] Set ATHENA_PROC_NUMBER=4
[2025-11-24 22:54:59] Set ATHENA_CORE_NUMBER=4
[2025-11-24 22:54:59] Starting ATLAS job with PandaID=6895351023
[2025-11-24 22:54:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:54:59]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:54:59] 2025-11-25 05:54:05,327 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-24 22:54:59] 2025-11-25 05:54:06,016 | INFO     | time since job start (26397s) is within the limit (172800.0s)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,295 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 22:54:59] 2025-11-25 05:54:07,297 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4734.727937500001
[2025-11-24 22:54:59] 2025-11-25 05:54:07,299 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6895351023/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,299 | INFO     | extracted standard info from prmon json
[2025-11-24 22:54:59] 2025-11-25 05:54:07,299 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:54:59] 2025-11-25 05:54:07,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:54:59] 2025-11-25 05:54:07,301 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:54:59] 2025-11-25 05:54:07,301 | INFO     | sum of square deviations: 25173279432.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,302 | INFO     | sum of deviations: 174977724568.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,302 | INFO     | mean x: 1764036843.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,302 | INFO     | mean y: 2247772.579676674
[2025-11-24 22:54:59] 2025-11-25 05:54:07,302 | INFO     | intersect: -12259450337.754087
[2025-11-24 22:54:59] 2025-11-25 05:54:07,302 | INFO     | chi2: 2.7153124875256096
[2025-11-24 22:54:59] 2025-11-25 05:54:07,303 | INFO     | sum of square deviations: 24311253967.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | sum of deviations: 218571608960.50003
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | mean x: 1764036690.5
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | mean y: 2255432.675233645
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | intersect: -15857409323.051046
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | chi2: 1.6811233340752831
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | current chi2=1.6811233340752831 (change=38.087297804635185 %)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,304 | INFO     | sum of square deviations: 23469135852.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,305 | INFO     | sum of deviations: 214189107178.99994
[2025-11-24 22:54:59] 2025-11-25 05:54:07,305 | INFO     | mean x: 1764036538.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,305 | INFO     | mean y: 2254638.983451537
[2025-11-24 22:54:59] 2025-11-25 05:54:07,305 | INFO     | intersect: -16097077415.168653
[2025-11-24 22:54:59] 2025-11-25 05:54:07,306 | INFO     | chi2: 1.6802235150374687
[2025-11-24 22:54:59] 2025-11-25 05:54:07,306 | INFO     | current chi2=1.6802235150374687 (change=0.053524867543962545 %)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,306 | INFO     | right removable region: 422
[2025-11-24 22:54:59] 2025-11-25 05:54:07,306 | INFO     | sum of square deviations: 24311253967.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | sum of deviations: 105134740922.99997
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | mean x: 1764036995.5
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | mean y: 2260072.6028037383
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | intersect: -7626370386.040939
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | chi2: 1.0807873054772847
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | current chi2=1.0807873054772847 (change=60.1965773573937 %)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,307 | INFO     | sum of square deviations: 23469135852.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,308 | INFO     | sum of deviations: 94346291415.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,308 | INFO     | mean x: 1764037148.0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,308 | INFO     | mean y: 2262025.1914893617
[2025-11-24 22:54:59] 2025-11-25 05:54:07,308 | INFO     | intersect: -7089194766.470082
[2025-11-24 22:54:59] 2025-11-25 05:54:07,309 | INFO     | chi2: 1.0701363786606437
[2025-11-24 22:54:59] 2025-11-25 05:54:07,309 | INFO     | current chi2=1.0701363786606437 (change=0.9854785268723618 %)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,309 | INFO     | left removable region: 20
[2025-11-24 22:54:59] 2025-11-25 05:54:07,309 | INFO     | sum of square deviations: 20144379560.5
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | sum of deviations: 117311365662.00002
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | mean x: 1764037117.5
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | mean y: 2272543.8308457714
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | intersect: -10270647637.74493
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | chi2: 0.019003839737812316
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | current memory leak: 5.82 B/s (using 402 data points, chi2=0.02)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | could have reported an average CPU frequency of 4635 MHz (18 samples)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | ..............................
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . Timing measurements:
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . get job = 0 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . initial setup = 2 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . payload setup = 2 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . stage-in = 0 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . payload execution = 26371 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . stage-out = 2 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | . log creation = 0 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,310 | INFO     | ..............................
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | 
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | job summary report
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | --------------------------------------------------
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | PanDA job id: 6895351023
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | task id: 47556137
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | errors: (none)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | pilot state: finished 
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | transexitcode: 0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,333 | INFO     | exeerrorcode: 0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | exeerrordiag: 
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | exitcode: 0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | exitmsg: OK
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | cpuconsumptiontime: 104684 s
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | nevents: 1000
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | neventsw: 0
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | pid: 1880488
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | pgrp: 1880488
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | corecount: 4
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | event service: False
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | sizes: {0: 2284265, 2: 2284527, 11: 2284555, 26377: 2322103, 26378: 2322102, 26380: 2331166, 26382: 2331350, 26385: 2331596}
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | --------------------------------------------------
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | 
[2025-11-24 22:54:59] 2025-11-25 05:54:07,334 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | job 6895351023 has completed (purged errors)
[2025-11-24 22:54:59] 2025-11-25 05:54:07,344 | INFO     | overall cleanup function is called
[2025-11-24 22:54:59] 2025-11-25 05:54:08,353 | INFO     | --- collectZombieJob: --- 10, [1880488]
[2025-11-24 22:54:59] 2025-11-25 05:54:08,353 | INFO     | zombie collector waiting for pid 1880488
[2025-11-24 22:54:59] 2025-11-25 05:54:08,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:54:59] 2025-11-25 05:54:08,353 | INFO     | collected zombie processes
[2025-11-24 22:54:59] 2025-11-25 05:54:08,353 | INFO     | will attempt to kill all subprocesses of pid=1880488
[2025-11-24 22:54:59] 2025-11-25 05:54:08,438 | INFO     | process IDs to be killed: [1880488] (in reverse order)
[2025-11-24 22:54:59] 2025-11-25 05:54:08,484 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:54:59] 2025-11-25 05:54:08,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:54:59] 2025-11-25 05:54:08,487 | INFO     | did not find any defunct processes belonging to 1880488
[2025-11-24 22:54:59] 2025-11-25 05:54:08,489 | INFO     | did not find any defunct processes belonging to 1880488
[2025-11-24 22:54:59] 2025-11-25 05:54:08,490 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:54:59] 2025-11-25 05:54:08,490 | INFO     | ready for new job
[2025-11-24 22:54:59] 2025-11-25 05:54:08,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:54:59] 2025-11-25 05:54:08,491 | INFO     | ***************************************
[2025-11-24 22:54:59] 2025-11-25 05:54:08,491 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:54:59] 2025-11-25 05:54:08,491 | INFO     | ***************************************
[2025-11-24 22:54:59] 2025-11-25 05:54:08,492 | INFO     | 
[2025-11-24 22:54:59] 2025-11-25 05:54:08,492 | INFO     | architecture information:
[2025-11-24 22:54:59] 2025-11-25 05:54:08,493 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:54:59] 2025-11-25 05:54:08,501 | INFO     | cat /etc/os-release:
[2025-11-24 22:54:59] NAME="CentOS Linux"
[2025-11-24 22:54:59] VERSION="7 (Core)"
[2025-11-24 22:54:59] ID="centos"
[2025-11-24 22:54:59] ID_LIKE="rhel fedora"
[2025-11-24 22:54:59] VERSION_ID="7"
[2025-11-24 22:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:54:59] ANSI_COLOR="0;31"
[2025-11-24 22:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:54:59] HOME_URL="https://www.centos.org/"
[2025-11-24 22:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:54:59] 
[2025-11-24 22:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:54:59] 
[2025-11-24 22:54:59] 2025-11-25 05:54:08,502 | INFO     | ***************************************
[2025-11-24 22:54:59] 2025-11-25 05:54:09,003 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-11-24 22:54:59] 2025-11-25 05:54:09,014 | INFO     | sufficient remaining disk space (424817983488 B)
[2025-11-24 22:54:59] 2025-11-25 05:54:09,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:54:59] 2025-11-25 05:54:09,015 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:54:59] 2025-11-25 05:54:09,015 | INFO     | update_server=False
[2025-11-24 22:54:59] 2025-11-25 05:54:09,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:54:59] 2025-11-25 05:54:09,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:54:59] 2025-11-25 05:54:09,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:54:59] 2025-11-25 05:54:09,015 | INFO     | aborting loop
[2025-11-24 22:54:59] 2025-11-25 05:54:09,247 | INFO     | all data control threads have been joined
[2025-11-24 22:54:59] 2025-11-25 05:54:09,508 | INFO     | all payload control threads have been joined
[2025-11-24 22:54:59] 2025-11-25 05:54:09,811 | INFO     | all job control threads have been joined
[2025-11-24 22:54:59] 2025-11-25 05:54:10,020 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,020 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,020 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,252 | INFO     | [data] control thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,287 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:54:59] 2025-11-25 05:54:10,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:54:59] 2025-11-25 05:54:10,513 | INFO     | [payload] control thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,531 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,746 | INFO     | [job] validate thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,815 | INFO     | [job] control thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,838 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:10,903 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:11,151 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:11,188 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:12,347 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:14,470 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:19,881 | INFO     | job.realtimelogging is not enabled
[2025-11-24 22:54:59] 2025-11-25 05:54:20,886 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:54:59] 2025-11-25 05:54:39,187 | INFO     | PID=1873823 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 22:54:59] 2025-11-25 05:54:39,187 | INFO     | .. there are 7 such processes running
[2025-11-24 22:54:59] 2025-11-25 05:54:39,187 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:54:59] 2025-11-25 05:54:39,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:54:59] 2025-11-25 05:54:39,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:54:59] 2025-11-25 05:54:52,168 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:54:59] 2025-11-25 05:54:53,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132574047524672)>', '<ExcThread(monitor, started 132573558736640)>']
[2025-11-24 22:54:59] 2025-11-25 05:54:53,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:54:59] 2025-11-25 05:54:53,254 | INFO     | [monitor] control thread has ended
[2025-11-24 22:54:59] 2025-11-25 05:54:58,241 | INFO     | all workflow threads have been joined
[2025-11-24 22:54:59] 2025-11-25 05:54:58,241 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:54:59] 2025-11-25 05:54:58,242 | INFO     | traces error code: 0
[2025-11-24 22:54:59] 2025-11-25 05:54:58,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:54:59] 2025-11-25 05:54:58,290 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:54:59] 2025-11-25 05:54:58,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:54:59] 2025-11-25 05:54:58,293 [wrapper] pilotpid: 1873823
[2025-11-24 22:54:59] 2025-11-25 05:54:58,295 [wrapper] Pilot exit status: 0
[2025-11-24 22:54:59] 2025-11-25 05:54:58,300 [wrapper] pandaids: 6895351023
[2025-11-24 22:54:59] 2025-11-25 05:54:58,324 [wrapper] cleanup supervisor_pilot 2219303 1873824
[2025-11-24 22:54:59] 2025-11-25 05:54:58,325 [wrapper] Test setup, not cleaning
[2025-11-24 22:54:59] 2025-11-25 05:54:58,327 [wrapper] apfmon messages muted
[2025-11-24 22:54:59] 2025-11-25 05:54:58,328 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:54:59] 2025-11-25 05:54:58,330 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:54:59]  *** Error codes and diagnostics ***
[2025-11-24 22:54:59]     "exeErrorCode": 0,
[2025-11-24 22:54:59]     "exeErrorDiag": "",
[2025-11-24 22:54:59]     "pilotErrorCode": 0,
[2025-11-24 22:54:59]     "pilotErrorDiag": "",
[2025-11-24 22:54:59]  *** Listing of results directory ***
[2025-11-24 22:54:59] total 1298280
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc    576529 Nov 22 15:51 pilot3.tar.gz
[2025-11-24 22:54:59] -rwx------ 1 boinc boinc     36292 Nov 22 15:56 runpilot2-wrapper.sh
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc      5112 Nov 22 15:56 queuedata.json
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc       100 Nov 24 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:54:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 15:34 run_atlas
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc       105 Nov 24 15:34 job.xml
[2025-11-24 22:54:59] -rw-r--r-- 2 boinc boinc     15847 Nov 24 15:34 start_atlas.sh
[2025-11-24 22:54:59] drwxrwx--x 2 boinc boinc      4096 Nov 24 15:34 shared
[2025-11-24 22:54:59] -rw-r--r-- 2 boinc boinc    590094 Nov 24 15:34 input.tar.gz
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc      9983 Nov 24 15:34 init_data.xml
[2025-11-24 22:54:59] -rw-r--r-- 2 boinc boinc 407379611 Nov 24 15:34 EVNT.47483658._000534.pool.root.1
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc         0 Nov 24 15:34 boinc_lockfile
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc       112 Nov 24 15:34 stderr.txt
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc      2784 Nov 24 15:34 pandaJob.out
[2025-11-24 22:54:59] -rw------- 1 boinc boinc    991801 Nov 24 15:34 agis_schedconf.cvmfs.json
[2025-11-24 22:54:59] drwx------ 5 boinc boinc      4096 Nov 24 15:34 pilot3
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc       532 Nov 24 22:51 boinc_task_state.xml
[2025-11-24 22:54:59] -rw------- 1 boinc boinc 907973697 Nov 24 22:53 HITS.47556137._005300.pool.root.1
[2025-11-24 22:54:59] -rw------- 1 boinc boinc      1031 Nov 24 22:53 memory_monitor_summary.json
[2025-11-24 22:54:59] -rw------- 1 boinc boinc   1516227 Nov 24 22:54 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:54:59] -rw------- 1 boinc boinc   1262154 Nov 24 22:54 log.47556137._005300.job.log.tgz.1
[2025-11-24 22:54:59] -rw------- 1 boinc boinc      8543 Nov 24 22:54 heartbeat.json
[2025-11-24 22:54:59] -rw------- 1 boinc boinc        95 Nov 24 22:54 pilot_heartbeat.json
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc      8192 Nov 24 22:54 boinc_mmap_file
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc        29 Nov 24 22:54 wrapper_checkpoint.txt
[2025-11-24 22:54:59] -rw------- 1 boinc boinc      4903 Nov 24 22:54 pilotlog.txt
[2025-11-24 22:54:59] -rw------- 1 boinc boinc   3829049 Nov 24 22:54 log.47556137._005300.job.log.1
[2025-11-24 22:54:59] -rw------- 1 boinc boinc       353 Nov 24 22:54 output.list
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc       620 Nov 24 22:54 runtime_log
[2025-11-24 22:54:59] -rw------- 1 boinc boinc   5109760 Nov 24 22:54 result.tar.gz
[2025-11-24 22:54:59] -rw-r--r-- 1 boinc boinc      8920 Nov 24 22:54 runtime_log.err
[2025-11-24 22:54:59] -rw------- 1 boinc boinc       661 Nov 24 22:54 f3DMDmCiBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaRKKDmQGfY6m.diag
[2025-11-24 22:54:59] HITS file was successfully produced:
[2025-11-24 22:54:59] -rw------- 1 boinc boinc 907973697 Nov 24 22:53 shared/HITS.pool.root.1
[2025-11-24 22:54:59]  *** Contents of shared directory: ***
[2025-11-24 22:54:59] total 1290124
[2025-11-24 22:54:59] -rw-r--r-- 2 boinc boinc     15847 Nov 24 15:34 start_atlas.sh
[2025-11-24 22:54:59] -rw-r--r-- 2 boinc boinc    590094 Nov 24 15:34 input.tar.gz
[2025-11-24 22:54:59] -rw-r--r-- 2 boinc boinc 407379611 Nov 24 15:34 ATLAS.root_0
[2025-11-24 22:54:59] -rw------- 1 boinc boinc 907973697 Nov 24 22:53 HITS.pool.root.1
[2025-11-24 22:54:59] -rw------- 1 boinc boinc   5109760 Nov 24 22:54 result.tar.gz
22:54:59 (1869976): run_atlas exited; CPU time 104723.694610
22:54:59 (1869976): called boinc_finish(0)

</stderr_txt>
]]>

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