Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:55:00 (8914): wrapper (7.7.26015): starting
09:55:00 (8914): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:55:00] Arguments: --nthreads 8
[2025-11-27 09:55:00] Threads: 8
[2025-11-27 09:55:00] Checking for CVMFS
[2025-11-27 09:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:55:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:55:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:55:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:55:03] 2.11.2.0 27863 286616 137692 153357 2 84 20236950 25165825 1388 130560 9 145922245 99.878 82540679 3701 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 09:55:03] CVMFS is ok
[2025-11-27 09:55:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:55:03] Checking for apptainer binary...
[2025-11-27 09:55:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:55:03] Running /usr/bin/apptainer --version
[2025-11-27 09:55:04] apptainer version 1.3.2-1.el7
[2025-11-27 09:55:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:55:27] cg-vwn495.simple-grid.lan
[2025-11-27 09:55:27] apptainer works
[2025-11-27 09:55:27] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:55:27] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:55:27] Starting ATLAS job with PandaID=6895375010
[2025-11-27 09:55:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:14:03]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:14:03] 2025-11-28 06:13:15,519 | INFO     | time since job start (76423s) is within the limit (172800.0s)
[2025-11-28 07:14:03] 2025-11-28 06:13:15,638 | INFO     | monitor loop #5191: job 0:6895375010 is in state 'finished'
[2025-11-28 07:14:03] 2025-11-28 06:13:15,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:14:03] 2025-11-28 06:13:17,532 | INFO     | time since job start (76425s) is within the limit (172800.0s)
[2025-11-28 07:14:03] 2025-11-28 06:13:18,143 | INFO     | monitor loop #5192: job 0:6895375010 is in state 'finished'
[2025-11-28 07:14:03] 2025-11-28 06:13:18,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:14:03] 2025-11-28 06:13:19,539 | INFO     | time since job start (76427s) is within the limit (172800.0s)
[2025-11-28 07:14:03] 2025-11-28 06:13:20,648 | INFO     | monitor loop #5193: job 0:6895375010 is in state 'finished'
[2025-11-28 07:14:03] 2025-11-28 06:13:20,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:14:03] 2025-11-28 06:13:21,552 | INFO     | time since job start (76429s) is within the limit (172800.0s)
[2025-11-28 07:14:03] 2025-11-28 06:13:23,154 | INFO     | monitor loop #5194: job 0:6895375010 is in state 'finished'
[2025-11-28 07:14:03] 2025-11-28 06:13:23,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:14:03] 2025-11-28 06:13:23,559 | INFO     | time since job start (76431s) is within the limit (172800.0s)
[2025-11-28 07:14:03] 2025-11-28 06:13:25,566 | INFO     | time since job start (76433s) is within the limit (172800.0s)
[2025-11-28 07:14:03] 2025-11-28 06:13:25,668 | INFO     | monitor loop #5195: job 0:6895375010 is in state 'finished'
[2025-11-28 07:14:03] 2025-11-28 06:13:25,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,042 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 07:14:03] 2025-11-28 06:13:26,043 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-28 07:14:03] 2025-11-28 06:13:26,045 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6895375010/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,046 | INFO     | extracted standard info from prmon json
[2025-11-28 07:14:03] 2025-11-28 06:13:26,046 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 07:14:03] 2025-11-28 06:13:26,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 07:14:03] 2025-11-28 06:13:26,079 | INFO     | fitting pss+swap vs Time
[2025-11-28 07:14:03] 2025-11-28 06:13:26,081 | INFO     | sum of square deviations: 595514001652.9076
[2025-11-28 07:14:03] 2025-11-28 06:13:26,131 | INFO     | sum of deviations: 2922152961261.935
[2025-11-28 07:14:03] 2025-11-28 06:13:26,132 | INFO     | mean x: 1764272379.0410297
[2025-11-28 07:14:03] 2025-11-28 06:13:26,132 | INFO     | mean y: 2841782.491552695
[2025-11-28 07:14:03] 2025-11-28 06:13:26,132 | INFO     | intersect: -8654341327.5241
[2025-11-28 07:14:03] 2025-11-28 06:13:26,134 | INFO     | chi2: 20.942231164130984
[2025-11-28 07:14:03] 2025-11-28 06:13:26,135 | INFO     | sum of square deviations: 588356857464.9673
[2025-11-28 07:14:03] 2025-11-28 06:13:26,191 | INFO     | sum of deviations: 3345401300272.122
[2025-11-28 07:14:03] 2025-11-28 06:13:26,192 | INFO     | mean x: 1764272226.5452342
[2025-11-28 07:14:03] 2025-11-28 06:13:26,192 | INFO     | mean y: 2850800.4353796444
[2025-11-28 07:14:03] 2025-11-28 06:13:26,192 | INFO     | intersect: -10028813700.168924
[2025-11-28 07:14:03] 2025-11-28 06:13:26,193 | INFO     | chi2: 17.594991857562544
[2025-11-28 07:14:03] 2025-11-28 06:13:26,194 | INFO     | current chi2=17.594991857562544 (change=15.983202937332951 %)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,194 | INFO     | right removable region: 1237
[2025-11-28 07:14:03] 2025-11-28 06:13:26,195 | INFO     | sum of square deviations: 588356068124.9668
[2025-11-28 07:14:03] 2025-11-28 06:13:26,242 | INFO     | sum of deviations: 2408643431406.5264
[2025-11-28 07:14:03] 2025-11-28 06:13:26,242 | INFO     | mean x: 1764272531.5452342
[2025-11-28 07:14:03] 2025-11-28 06:13:26,242 | INFO     | mean y: 2852721.9281098545
[2025-11-28 07:14:03] 2025-11-28 06:13:26,242 | INFO     | intersect: -7219820204.451562
[2025-11-28 07:14:03] 2025-11-28 06:13:26,244 | INFO     | chi2: 16.327460128411005
[2025-11-28 07:14:03] 2025-11-28 06:13:26,244 | INFO     | current chi2=16.327460128411005 (change=22.035718159887256 %)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,244 | INFO     | left removable region: 10
[2025-11-28 07:14:03] 2025-11-28 06:13:26,245 | INFO     | sum of square deviations: 572811924435.3412
[2025-11-28 07:14:03] 2025-11-28 06:13:26,296 | INFO     | sum of deviations: 2495315672997.301
[2025-11-28 07:14:03] 2025-11-28 06:13:26,296 | INFO     | mean x: 1764272501.0546048
[2025-11-28 07:14:03] 2025-11-28 06:13:26,296 | INFO     | mean y: 2873565.3537082314
[2025-11-28 07:14:03] 2025-11-28 06:13:26,296 | INFO     | intersect: -7682749997.143629
[2025-11-28 07:14:03] 2025-11-28 06:13:26,298 | INFO     | chi2: 8.72251785249366
[2025-11-28 07:14:03] 2025-11-28 06:13:26,298 | INFO     | current memory leak: 4.36 B/s (using 1227 data points, chi2=8.72)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,299 | INFO     | could have reported an average CPU frequency of 2249 MHz (42 samples)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | ..............................
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . Timing measurements:
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . get job = 0 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . initial setup = 12 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . payload setup = 170 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . stage-in = 0 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . payload execution = 75963 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . stage-out = 5 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | . log creation = 2 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,300 | INFO     | ..............................
[2025-11-28 07:14:03] 2025-11-28 06:13:26,422 | INFO     | 
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | job summary report
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | --------------------------------------------------
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | PanDA job id: 6895375010
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | task id: 47556137
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | errors: (none)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | pilot state: finished 
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | transexitcode: 0
[2025-11-28 07:14:03] 2025-11-28 06:13:26,423 | INFO     | exeerrorcode: 0
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | exeerrordiag: 
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | exitcode: 0
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | exitmsg: OK
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | cpuconsumptiontime: 286364 s
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | nevents: 1000
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | neventsw: 0
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | pid: 19287
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | pgrp: 19287
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | corecount: 8
[2025-11-28 07:14:03] 2025-11-28 06:13:26,424 | INFO     | event service: False
[2025-11-28 07:14:03] 2025-11-28 06:13:26,425 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 22: 2284321, 33: 2284349, 44: 2284405, 55: 2284561, 65: 2284589, 76: 2284617, 87: 2284673, 93: 2284963, 97: 2285271, 7
[2025-11-28 07:14:03] 2025-11-28 06:13:26,425 | INFO     | --------------------------------------------------
[2025-11-28 07:14:03] 2025-11-28 06:13:26,425 | INFO     | 
[2025-11-28 07:14:03] 2025-11-28 06:13:26,425 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-28 07:14:03] 2025-11-28 06:13:26,455 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:14:03] 2025-11-28 06:13:26,457 | INFO     | job 6895375010 has completed (purged errors)
[2025-11-28 07:14:03] 2025-11-28 06:13:26,458 | INFO     | overall cleanup function is called
[2025-11-28 07:14:03] 2025-11-28 06:13:27,474 | INFO     | --- collectZombieJob: --- 10, [19287]
[2025-11-28 07:14:03] 2025-11-28 06:13:27,475 | INFO     | zombie collector waiting for pid 19287
[2025-11-28 07:14:03] 2025-11-28 06:13:27,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:14:03] 2025-11-28 06:13:27,475 | INFO     | collected zombie processes
[2025-11-28 07:14:03] 2025-11-28 06:13:27,475 | INFO     | will attempt to kill all subprocesses of pid=19287
[2025-11-28 07:14:03] 2025-11-28 06:13:27,582 | INFO     | process IDs to be killed: [19287] (in reverse order)
[2025-11-28 07:14:03] 2025-11-28 06:13:27,998 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:14:03] 2025-11-28 06:13:27,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:14:03] 2025-11-28 06:13:28,001 | INFO     | did not find any defunct processes belonging to 19287
[2025-11-28 07:14:03] 2025-11-28 06:13:28,003 | INFO     | did not find any defunct processes belonging to 19287
[2025-11-28 07:14:03] 2025-11-28 06:13:28,054 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:14:03] 2025-11-28 06:13:28,054 | INFO     | ready for new job
[2025-11-28 07:14:03] 2025-11-28 06:13:28,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:14:03] 2025-11-28 06:13:28,058 | INFO     | ***************************************
[2025-11-28 07:14:03] 2025-11-28 06:13:28,058 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:14:03] 2025-11-28 06:13:28,059 | INFO     | ***************************************
[2025-11-28 07:14:03] 2025-11-28 06:13:28,059 | INFO     | 
[2025-11-28 07:14:03] 2025-11-28 06:13:28,059 | INFO     | pilot is running in a VM
[2025-11-28 07:14:03] 2025-11-28 06:13:28,059 | INFO     | architecture information:
[2025-11-28 07:14:03] 2025-11-28 06:13:28,070 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:14:03] 2025-11-28 06:13:28,183 | INFO     | cat /etc/os-release:
[2025-11-28 07:14:03] NAME="CentOS Linux"
[2025-11-28 07:14:03] VERSION="7 (Core)"
[2025-11-28 07:14:03] ID="centos"
[2025-11-28 07:14:03] ID_LIKE="rhel fedora"
[2025-11-28 07:14:03] VERSION_ID="7"
[2025-11-28 07:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:14:03] ANSI_COLOR="0;31"
[2025-11-28 07:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:14:03] HOME_URL="https://www.centos.org/"
[2025-11-28 07:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:14:03] 
[2025-11-28 07:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:14:03] 
[2025-11-28 07:14:03] 2025-11-28 06:13:28,183 | INFO     | ***************************************
[2025-11-28 07:14:03] 2025-11-28 06:13:28,687 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-28 07:14:03] 2025-11-28 06:13:29,071 | INFO     | sufficient remaining disk space (495326330880 B)
[2025-11-28 07:14:03] 2025-11-28 06:13:29,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:14:03] 2025-11-28 06:13:29,072 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:14:03] 2025-11-28 06:13:29,072 | INFO     | update_server=False
[2025-11-28 07:14:03] 2025-11-28 06:13:29,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:14:03] 2025-11-28 06:13:29,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:14:03] 2025-11-28 06:13:29,181 | INFO     | aborting loop
[2025-11-28 07:14:03] 2025-11-28 06:13:29,211 | INFO     | all job control threads have been joined
[2025-11-28 07:14:03] 2025-11-28 06:13:29,615 | INFO     | all data control threads have been joined
[2025-11-28 07:14:03] 2025-11-28 06:13:29,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:14:03] 2025-11-28 06:13:29,881 | INFO     | all payload control threads have been joined
[2025-11-28 07:14:03] 2025-11-28 06:13:29,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:14:03] 2025-11-28 06:13:30,078 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,187 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,217 | INFO     | [job] control thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,368 | INFO     | [job] validate thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,389 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,538 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,580 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,621 | INFO     | [data] control thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,672 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:30,888 | INFO     | [payload] control thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:31,202 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:31,301 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:31,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:14:03] 2025-11-28 06:13:31,814 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:32,443 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:33,914 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:14:03] 2025-11-28 06:13:44,562 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:14:03] 2025-11-28 06:13:46,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674241177408)>', '<ExcThread(monitor, started 139673636677376)>']
[2025-11-28 07:14:03] 2025-11-28 06:13:51,402 | INFO     | all workflow threads have been joined
[2025-11-28 07:14:03] 2025-11-28 06:13:51,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:14:03] 2025-11-28 06:13:51,403 | INFO     | traces error code: 0
[2025-11-28 07:14:03] 2025-11-28 06:13:51,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:14:03] 2025-11-28 06:13:58,737 | INFO     | PID=12689 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 07:14:03] 2025-11-28 06:13:58,737 | INFO     | .. there are 9 such processes running
[2025-11-28 07:14:03] 2025-11-28 06:13:58,738 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:14:03] 2025-11-28 06:13:58,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:14:03] 2025-11-28 06:13:58,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:14:03] 2025-11-28 06:13:58,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:14:03] 2025-11-28 06:13:58,738 | INFO     | [monitor] control thread has ended
[2025-11-28 07:14:03] 2025-11-28 06:13:58,884 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:14:03] 2025-11-28 06:13:58,944 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:14:03] 2025-11-28 06:13:59,065 [wrapper] pilotpid: 12689
[2025-11-28 07:14:03] 2025-11-28 06:13:59,146 [wrapper] Pilot exit status: 0
[2025-11-28 07:14:03] 2025-11-28 06:13:59,197 [wrapper] pandaids: 6895375010
[2025-11-28 07:14:03] 2025-11-28 06:13:59,973 [wrapper] cleanup supervisor_pilot 25201 12690
[2025-11-28 07:14:03] 2025-11-28 06:14:00,008 [wrapper] Test setup, not cleaning
[2025-11-28 07:14:03] 2025-11-28 06:14:00,075 [wrapper] apfmon messages muted
[2025-11-28 07:14:03] 2025-11-28 06:14:00,118 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:14:03] 2025-11-28 06:14:00,165 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:14:03]  *** Error codes and diagnostics ***
[2025-11-28 07:14:03]     "exeErrorCode": 0,
[2025-11-28 07:14:03]     "exeErrorDiag": "",
[2025-11-28 07:14:03]     "pilotErrorCode": 0,
[2025-11-28 07:14:03]     "pilotErrorDiag": "",
[2025-11-28 07:14:03]  *** Listing of results directory ***
[2025-11-28 07:14:03] total 1320576
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc    576529 Nov 24 00:11 pilot3.tar.gz
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc      5112 Nov 24 00:29 queuedata.json
[2025-11-28 07:14:03] -rwx------. 1 boinc boinc     36292 Nov 24 00:33 runpilot2-wrapper.sh
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc       100 Nov 27 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:14:03] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 09:54 run_atlas
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc       105 Nov 27 09:54 job.xml
[2025-11-28 07:14:03] -rw-r--r--. 2 boinc boinc 409256563 Nov 27 09:55 EVNT.47483658._000948.pool.root.1
[2025-11-28 07:14:03] -rw-r--r--. 2 boinc boinc     15847 Nov 27 09:55 start_atlas.sh
[2025-11-28 07:14:03] drwxrwx--x. 2 boinc boinc        68 Nov 27 09:55 shared
[2025-11-28 07:14:03] -rw-r--r--. 2 boinc boinc    590102 Nov 27 09:55 input.tar.gz
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc      6392 Nov 27 09:55 init_data.xml
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc         0 Nov 27 09:55 boinc_lockfile
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc      2785 Nov 27 09:55 pandaJob.out
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc    991573 Nov 27 09:59 agis_schedconf.cvmfs.json
[2025-11-28 07:14:03] drwx------. 5 boinc boinc      4096 Nov 27 09:59 pilot3
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc       533 Nov 28 06:55 boinc_task_state.xml
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc 913927199 Nov 28 07:10 HITS.47556137._009343.pool.root.1
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc      1031 Nov 28 07:11 memory_monitor_summary.json
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc   1516240 Nov 28 07:11 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc   2357717 Nov 28 07:11 log.47556137._009343.job.log.tgz.1
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc      8626 Nov 28 07:13 heartbeat.json
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc      8192 Nov 28 07:13 boinc_mmap_file
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc        29 Nov 28 07:13 wrapper_checkpoint.txt
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc       820 Nov 28 07:13 pilotlog.txt
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc        95 Nov 28 07:13 pilot_heartbeat.json
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc  10235164 Nov 28 07:14 log.47556137._009343.job.log.1
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc       353 Nov 28 07:14 output.list
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc       620 Nov 28 07:14 runtime_log
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc  12615680 Nov 28 07:14 result.tar.gz
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc      8833 Nov 28 07:14 runtime_log.err
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc       662 Nov 28 07:14 hXsKDm0kYh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsHLKDmzunX9n.diag
[2025-11-28 07:14:03] -rw-r--r--. 1 boinc boinc     21444 Nov 28 07:14 stderr.txt
[2025-11-28 07:14:03] HITS file was successfully produced:
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc 913927199 Nov 28 07:10 shared/HITS.pool.root.1
[2025-11-28 07:14:03]  *** Contents of shared directory: ***
[2025-11-28 07:14:03] total 1305092
[2025-11-28 07:14:03] -rw-r--r--. 2 boinc boinc 409256563 Nov 27 09:55 ATLAS.root_0
[2025-11-28 07:14:03] -rw-r--r--. 2 boinc boinc     15847 Nov 27 09:55 start_atlas.sh
[2025-11-28 07:14:03] -rw-r--r--. 2 boinc boinc    590102 Nov 27 09:55 input.tar.gz
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc 913927199 Nov 28 07:10 HITS.pool.root.1
[2025-11-28 07:14:03] -rw-------. 1 boinc boinc  12615680 Nov 28 07:14 result.tar.gz
07:14:04 (8914): run_atlas exited; CPU time 286798.254182
07:14:04 (8914): called boinc_finish(0)

</stderr_txt>
]]>

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