Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:33 (1704733): wrapper (7.7.26015): starting
19:01:33 (1704733): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 19:01:33] Arguments: --nthreads 8
[2025-11-24 19:01:33] Threads: 8
[2025-11-24 19:01:33] Checking for CVMFS
[2025-11-24 19:01:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:01:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:01:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:01:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:01:33] 2.13.3.0 9828 27818 321392 153263 1 112 25604985 32935936 20250 16776704 0 144570271 99.780 85535115 33663 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 19:01:33] CVMFS is ok
[2025-11-24 19:01:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:01:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:01:33] Further information can be found at the LHC@home message board.
[2025-11-24 19:01:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:01:33] Checking for apptainer binary...
[2025-11-24 19:01:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:01:33] Running /usr/bin/apptainer --version
[2025-11-24 19:01:33] apptainer version 1.4.4-1.el9
[2025-11-24 19:01:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:01:33] c-4-39.aglt2.org
[2025-11-24 19:01:33] apptainer works
[2025-11-24 19:01:34] Set ATHENA_PROC_NUMBER=8
[2025-11-24 19:01:34] Set ATHENA_CORE_NUMBER=8
[2025-11-24 19:01:34] Starting ATLAS job with PandaID=6895361927
[2025-11-24 19:01:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:34:19]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:34:39] 2025-11-25 21:33:04,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:34:39] 2025-11-25 21:33:04,981 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:34:39] 2025-11-25 21:33:04,983 | INFO     | sum of square deviations: 633683897733.477
[2025-11-25 16:34:39] 2025-11-25 21:33:05,056 | INFO     | sum of deviations: 3205462234127.7314
[2025-11-25 16:34:39] 2025-11-25 21:33:05,060 | INFO     | mean x: 1764067626.9180458
[2025-11-25 16:34:39] 2025-11-25 21:33:05,061 | INFO     | mean y: 2958012.680063042
[2025-11-25 16:34:39] 2025-11-25 21:33:05,061 | INFO     | intersect: -8920500791.872725
[2025-11-25 16:34:39] 2025-11-25 21:33:05,063 | INFO     | chi2: 9.6900955453399
[2025-11-25 16:34:39] 2025-11-25 21:33:05,069 | INFO     | sum of square deviations: 626223536424.2457
[2025-11-25 16:34:39] 2025-11-25 21:33:05,155 | INFO     | sum of deviations: 3627588516298.6006
[2025-11-25 16:34:39] 2025-11-25 21:33:05,156 | INFO     | mean x: 1764067474.421677
[2025-11-25 16:34:39] 2025-11-25 21:33:05,156 | INFO     | mean y: 2966639.70806962
[2025-11-25 16:34:39] 2025-11-25 21:33:05,156 | INFO     | intersect: -10215925720.56347
[2025-11-25 16:34:39] 2025-11-25 21:33:05,158 | INFO     | chi2: 6.685211833793467
[2025-11-25 16:34:39] 2025-11-25 21:33:05,158 | INFO     | current chi2=6.685211833793467 (change=31.00984605865443 %)
[2025-11-25 16:34:39] 2025-11-25 21:33:05,164 | INFO     | sum of square deviations: 618821966914.9818
[2025-11-25 16:34:39] 2025-11-25 21:33:05,267 | INFO     | time since job start (77472s) is within the limit (172800.0s)
[2025-11-25 16:34:39] 2025-11-25 21:33:05,291 | INFO     | sum of deviations: 4068789646983.4263
[2025-11-25 16:34:39] 2025-11-25 21:33:05,291 | INFO     | mean x: 1764067321.9253376
[2025-11-25 16:34:39] 2025-11-25 21:33:05,291 | INFO     | mean y: 2975727.579030977
[2025-11-25 16:34:39] 2025-11-25 21:33:05,291 | INFO     | intersect: -11595867299.6235
[2025-11-25 16:34:39] 2025-11-25 21:33:05,293 | INFO     | chi2: 3.360033299261445
[2025-11-25 16:34:39] 2025-11-25 21:33:05,293 | INFO     | current chi2=3.360033299261445 (change=49.739314433140066 %)
[2025-11-25 16:34:39] 2025-11-25 21:33:05,303 | INFO     | sum of square deviations: 611478803290.8965
[2025-11-25 16:34:39] 2025-11-25 21:33:05,427 | INFO     | sum of deviations: 4174432438289.2144
[2025-11-25 16:34:39] 2025-11-25 21:33:05,427 | INFO     | mean x: 1764067169.4274323
[2025-11-25 16:34:39] 2025-11-25 21:33:05,428 | INFO     | mean y: 2977918.249601276
[2025-11-25 16:34:39] 2025-11-25 21:33:05,428 | INFO     | intersect: -12039923938.277502
[2025-11-25 16:34:39] 2025-11-25 21:33:05,440 | INFO     | chi2: 2.983932694957068
[2025-11-25 16:34:39] 2025-11-25 21:33:05,440 | INFO     | current chi2=2.983932694957068 (change=11.19335943447483 %)
[2025-11-25 16:34:39] 2025-11-25 21:33:05,440 | INFO     | right removable region: 1253
[2025-11-25 16:34:39] 2025-11-25 21:33:05,446 | INFO     | sum of square deviations: 626222825774.2457
[2025-11-25 16:34:39] 2025-11-25 21:33:05,589 | INFO     | sum of deviations: 2796228994438.7285
[2025-11-25 16:34:39] 2025-11-25 21:33:05,589 | INFO     | mean x: 1764067779.421677
[2025-11-25 16:34:39] 2025-11-25 21:33:05,589 | INFO     | mean y: 2966373.148734177
[2025-11-25 16:34:39] 2025-11-25 21:33:05,589 | INFO     | intersect: -7874002127.441016
[2025-11-25 16:34:39] 2025-11-25 21:33:05,602 | INFO     | chi2: 7.1494730415836845
[2025-11-25 16:34:39] 2025-11-25 21:33:05,603 | INFO     | current chi2=7.1494730415836845 (change=26.218755964465558 %)
[2025-11-25 16:34:39] 2025-11-25 21:33:05,617 | INFO     | sum of square deviations: 618820545614.9818
[2025-11-25 16:34:39] 2025-11-25 21:33:05,765 | INFO     | sum of deviations: 2703009137523.7026
[2025-11-25 16:34:39] 2025-11-25 21:33:05,766 | INFO     | mean x: 1764067931.9253376
[2025-11-25 16:34:39] 2025-11-25 21:33:05,766 | INFO     | mean y: 2968293.3478951547
[2025-11-25 16:34:39] 2025-11-25 21:33:05,766 | INFO     | intersect: -7702483267.682639
[2025-11-25 16:34:39] 2025-11-25 21:33:05,768 | INFO     | chi2: 7.097827026496582
[2025-11-25 16:34:39] 2025-11-25 21:33:05,768 | INFO     | current chi2=7.097827026496582 (change=0.7223751287222415 %)
[2025-11-25 16:34:39] 2025-11-25 21:33:05,768 | INFO     | left removable region: 20
[2025-11-25 16:34:39] 2025-11-25 21:33:05,788 | INFO     | sum of square deviations: 581269387721.7961
[2025-11-25 16:34:39] 2025-11-25 21:33:05,991 | INFO     | sum of deviations: 3523196540549.614
[2025-11-25 16:34:39] 2025-11-25 21:33:06,003 | INFO     | mean x: 1764067748.9416058
[2025-11-25 16:34:39] 2025-11-25 21:33:06,004 | INFO     | mean y: 2991669.8418491483
[2025-11-25 16:34:39] 2025-11-25 21:33:06,004 | INFO     | intersect: -10689395580.630173
[2025-11-25 16:34:39] 2025-11-25 21:33:06,006 | INFO     | chi2: 0.3171773316659479
[2025-11-25 16:34:39] 2025-11-25 21:33:06,006 | INFO     | current memory leak: 6.06 B/s (using 1233 data points, chi2=0.32)
[2025-11-25 16:34:39] 2025-11-25 21:33:06,021 | INFO     | could have reported an average CPU frequency of 2600 MHz (46 samples)
[2025-11-25 16:34:39] 2025-11-25 21:33:06,021 | INFO     | ..............................
[2025-11-25 16:34:39] 2025-11-25 21:33:06,021 | INFO     | . Timing measurements:
[2025-11-25 16:34:39] 2025-11-25 21:33:06,021 | INFO     | . get job = 0 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | . initial setup = 2 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | . payload setup = 11 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | . stage-in = 0 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | . payload execution = 77394 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | . stage-out = 8 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | . log creation = 2 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,022 | INFO     | ..............................
[2025-11-25 16:34:39] 2025-11-25 21:33:06,372 | INFO     | 
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | job summary report
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | --------------------------------------------------
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | PanDA job id: 6895361927
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | task id: 47556137
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | errors: (none)
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | pilot state: finished 
[2025-11-25 16:34:39] 2025-11-25 21:33:06,373 | INFO     | transexitcode: 0
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | exeerrorcode: 0
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | exeerrordiag: 
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | exitcode: 0
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | exitmsg: OK
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | cpuconsumptiontime: 308754 s
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | nevents: 1000
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | neventsw: 0
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | pid: 1719368
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | pgrp: 1719368
[2025-11-25 16:34:39] 2025-11-25 21:33:06,374 | INFO     | corecount: 8
[2025-11-25 16:34:39] 2025-11-25 21:33:06,375 | INFO     | event service: False
[2025-11-25 16:34:39] 2025-11-25 21:33:06,375 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 9: 2284628, 12: 2284656, 77409: 2347368, 77419: 2356367, 77421: 2356423, 77452: 2356669}
[2025-11-25 16:34:39] 2025-11-25 21:33:06,375 | INFO     | --------------------------------------------------
[2025-11-25 16:34:39] 2025-11-25 21:33:06,375 | INFO     | 
[2025-11-25 16:34:39] 2025-11-25 21:33:06,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 16:34:39] 2025-11-25 21:33:06,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,614 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:34:39] 2025-11-25 21:33:06,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:34:39] 2025-11-25 21:33:06,618 | INFO     | job 6895361927 has completed (purged errors)
[2025-11-25 16:34:39] 2025-11-25 21:33:06,619 | INFO     | overall cleanup function is called
[2025-11-25 16:34:39] 2025-11-25 21:33:07,650 | INFO     | --- collectZombieJob: --- 10, [1719368]
[2025-11-25 16:34:39] 2025-11-25 21:33:07,650 | INFO     | zombie collector waiting for pid 1719368
[2025-11-25 16:34:39] 2025-11-25 21:33:07,651 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:34:39] 2025-11-25 21:33:07,652 | INFO     | collected zombie processes
[2025-11-25 16:34:39] 2025-11-25 21:33:07,652 | INFO     | will attempt to kill all subprocesses of pid=1719368
[2025-11-25 16:34:39] 2025-11-25 21:33:10,282 | INFO     | process IDs to be killed: [1719368] (in reverse order)
[2025-11-25 16:34:39] 2025-11-25 21:33:10,686 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:34:39] 2025-11-25 21:33:10,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:34:39] 2025-11-25 21:33:10,721 | INFO     | did not find any defunct processes belonging to 1719368
[2025-11-25 16:34:39] 2025-11-25 21:33:10,752 | INFO     | did not find any defunct processes belonging to 1719368
[2025-11-25 16:34:39] 2025-11-25 21:33:10,761 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:34:39] 2025-11-25 21:33:10,761 | INFO     | ready for new job
[2025-11-25 16:34:39] 2025-11-25 21:33:10,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:34:39] 2025-11-25 21:33:10,771 | INFO     | ***************************************
[2025-11-25 16:34:39] 2025-11-25 21:33:10,771 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:34:39] 2025-11-25 21:33:10,771 | INFO     | ***************************************
[2025-11-25 16:34:39] 2025-11-25 21:33:10,800 | INFO     | 
[2025-11-25 16:34:39] 2025-11-25 21:33:10,802 | INFO     | architecture information:
[2025-11-25 16:34:39] 2025-11-25 21:33:10,844 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:34:39] 2025-11-25 21:33:10,933 | INFO     | cat /etc/os-release:
[2025-11-25 16:34:39] NAME="CentOS Linux"
[2025-11-25 16:34:39] VERSION="7 (Core)"
[2025-11-25 16:34:39] ID="centos"
[2025-11-25 16:34:39] ID_LIKE="rhel fedora"
[2025-11-25 16:34:39] VERSION_ID="7"
[2025-11-25 16:34:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:34:39] ANSI_COLOR="0;31"
[2025-11-25 16:34:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:34:39] HOME_URL="https://www.centos.org/"
[2025-11-25 16:34:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:34:39] 
[2025-11-25 16:34:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:34:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:34:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:34:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:34:39] 
[2025-11-25 16:34:39] 2025-11-25 21:33:10,933 | INFO     | ***************************************
[2025-11-25 16:34:39] 2025-11-25 21:33:11,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 16:34:39] 2025-11-25 21:33:11,746 | INFO     | sufficient remaining disk space (72213331968 B)
[2025-11-25 16:34:39] 2025-11-25 21:33:11,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:34:39] 2025-11-25 21:33:11,747 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:34:39] 2025-11-25 21:33:11,747 | INFO     | update_server=False
[2025-11-25 16:34:39] 2025-11-25 21:33:11,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:34:39] 2025-11-25 21:33:11,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:34:39] 2025-11-25 21:33:11,747 | INFO     | aborting loop
[2025-11-25 16:34:39] 2025-11-25 21:33:11,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:34:39] 2025-11-25 21:33:11,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:34:39] 2025-11-25 21:33:12,220 | INFO     | all data control threads have been joined
[2025-11-25 16:34:39] 2025-11-25 21:33:12,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:34:39] 2025-11-25 21:33:12,753 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:12,766 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:12,767 | INFO     | [job] validate thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:12,776 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:12,831 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,044 | INFO     | all job control threads have been joined
[2025-11-25 16:34:39] 2025-11-25 21:33:13,052 | INFO     | all payload control threads have been joined
[2025-11-25 16:34:39] 2025-11-25 21:33:13,226 | INFO     | [data] control thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,409 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,661 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,712 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,895 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:13,971 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:14,050 | INFO     | [job] control thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:14,058 | INFO     | [payload] control thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:14,176 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:16,676 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:34:39] 2025-11-25 21:33:39,462 | INFO     | PID=1710024 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 16:34:39] 2025-11-25 21:33:39,462 | INFO     | .. there are 36 such processes running
[2025-11-25 16:34:39] 2025-11-25 21:33:39,463 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:34:39] 2025-11-25 21:33:39,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:34:39] 2025-11-25 21:33:39,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:34:39] 2025-11-25 21:34:09,040 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:34:39] 2025-11-25 21:34:11,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876399609664)>', '<ExcThread(monitor, started 139875894400768)>']
[2025-11-25 16:34:39] 2025-11-25 21:34:11,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:34:39] 2025-11-25 21:34:11,774 | INFO     | [monitor] control thread has ended
[2025-11-25 16:34:39] 2025-11-25 21:34:16,188 | INFO     | all workflow threads have been joined
[2025-11-25 16:34:39] 2025-11-25 21:34:16,189 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:34:39] 2025-11-25 21:34:16,189 | INFO     | traces error code: 0
[2025-11-25 16:34:39] 2025-11-25 21:34:16,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:34:39] 2025-11-25 21:34:18,231 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:34:39] 2025-11-25 21:34:18,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:34:39] 2025-11-25 21:34:18,301 [wrapper] pilotpid: 1710024
[2025-11-25 16:34:39] 2025-11-25 21:34:18,316 [wrapper] Pilot exit status: 0
[2025-11-25 16:34:39] 2025-11-25 21:34:18,360 [wrapper] pandaids: 6895361927
[2025-11-25 16:34:39] 2025-11-25 21:34:18,598 [wrapper] cleanup supervisor_pilot 1364206 1710025
[2025-11-25 16:34:39] 2025-11-25 21:34:18,606 [wrapper] Test setup, not cleaning
[2025-11-25 16:34:39] 2025-11-25 21:34:18,626 [wrapper] apfmon messages muted
[2025-11-25 16:34:39] 2025-11-25 21:34:18,644 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:34:39] 2025-11-25 21:34:18,654 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:34:39]  *** Error codes and diagnostics ***
[2025-11-25 16:34:39]     "exeErrorCode": 0,
[2025-11-25 16:34:39]     "exeErrorDiag": "",
[2025-11-25 16:34:39]     "pilotErrorCode": 0,
[2025-11-25 16:34:39]     "pilotErrorDiag": "",
[2025-11-25 16:34:39]  *** Listing of results directory ***
[2025-11-25 16:34:39] total 1336828
[2025-11-25 16:34:39] -rwx------. 1 boincer umatlas     36292 Nov 23 09:56 runpilot2-wrapper.sh
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 09:56 queuedata.json
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 09:56 pilot3.tar.gz
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas       100 Nov 24 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:34:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 19:01 run_atlas
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas       105 Nov 24 19:01 job.xml
[2025-11-25 16:34:39] -rw-r--r--. 2 boincer umatlas 409269860 Nov 24 19:01 EVNT.47483658._000771.pool.root.1
[2025-11-25 16:34:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 19:01 start_atlas.sh
[2025-11-25 16:34:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 19:01 shared
[2025-11-25 16:34:39] -rw-r--r--. 2 boincer umatlas    590095 Nov 24 19:01 input.tar.gz
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas         0 Nov 24 19:01 boinc_lockfile
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 19:01 pandaJob.out
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas        57 Nov 24 19:01 setup.sh.local
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas    991801 Nov 24 19:01 agis_schedconf.cvmfs.json
[2025-11-25 16:34:39] drwx------. 5 boincer umatlas      4096 Nov 24 19:01 pilot3
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas       533 Nov 25 16:10 boinc_task_state.xml
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 16:27 init_data.xml
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas 930332368 Nov 25 16:31 HITS.47556137._007665.pool.root.1
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas      1057 Nov 25 16:32 memory_monitor_summary.json
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas   1516240 Nov 25 16:32 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas   2374161 Nov 25 16:32 log.47556137._007665.job.log.tgz.1
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas        95 Nov 25 16:32 pilot_heartbeat.json
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas      8628 Nov 25 16:33 heartbeat.json
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas      4824 Nov 25 16:34 pilotlog.txt
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas  10319022 Nov 25 16:34 log.47556137._007665.job.log.1
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas       353 Nov 25 16:34 output.list
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas       620 Nov 25 16:34 runtime_log
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas  12718080 Nov 25 16:34 result.tar.gz
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 16:34 runtime_log.err
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas       658 Nov 25 16:34 CIsMDmagQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdaIKDmWYybzm.diag
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas        29 Nov 25 16:34 wrapper_checkpoint.txt
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 16:34 boinc_mmap_file
[2025-11-25 16:34:39] -rw-r--r--. 1 boincer umatlas     21147 Nov 25 16:34 stderr.txt
[2025-11-25 16:34:39] HITS file was successfully produced:
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas 930332368 Nov 25 16:31 shared/HITS.pool.root.1
[2025-11-25 16:34:39]  *** Contents of shared directory: ***
[2025-11-25 16:34:39] total 1321228
[2025-11-25 16:34:39] -rw-r--r--. 2 boincer umatlas 409269860 Nov 24 19:01 ATLAS.root_0
[2025-11-25 16:34:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 19:01 start_atlas.sh
[2025-11-25 16:34:39] -rw-r--r--. 2 boincer umatlas    590095 Nov 24 19:01 input.tar.gz
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas 930332368 Nov 25 16:31 HITS.pool.root.1
[2025-11-25 16:34:39] -rw-------. 1 boincer umatlas  12718080 Nov 25 16:34 result.tar.gz
16:34:41 (1704733): run_atlas exited; CPU time 311333.085415
16:34:41 (1704733): called boinc_finish(0)

</stderr_txt>
]]>

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