Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:41:19 (248198): wrapper (7.7.26015): starting
17:41:19 (248198): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:41:19] Arguments: --nthreads 8
[2025-11-24 17:41:19] Threads: 8
[2025-11-24 17:41:19] Checking for CVMFS
[2025-11-24 17:41:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:41:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:41:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:41:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:41:21] 2.13.2.0 12053 33567 277804 153261 2 373 28126874 40960001 14082 16776704 0 33566815 99.715 22235182 37684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 17:41:21] CVMFS is ok
[2025-11-24 17:41:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:41:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:41:21] Further information can be found at the LHC@home message board.
[2025-11-24 17:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:41:21] Checking for apptainer binary...
[2025-11-24 17:41:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:41:21] Running /usr/bin/apptainer --version
[2025-11-24 17:41:21] apptainer version 1.4.4-1.el9
[2025-11-24 17:41:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:41:22] c-210-31-4.aglt2.org
[2025-11-24 17:41:22] apptainer works
[2025-11-24 17:41:22] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:41:22] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:41:22] Starting ATLAS job with PandaID=6895374686
[2025-11-24 17:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:50:28]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:50:29] 2025-11-26 03:49:44,972 | INFO     | time since job start (104849s) is within the limit (172800.0s)
[2025-11-25 22:50:29] 2025-11-26 03:49:45,193 | INFO     | monitor loop #6751: job 0:6895374686 is in state 'finished'
[2025-11-25 22:50:29] 2025-11-26 03:49:45,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:50:29] 2025-11-26 03:49:45,708 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 22:50:29] 2025-11-26 03:49:45,711 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2870.9592678571435
[2025-11-25 22:50:29] 2025-11-26 03:49:45,721 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895374686/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:50:29] 2025-11-26 03:49:45,721 | INFO     | extracted standard info from prmon json
[2025-11-25 22:50:29] 2025-11-26 03:49:45,722 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:50:29] 2025-11-26 03:49:45,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:50:29] 2025-11-26 03:49:45,746 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:50:29] 2025-11-26 03:49:45,749 | INFO     | sum of square deviations: 1569326364852.822
[2025-11-25 22:50:29] 2025-11-26 03:49:45,814 | INFO     | sum of deviations: 10590541102455.338
[2025-11-25 22:50:29] 2025-11-26 03:49:45,815 | INFO     | mean x: 1764076604.8223646
[2025-11-25 22:50:29] 2025-11-26 03:49:45,815 | INFO     | mean y: 2830986.4338963307
[2025-11-25 22:50:29] 2025-11-26 03:49:45,815 | INFO     | intersect: -11901974928.811935
[2025-11-25 22:50:29] 2025-11-26 03:49:45,817 | INFO     | chi2: 14.408366310440455
[2025-11-25 22:50:29] 2025-11-26 03:49:45,819 | INFO     | sum of square deviations: 1555656484946.2034
[2025-11-25 22:50:29] 2025-11-26 03:49:45,866 | INFO     | sum of deviations: 11160851665270.023
[2025-11-25 22:50:29] 2025-11-26 03:49:45,867 | INFO     | mean x: 1764076452.3364487
[2025-11-25 22:50:29] 2025-11-26 03:49:45,867 | INFO     | mean y: 2837347.7447429905
[2025-11-25 22:50:29] 2025-11-26 03:49:45,867 | INFO     | intersect: -12653295803.272684
[2025-11-25 22:50:29] 2025-11-26 03:49:45,869 | INFO     | chi2: 11.201439606934194
[2025-11-25 22:50:29] 2025-11-26 03:49:45,869 | INFO     | current chi2=11.201439606934194 (change=22.257392923044215 %)
[2025-11-25 22:50:29] 2025-11-26 03:49:45,869 | INFO     | right removable region: 1711
[2025-11-25 22:50:29] 2025-11-26 03:49:45,871 | INFO     | sum of square deviations: 1555651434146.206
[2025-11-25 22:50:29] 2025-11-26 03:49:45,917 | INFO     | sum of deviations: 9947196807275.07
[2025-11-25 22:50:29] 2025-11-26 03:49:45,918 | INFO     | mean x: 1764076757.3364487
[2025-11-25 22:50:29] 2025-11-26 03:49:45,918 | INFO     | mean y: 2838160.4894859814
[2025-11-25 22:50:29] 2025-11-26 03:49:45,918 | INFO     | intersect: -11277078601.838448
[2025-11-25 22:50:29] 2025-11-26 03:49:45,920 | INFO     | chi2: 10.692869785161895
[2025-11-25 22:50:29] 2025-11-26 03:49:45,920 | INFO     | current chi2=10.692869785161895 (change=25.787077071925026 %)
[2025-11-25 22:50:29] 2025-11-26 03:49:45,922 | INFO     | sum of square deviations: 1542056132838.9058
[2025-11-25 22:50:29] 2025-11-26 03:49:45,970 | INFO     | sum of deviations: 9367521237161.91
[2025-11-25 22:50:29] 2025-11-26 03:49:45,970 | INFO     | mean x: 1764076909.850615
[2025-11-25 22:50:29] 2025-11-26 03:49:45,970 | INFO     | mean y: 2844663.8230814296
[2025-11-25 22:50:29] 2025-11-26 03:49:45,970 | INFO     | intersect: -10713385157.584408
[2025-11-25 22:50:29] 2025-11-26 03:49:45,972 | INFO     | chi2: 7.812000446472928
[2025-11-25 22:50:29] 2025-11-26 03:49:45,972 | INFO     | current chi2=7.812000446472928 (change=26.941965969572017 %)
[2025-11-25 22:50:29] 2025-11-26 03:49:45,974 | INFO     | sum of square deviations: 1528540332504.1475
[2025-11-25 22:50:29] 2025-11-26 03:49:46,022 | INFO     | sum of deviations: 8890391564827.238
[2025-11-25 22:50:29] 2025-11-26 03:49:46,022 | INFO     | mean x: 1764077062.3642774
[2025-11-25 22:50:29] 2025-11-26 03:49:46,022 | INFO     | mean y: 2850046.856051704
[2025-11-25 22:50:29] 2025-11-26 03:49:46,022 | INFO     | intersect: -10257484928.574522
[2025-11-25 22:50:29] 2025-11-26 03:49:46,024 | INFO     | chi2: 5.992966808255868
[2025-11-25 22:50:29] 2025-11-26 03:49:46,024 | INFO     | current chi2=5.992966808255868 (change=23.28511948611503 %)
[2025-11-25 22:50:29] 2025-11-26 03:49:46,024 | INFO     | left removable region: 30
[2025-11-25 22:50:29] 2025-11-26 03:49:46,026 | INFO     | sum of square deviations: 1472642392675.001
[2025-11-25 22:50:29] 2025-11-26 03:49:46,073 | INFO     | sum of deviations: 8957353981758.164
[2025-11-25 22:50:29] 2025-11-26 03:49:46,073 | INFO     | mean x: 1764077336.9190958
[2025-11-25 22:50:29] 2025-11-26 03:49:46,073 | INFO     | mean y: 2865515.9571683523
[2025-11-25 22:50:29] 2025-11-26 03:49:46,073 | INFO     | intersect: -10727142825.904305
[2025-11-25 22:50:29] 2025-11-26 03:49:46,075 | INFO     | chi2: 0.789527545967889
[2025-11-25 22:50:29] 2025-11-26 03:49:46,075 | INFO     | current memory leak: 6.08 B/s (using 1681 data points, chi2=0.79)
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | could have reported an average CPU frequency of 2828 MHz (61 samples)
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | ..............................
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | . Timing measurements:
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | . get job = 0 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | . initial setup = 4 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | . payload setup = 38 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,077 | INFO     | . stage-in = 0 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,078 | INFO     | . payload execution = 104736 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,078 | INFO     | . stage-out = 4 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,079 | INFO     | . log creation = 1 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,079 | INFO     | ..............................
[2025-11-25 22:50:29] 2025-11-26 03:49:46,205 | INFO     | 
[2025-11-25 22:50:29] 2025-11-26 03:49:46,205 | INFO     | job summary report
[2025-11-25 22:50:29] 2025-11-26 03:49:46,205 | INFO     | --------------------------------------------------
[2025-11-25 22:50:29] 2025-11-26 03:49:46,205 | INFO     | PanDA job id: 6895374686
[2025-11-25 22:50:29] 2025-11-26 03:49:46,205 | INFO     | task id: 47556137
[2025-11-25 22:50:29] 2025-11-26 03:49:46,205 | INFO     | errors: (none)
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | pilot state: finished 
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | transexitcode: 0
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | exeerrorcode: 0
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | exeerrordiag: 
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | exitcode: 0
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | exitmsg: OK
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | cpuconsumptiontime: 249671 s
[2025-11-25 22:50:29] 2025-11-26 03:49:46,206 | INFO     | nevents: 1000
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | neventsw: 0
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | pid: 259788
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | pgrp: 259788
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | corecount: 8
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | event service: False
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | sizes: {0: 2284139, 1: 2284139, 2: 2284366, 13: 2284366, 24: 2284422, 29: 2284712, 35: 2284868, 104775: 2359526, 104780: 2368581, 104791: 2368771}
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | --------------------------------------------------
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | 
[2025-11-25 22:50:29] 2025-11-26 03:49:46,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:50:29] 2025-11-26 03:49:46,235 | INFO     | job 6895374686 has completed (purged errors)
[2025-11-25 22:50:29] 2025-11-26 03:49:46,235 | INFO     | overall cleanup function is called
[2025-11-25 22:50:29] 2025-11-26 03:49:47,251 | INFO     | --- collectZombieJob: --- 10, [259788]
[2025-11-25 22:50:29] 2025-11-26 03:49:47,252 | INFO     | zombie collector waiting for pid 259788
[2025-11-25 22:50:29] 2025-11-26 03:49:47,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:50:29] 2025-11-26 03:49:47,252 | INFO     | collected zombie processes
[2025-11-25 22:50:29] 2025-11-26 03:49:47,252 | INFO     | will attempt to kill all subprocesses of pid=259788
[2025-11-25 22:50:29] 2025-11-26 03:49:47,502 | INFO     | process IDs to be killed: [259788] (in reverse order)
[2025-11-25 22:50:29] 2025-11-26 03:49:47,586 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:50:29] 2025-11-26 03:49:47,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:50:29] 2025-11-26 03:49:47,596 | INFO     | did not find any defunct processes belonging to 259788
[2025-11-25 22:50:29] 2025-11-26 03:49:47,605 | INFO     | did not find any defunct processes belonging to 259788
[2025-11-25 22:50:29] 2025-11-26 03:49:47,607 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:50:29] 2025-11-26 03:49:47,607 | INFO     | ready for new job
[2025-11-25 22:50:29] 2025-11-26 03:49:47,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:50:29] 2025-11-26 03:49:47,614 | INFO     | ***************************************
[2025-11-25 22:50:29] 2025-11-26 03:49:47,614 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:50:29] 2025-11-26 03:49:47,615 | INFO     | ***************************************
[2025-11-25 22:50:29] 2025-11-26 03:49:47,615 | INFO     | 
[2025-11-25 22:50:29] 2025-11-26 03:49:47,618 | INFO     | architecture information:
[2025-11-25 22:50:29] 2025-11-26 03:49:47,619 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:50:29] 2025-11-26 03:49:47,669 | INFO     | cat /etc/os-release:
[2025-11-25 22:50:29] NAME="CentOS Linux"
[2025-11-25 22:50:29] VERSION="7 (Core)"
[2025-11-25 22:50:29] ID="centos"
[2025-11-25 22:50:29] ID_LIKE="rhel fedora"
[2025-11-25 22:50:29] VERSION_ID="7"
[2025-11-25 22:50:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:50:29] ANSI_COLOR="0;31"
[2025-11-25 22:50:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:50:29] HOME_URL="https://www.centos.org/"
[2025-11-25 22:50:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:50:29] 
[2025-11-25 22:50:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:50:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:50:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:50:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:50:29] 
[2025-11-25 22:50:29] 2025-11-26 03:49:47,670 | INFO     | ***************************************
[2025-11-25 22:50:29] 2025-11-26 03:49:48,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 22:50:29] 2025-11-26 03:49:48,202 | INFO     | sufficient remaining disk space (69212307456 B)
[2025-11-25 22:50:29] 2025-11-26 03:49:48,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:50:29] 2025-11-26 03:49:48,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:50:29] 2025-11-26 03:49:48,203 | INFO     | update_server=False
[2025-11-25 22:50:29] 2025-11-26 03:49:48,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:50:29] 2025-11-26 03:49:48,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:50:29] 2025-11-26 03:49:48,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:50:29] 2025-11-26 03:49:48,344 | INFO     | all payload control threads have been joined
[2025-11-25 22:50:29] 2025-11-26 03:49:48,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:50:29] 2025-11-26 03:49:48,714 | INFO     | aborting loop
[2025-11-25 22:50:29] 2025-11-26 03:49:49,155 | INFO     | all data control threads have been joined
[2025-11-25 22:50:29] 2025-11-26 03:49:49,210 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,212 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,230 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,251 | INFO     | all job control threads have been joined
[2025-11-25 22:50:29] 2025-11-26 03:49:49,351 | INFO     | [payload] control thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,612 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,716 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,719 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,886 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,894 | INFO     | [job] validate thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:49,928 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:50,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:50:29] 2025-11-26 03:49:50,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:50,186 | INFO     | [data] control thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:50,212 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:50,257 | INFO     | [job] control thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:50,606 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:49:54,053 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:50:29] 2025-11-26 03:50:18,396 | INFO     | PID=252072 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 22:50:29] 2025-11-26 03:50:18,396 | INFO     | .. there are 12 such processes running
[2025-11-25 22:50:29] 2025-11-26 03:50:18,396 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:50:29] 2025-11-26 03:50:18,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:50:29] 2025-11-26 03:50:18,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:50:29] 2025-11-26 03:50:20,518 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:50:29] 2025-11-26 03:50:22,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322454239040)>', '<ExcThread(monitor, started 140321748940544)>']
[2025-11-25 22:50:29] 2025-11-26 03:50:22,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:50:29] 2025-11-26 03:50:22,421 | INFO     | [monitor] control thread has ended
[2025-11-25 22:50:29] 2025-11-26 03:50:27,240 | INFO     | all workflow threads have been joined
[2025-11-25 22:50:29] 2025-11-26 03:50:27,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:50:29] 2025-11-26 03:50:27,240 | INFO     | traces error code: 0
[2025-11-25 22:50:29] 2025-11-26 03:50:27,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:50:29] 2025-11-26 03:50:27,503 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:50:29] 2025-11-26 03:50:27,508 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:50:29] 2025-11-26 03:50:27,512 [wrapper] pilotpid: 252072
[2025-11-25 22:50:29] 2025-11-26 03:50:27,518 [wrapper] Pilot exit status: 0
[2025-11-25 22:50:29] 2025-11-26 03:50:27,731 [wrapper] pandaids: 6895374686
[2025-11-25 22:50:29] 2025-11-26 03:50:27,833 [wrapper] cleanup supervisor_pilot 2877126 252073
[2025-11-25 22:50:29] 2025-11-26 03:50:27,837 [wrapper] Test setup, not cleaning
[2025-11-25 22:50:29] 2025-11-26 03:50:27,840 [wrapper] apfmon messages muted
[2025-11-25 22:50:29] 2025-11-26 03:50:27,844 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:50:29] 2025-11-26 03:50:27,847 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:50:29]  *** Error codes and diagnostics ***
[2025-11-25 22:50:29]     "exeErrorCode": 0,
[2025-11-25 22:50:29]     "exeErrorDiag": "",
[2025-11-25 22:50:29]     "pilotErrorCode": 0,
[2025-11-25 22:50:29]     "pilotErrorDiag": "",
[2025-11-25 22:50:29]  *** Listing of results directory ***
[2025-11-25 22:50:29] total 1326916
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-25 22:50:29] -rwx------. 1 boincer umatlas     36292 Nov 23 18:26 runpilot2-wrapper.sh
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:26 queuedata.json
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas       100 Nov 24 17:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:50:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 17:41 run_atlas
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas       105 Nov 24 17:41 job.xml
[2025-11-25 22:50:29] -rw-r--r--. 2 boincer umatlas 412665690 Nov 24 17:41 EVNT.47483658._000945.pool.root.1
[2025-11-25 22:50:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 17:41 shared
[2025-11-25 22:50:29] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 17:41 input.tar.gz
[2025-11-25 22:50:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:41 start_atlas.sh
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas         0 Nov 24 17:41 boinc_lockfile
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 17:41 pandaJob.out
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas        57 Nov 24 17:41 setup.sh.local
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas    991801 Nov 24 17:42 agis_schedconf.cvmfs.json
[2025-11-25 22:50:29] drwx------. 5 boincer umatlas      4096 Nov 24 17:42 pilot3
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas       533 Nov 25 22:37 boinc_task_state.xml
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas 909170744 Nov 25 22:48 HITS.47556137._009315.pool.root.1
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas      1069 Nov 25 22:49 memory_monitor_summary.json
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas   1516240 Nov 25 22:49 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas   2704259 Nov 25 22:49 log.47556137._009315.job.log.tgz.1
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas        95 Nov 25 22:49 pilot_heartbeat.json
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas      8648 Nov 25 22:49 heartbeat.json
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas      6842 Nov 25 22:49 init_data.xml
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas      4823 Nov 25 22:50 pilotlog.txt
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas        29 Nov 25 22:50 wrapper_checkpoint.txt
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas  13797394 Nov 25 22:50 log.47556137._009315.job.log.1
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 22:50 boinc_mmap_file
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas       353 Nov 25 22:50 output.list
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas       620 Nov 25 22:50 runtime_log
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas  16517120 Nov 25 22:50 result.tar.gz
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas      9354 Nov 25 22:50 runtime_log.err
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas       668 Nov 25 22:50 dYGLDmjeYh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcHLKDmEdQQ6n.diag
[2025-11-25 22:50:29] -rw-r--r--. 1 boincer umatlas     21367 Nov 25 22:50 stderr.txt
[2025-11-25 22:50:29] HITS file was successfully produced:
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas 909170744 Nov 25 22:48 shared/HITS.pool.root.1
[2025-11-25 22:50:29]  *** Contents of shared directory: ***
[2025-11-25 22:50:29] total 1307596
[2025-11-25 22:50:29] -rw-r--r--. 2 boincer umatlas 412665690 Nov 24 17:41 ATLAS.root_0
[2025-11-25 22:50:29] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 17:41 input.tar.gz
[2025-11-25 22:50:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:41 start_atlas.sh
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas 909170744 Nov 25 22:48 HITS.pool.root.1
[2025-11-25 22:50:29] -rw-------. 1 boincer umatlas  16517120 Nov 25 22:50 result.tar.gz
22:50:30 (248198): run_atlas exited; CPU time 251152.344194
22:50:30 (248198): called boinc_finish(0)

</stderr_txt>
]]>

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