Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:36:13 (3387365): wrapper (7.7.26015): starting
17:36:13 (3387365): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:36:13] Arguments: --nthreads 8
[2025-11-24 17:36:13] Threads: 8
[2025-11-24 17:36:13] Checking for CVMFS
[2025-11-24 17:36:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:36:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:36:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:36:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:36:14] 2.13.3.0 5308 6163 214384 153261 0 245 23666441 32935936 18247 16776704 0 15020400 99.424 27342755 41389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 17:36:14] CVMFS is ok
[2025-11-24 17:36:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:36:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:36:14] Further information can be found at the LHC@home message board.
[2025-11-24 17:36:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:36:14] Checking for apptainer binary...
[2025-11-24 17:36:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:36:14] Running /usr/bin/apptainer --version
[2025-11-24 17:36:14] apptainer version 1.4.4-1.el9
[2025-11-24 17:36:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:36:15] c6-1-24-1.aglt2.org
[2025-11-24 17:36:15] apptainer works
[2025-11-24 17:36:15] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:36:15] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:36:15] Starting ATLAS job with PandaID=6895362323
[2025-11-24 17:36:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:56:11]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:56:11] 2025-11-26 13:55:18,561 | INFO     | time since job start (141514s) is within the limit (172800.0s)
[2025-11-26 08:56:11] 2025-11-26 13:55:18,913 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 08:56:11] 2025-11-26 13:55:18,916 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2703.914125
[2025-11-26 08:56:11] 2025-11-26 13:55:18,926 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895362323/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:56:11] 2025-11-26 13:55:18,927 | INFO     | extracted standard info from prmon json
[2025-11-26 08:56:11] 2025-11-26 13:55:18,927 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:56:11] 2025-11-26 13:55:18,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:56:11] 2025-11-26 13:55:18,962 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:56:11] 2025-11-26 13:55:18,964 | INFO     | sum of square deviations: 3867027780101.1895
[2025-11-26 08:56:11] 2025-11-26 13:55:18,982 | INFO     | monitor loop #8587: job 0:6895362323 is in state 'finished'
[2025-11-26 08:56:11] 2025-11-26 13:55:18,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,074 | INFO     | sum of deviations: 11510686894946.34
[2025-11-26 08:56:11] 2025-11-26 13:55:19,075 | INFO     | mean x: 1764094554.0771885
[2025-11-26 08:56:11] 2025-11-26 13:55:19,075 | INFO     | mean y: 2968233.445019405
[2025-11-26 08:56:11] 2025-11-26 13:55:19,075 | INFO     | intersect: -5248077587.728561
[2025-11-26 08:56:11] 2025-11-26 13:55:19,077 | INFO     | chi2: 11.2544928066834
[2025-11-26 08:56:11] 2025-11-26 13:55:19,080 | INFO     | sum of square deviations: 3842069832447.066
[2025-11-26 08:56:11] 2025-11-26 13:55:19,172 | INFO     | sum of deviations: 12338231635033.064
[2025-11-26 08:56:11] 2025-11-26 13:55:19,173 | INFO     | mean x: 1764094401.5816767
[2025-11-26 08:56:11] 2025-11-26 13:55:19,173 | INFO     | mean y: 2973289.713915298
[2025-11-26 08:56:11] 2025-11-26 13:55:19,173 | INFO     | intersect: -5662151578.387932
[2025-11-26 08:56:11] 2025-11-26 13:55:19,175 | INFO     | chi2: 7.956288886518896
[2025-11-26 08:56:11] 2025-11-26 13:55:19,175 | INFO     | current chi2=7.956288886518896 (change=29.305664651594864 %)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,178 | INFO     | sum of square deviations: 3817219514717.848
[2025-11-26 08:56:11] 2025-11-26 13:55:19,268 | INFO     | sum of deviations: 12764939935482.916
[2025-11-26 08:56:11] 2025-11-26 13:55:19,269 | INFO     | mean x: 1764094249.0861845
[2025-11-26 08:56:11] 2025-11-26 13:55:19,269 | INFO     | mean y: 2975908.241663058
[2025-11-26 08:56:11] 2025-11-26 13:55:19,269 | INFO     | intersect: -5896228222.747501
[2025-11-26 08:56:11] 2025-11-26 13:55:19,271 | INFO     | chi2: 6.937767674581327
[2025-11-26 08:56:11] 2025-11-26 13:55:19,271 | INFO     | current chi2=6.937767674581327 (change=12.801460913056435 %)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,271 | INFO     | right removable region: 2308
[2025-11-26 08:56:11] 2025-11-26 13:55:19,274 | INFO     | sum of square deviations: 3842066894077.063
[2025-11-26 08:56:11] 2025-11-26 13:55:19,407 | INFO     | sum of deviations: 10618461973089.924
[2025-11-26 08:56:11] 2025-11-26 13:55:19,407 | INFO     | mean x: 1764094706.5816767
[2025-11-26 08:56:11] 2025-11-26 13:55:19,408 | INFO     | mean y: 2973684.0453759725
[2025-11-26 08:56:11] 2025-11-26 13:55:19,408 | INFO     | intersect: -4872519917.496024
[2025-11-26 08:56:11] 2025-11-26 13:55:19,410 | INFO     | chi2: 7.6825695805053265
[2025-11-26 08:56:11] 2025-11-26 13:55:19,411 | INFO     | current chi2=7.6825695805053265 (change=31.737753868898583 %)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,414 | INFO     | sum of square deviations: 3817213637977.8506
[2025-11-26 08:56:11] 2025-11-26 13:55:19,509 | INFO     | sum of deviations: 10035635656989.033
[2025-11-26 08:56:11] 2025-11-26 13:55:19,510 | INFO     | mean x: 1764094859.0861845
[2025-11-26 08:56:11] 2025-11-26 13:55:19,510 | INFO     | mean y: 2977260.1706366395
[2025-11-26 08:56:11] 2025-11-26 13:55:19,510 | INFO     | intersect: -4634911773.34305
[2025-11-26 08:56:11] 2025-11-26 13:55:19,512 | INFO     | chi2: 6.322209775025045
[2025-11-26 08:56:11] 2025-11-26 13:55:19,512 | INFO     | current chi2=6.322209775025045 (change=17.707093846988663 %)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,512 | INFO     | left removable region: 20
[2025-11-26 08:56:11] 2025-11-26 13:55:19,514 | INFO     | sum of square deviations: 3714007339513.8564
[2025-11-26 08:56:11] 2025-11-26 13:55:19,611 | INFO     | sum of deviations: 10941117277697.305
[2025-11-26 08:56:11] 2025-11-26 13:55:19,611 | INFO     | mean x: 1764094828.6027098
[2025-11-26 08:56:11] 2025-11-26 13:55:19,611 | INFO     | mean y: 2988077.4645979023
[2025-11-26 08:56:11] 2025-11-26 13:55:19,611 | INFO     | intersect: -5193869829.458115
[2025-11-26 08:56:11] 2025-11-26 13:55:19,614 | INFO     | chi2: 1.6361262802506262
[2025-11-26 08:56:11] 2025-11-26 13:55:19,614 | INFO     | current memory leak: 2.95 B/s (using 2288 data points, chi2=1.64)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,616 | INFO     | could have reported an average CPU frequency of 2952 MHz (80 samples)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,616 | INFO     | ..............................
[2025-11-26 08:56:11] 2025-11-26 13:55:19,616 | INFO     | . Timing measurements:
[2025-11-26 08:56:11] 2025-11-26 13:55:19,616 | INFO     | . get job = 0 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,616 | INFO     | . initial setup = 3 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,616 | INFO     | . payload setup = 10 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,617 | INFO     | . stage-in = 0 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,617 | INFO     | . payload execution = 141453 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,617 | INFO     | . stage-out = 4 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,617 | INFO     | . log creation = 1 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,617 | INFO     | ..............................
[2025-11-26 08:56:11] 2025-11-26 13:55:19,705 | INFO     | 
[2025-11-26 08:56:11] 2025-11-26 13:55:19,705 | INFO     | job summary report
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | --------------------------------------------------
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | PanDA job id: 6895362323
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | task id: 47556137
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | errors: (none)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | pilot state: finished 
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | transexitcode: 0
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | exeerrorcode: 0
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | exeerrordiag: 
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | exitcode: 0
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | exitmsg: OK
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | cpuconsumptiontime: 258258 s
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | nevents: 1000
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | neventsw: 0
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | pid: 3407429
[2025-11-26 08:56:11] 2025-11-26 13:55:19,706 | INFO     | pgrp: 3407429
[2025-11-26 08:56:11] 2025-11-26 13:55:19,707 | INFO     | corecount: 8
[2025-11-26 08:56:11] 2025-11-26 13:55:19,707 | INFO     | event service: False
[2025-11-26 08:56:11] 2025-11-26 13:55:19,707 | INFO     | sizes: {0: 2284139, 1: 2284338, 11: 2284338, 15: 2284628, 22: 2284656, 141466: 2374575, 141467: 2374702, 141471: 2383757, 141475: 2383813, 141486: 2384059}
[2025-11-26 08:56:11] 2025-11-26 13:55:19,707 | INFO     | --------------------------------------------------
[2025-11-26 08:56:11] 2025-11-26 13:55:19,707 | INFO     | 
[2025-11-26 08:56:11] 2025-11-26 13:55:19,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 08:56:11] 2025-11-26 13:55:19,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | job 6895362323 has completed (purged errors)
[2025-11-26 08:56:11] 2025-11-26 13:55:19,731 | INFO     | overall cleanup function is called
[2025-11-26 08:56:11] 2025-11-26 13:55:20,754 | INFO     | --- collectZombieJob: --- 10, [3407429]
[2025-11-26 08:56:11] 2025-11-26 13:55:20,754 | INFO     | zombie collector waiting for pid 3407429
[2025-11-26 08:56:11] 2025-11-26 13:55:20,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:56:11] 2025-11-26 13:55:20,754 | INFO     | collected zombie processes
[2025-11-26 08:56:11] 2025-11-26 13:55:20,754 | INFO     | will attempt to kill all subprocesses of pid=3407429
[2025-11-26 08:56:11] 2025-11-26 13:55:21,104 | INFO     | process IDs to be killed: [3407429] (in reverse order)
[2025-11-26 08:56:11] 2025-11-26 13:55:21,224 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:56:11] 2025-11-26 13:55:21,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:56:11] 2025-11-26 13:55:21,238 | INFO     | did not find any defunct processes belonging to 3407429
[2025-11-26 08:56:11] 2025-11-26 13:55:21,252 | INFO     | did not find any defunct processes belonging to 3407429
[2025-11-26 08:56:11] 2025-11-26 13:55:21,254 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:56:11] 2025-11-26 13:55:21,254 | INFO     | ready for new job
[2025-11-26 08:56:11] 2025-11-26 13:55:21,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:56:11] 2025-11-26 13:55:21,262 | INFO     | ***************************************
[2025-11-26 08:56:11] 2025-11-26 13:55:21,262 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:56:11] 2025-11-26 13:55:21,263 | INFO     | ***************************************
[2025-11-26 08:56:11] 2025-11-26 13:55:21,263 | INFO     | 
[2025-11-26 08:56:11] 2025-11-26 13:55:21,265 | INFO     | architecture information:
[2025-11-26 08:56:11] 2025-11-26 13:55:21,266 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:56:11] 2025-11-26 13:55:21,287 | INFO     | cat /etc/os-release:
[2025-11-26 08:56:11] NAME="CentOS Linux"
[2025-11-26 08:56:11] VERSION="7 (Core)"
[2025-11-26 08:56:11] ID="centos"
[2025-11-26 08:56:11] ID_LIKE="rhel fedora"
[2025-11-26 08:56:11] VERSION_ID="7"
[2025-11-26 08:56:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:56:11] ANSI_COLOR="0;31"
[2025-11-26 08:56:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:56:11] HOME_URL="https://www.centos.org/"
[2025-11-26 08:56:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:56:11] 
[2025-11-26 08:56:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:56:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:56:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:56:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:56:11] 
[2025-11-26 08:56:11] 2025-11-26 13:55:21,288 | INFO     | ***************************************
[2025-11-26 08:56:11] 2025-11-26 13:55:21,790 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 08:56:11] 2025-11-26 13:55:21,825 | INFO     | sufficient remaining disk space (69242716160 B)
[2025-11-26 08:56:11] 2025-11-26 13:55:21,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:56:11] 2025-11-26 13:55:21,826 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:56:11] 2025-11-26 13:55:21,826 | INFO     | update_server=False
[2025-11-26 08:56:11] 2025-11-26 13:55:21,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:56:11] 2025-11-26 13:55:22,038 | INFO     | all payload control threads have been joined
[2025-11-26 08:56:11] 2025-11-26 13:55:22,164 | INFO     | all data control threads have been joined
[2025-11-26 08:56:11] 2025-11-26 13:55:22,366 | INFO     | all job control threads have been joined
[2025-11-26 08:56:11] 2025-11-26 13:55:22,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:56:11] 2025-11-26 13:55:22,492 | INFO     | aborting loop
[2025-11-26 08:56:11] 2025-11-26 13:55:22,834 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:22,838 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:22,916 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,044 | INFO     | [payload] control thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,179 | INFO     | [data] control thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:56:11] 2025-11-26 13:55:23,372 | INFO     | [job] control thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,498 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:56:11] 2025-11-26 13:55:23,820 | INFO     | [job] validate thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:23,987 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:24,111 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:24,175 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:24,249 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:24,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:56:11] 2025-11-26 13:55:25,201 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:25,731 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:27,722 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:56:11] 2025-11-26 13:55:52,208 | INFO     | PID=3396369 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:56:11] 2025-11-26 13:55:52,210 | INFO     | .. there are 32 such processes running
[2025-11-26 08:56:11] 2025-11-26 13:55:52,211 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:56:11] 2025-11-26 13:55:52,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:56:11] 2025-11-26 13:55:52,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:56:11] 2025-11-26 13:56:04,653 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:56:11] 2025-11-26 13:56:05,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944753530688)>', '<ExcThread(monitor, started 139943523383040)>']
[2025-11-26 08:56:11] 2025-11-26 13:56:06,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:56:11] 2025-11-26 13:56:06,303 | INFO     | [monitor] control thread has ended
[2025-11-26 08:56:11] 2025-11-26 13:56:10,636 | INFO     | all workflow threads have been joined
[2025-11-26 08:56:11] 2025-11-26 13:56:10,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:56:11] 2025-11-26 13:56:10,637 | INFO     | traces error code: 0
[2025-11-26 08:56:11] 2025-11-26 13:56:10,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:56:11] 2025-11-26 13:56:10,816 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:56:11] 2025-11-26 13:56:10,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:56:11] 2025-11-26 13:56:10,824 [wrapper] pilotpid: 3396369
[2025-11-26 08:56:11] 2025-11-26 13:56:10,828 [wrapper] Pilot exit status: 0
[2025-11-26 08:56:11] 2025-11-26 13:56:10,847 [wrapper] pandaids: 6895362323
[2025-11-26 08:56:11] 2025-11-26 13:56:10,925 [wrapper] cleanup supervisor_pilot 2462500 3396370
[2025-11-26 08:56:11] 2025-11-26 13:56:10,930 [wrapper] Test setup, not cleaning
[2025-11-26 08:56:11] 2025-11-26 13:56:10,934 [wrapper] apfmon messages muted
[2025-11-26 08:56:11] 2025-11-26 13:56:10,941 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:56:11] 2025-11-26 13:56:10,945 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:56:11]  *** Error codes and diagnostics ***
[2025-11-26 08:56:11]     "exeErrorCode": 0,
[2025-11-26 08:56:11]     "exeErrorDiag": "",
[2025-11-26 08:56:11]     "pilotErrorCode": 0,
[2025-11-26 08:56:11]     "pilotErrorDiag": "",
[2025-11-26 08:56:11]  *** Listing of results directory ***
[2025-11-26 08:56:11] total 1351064
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 09:56 pilot3.tar.gz
[2025-11-26 08:56:11] -rwx------. 1 boincer umatlas     36292 Nov 23 10:03 runpilot2-wrapper.sh
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 10:03 queuedata.json
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas       100 Nov 24 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:56:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 17:36 run_atlas
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas       105 Nov 24 17:36 job.xml
[2025-11-26 08:56:11] -rw-r--r--. 2 boincer umatlas 409138899 Nov 24 17:36 EVNT.47483658._000784.pool.root.1
[2025-11-26 08:56:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:36 start_atlas.sh
[2025-11-26 08:56:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 17:36 shared
[2025-11-26 08:56:11] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 17:36 input.tar.gz
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas         0 Nov 24 17:36 boinc_lockfile
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 17:36 pandaJob.out
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas        57 Nov 24 17:36 setup.sh.local
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas    991801 Nov 24 17:36 agis_schedconf.cvmfs.json
[2025-11-26 08:56:11] drwx------. 5 boincer umatlas      4096 Nov 24 17:36 pilot3
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas       533 Nov 26 08:31 boinc_task_state.xml
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas 928292590 Nov 26 08:53 HITS.47556137._007722.pool.root.1
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas      1058 Nov 26 08:54 memory_monitor_summary.json
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas   3117653 Nov 26 08:55 log.47556137._007722.job.log.tgz.1
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas      8636 Nov 26 08:55 heartbeat.json
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas        95 Nov 26 08:55 pilot_heartbeat.json
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 08:56 init_data.xml
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:56 wrapper_checkpoint.txt
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:56 boinc_mmap_file
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas      4824 Nov 26 08:56 pilotlog.txt
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas  17950867 Nov 26 08:56 log.47556137._007722.job.log.1
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas       353 Nov 26 08:56 output.list
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:56 runtime_log
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas  21084160 Nov 26 08:56 result.tar.gz
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas      9349 Nov 26 08:56 runtime_log.err
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas       664 Nov 26 08:56 KbnMDmsnQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmObIKDmALUASm.diag
[2025-11-26 08:56:11] -rw-r--r--. 1 boincer umatlas     21373 Nov 26 08:56 stderr.txt
[2025-11-26 08:56:11] HITS file was successfully produced:
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas 928292590 Nov 26 08:53 shared/HITS.pool.root.1
[2025-11-26 08:56:11]  *** Contents of shared directory: ***
[2025-11-26 08:56:11] total 1327284
[2025-11-26 08:56:11] -rw-r--r--. 2 boincer umatlas 409138899 Nov 24 17:36 ATLAS.root_0
[2025-11-26 08:56:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:36 start_atlas.sh
[2025-11-26 08:56:11] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 17:36 input.tar.gz
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas 928292590 Nov 26 08:53 HITS.pool.root.1
[2025-11-26 08:56:11] -rw-------. 1 boincer umatlas  21084160 Nov 26 08:56 result.tar.gz
08:56:13 (3387365): run_atlas exited; CPU time 262400.828354
08:56:13 (3387365): called boinc_finish(0)

</stderr_txt>
]]>

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