Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:42 (2063030): wrapper (7.7.26015): starting
04:44:42 (2063030): wrapper: running run_atlas (--nthreads 4)
[2025-11-28 04:44:42] Arguments: --nthreads 4
[2025-11-28 04:44:42] Threads: 4
[2025-11-28 04:44:42] Checking for CVMFS
[2025-11-28 04:44:42] No cvmfs_config command found, will try listing directly
[2025-11-28 04:44:42] CVMFS is ok
[2025-11-28 04:44:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 04:44:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 04:44:42] Further information can be found at the LHC@home message board.
[2025-11-28 04:44:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 04:44:42] Checking for apptainer binary...
[2025-11-28 04:44:42] which: no apptainer in ((null))
[2025-11-28 04:44:42] apptainer is not installed, using version from CVMFS
[2025-11-28 04:44:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 04:44:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-28 04:44:42] apptainer works
[2025-11-28 04:44:42] Set ATHENA_PROC_NUMBER=4
[2025-11-28 04:44:42] Set ATHENA_CORE_NUMBER=4
[2025-11-28 04:44:42] Starting ATLAS job with PandaID=6895375050
[2025-11-28 04:44:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 21:08:33]  *** The last 200 lines of the pilot log: ***
[2025-11-28 21:08:33] 2025-11-28 20:07:46,547 | INFO     | time since job start (58973s) is within the limit (172800.0s)
[2025-11-28 21:08:33] 2025-11-28 20:07:46,841 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 21:08:33] 2025-11-28 20:07:46,850 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2790.6995312500003
[2025-11-28 21:08:33] 2025-11-28 20:07:46,862 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6895375050/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 21:08:33] 2025-11-28 20:07:46,863 | INFO     | extracted standard info from prmon json
[2025-11-28 21:08:33] 2025-11-28 20:07:46,863 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 21:08:33] 2025-11-28 20:07:46,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 21:08:33] 2025-11-28 20:07:46,879 | INFO     | fitting pss+swap vs Time
[2025-11-28 21:08:33] 2025-11-28 20:07:46,881 | INFO     | sum of square deviations: 280386682268.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,898 | INFO     | sum of deviations: 654309792196.0002
[2025-11-28 21:08:33] 2025-11-28 20:07:46,898 | INFO     | mean x: 1764330984.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,898 | INFO     | mean y: 2283918.6432264736
[2025-11-28 21:08:33] 2025-11-28 20:07:46,898 | INFO     | intersect: -4114955281.7642465
[2025-11-28 21:08:33] 2025-11-28 20:07:46,900 | INFO     | chi2: 4.092727764569091
[2025-11-28 21:08:33] 2025-11-28 20:07:46,901 | INFO     | sum of square deviations: 276059801140.5
[2025-11-28 21:08:33] 2025-11-28 20:07:46,919 | INFO     | sum of deviations: 862256705538.4996
[2025-11-28 21:08:33] 2025-11-28 20:07:46,919 | INFO     | mean x: 1764330831.5
[2025-11-28 21:08:33] 2025-11-28 20:07:46,919 | INFO     | mean y: 2291241.8243243243
[2025-11-28 21:08:33] 2025-11-28 20:07:46,919 | INFO     | intersect: -5508493319.94143
[2025-11-28 21:08:33] 2025-11-28 20:07:46,921 | INFO     | chi2: 1.8512419845406922
[2025-11-28 21:08:33] 2025-11-28 20:07:46,921 | INFO     | current chi2=1.8512419845406922 (change=54.76752691525273 %)
[2025-11-28 21:08:33] 2025-11-28 20:07:46,922 | INFO     | sum of square deviations: 271777665038.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,940 | INFO     | sum of deviations: 868612678649.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,940 | INFO     | mean x: 1764330679.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,940 | INFO     | mean y: 2291465.6353187044
[2025-11-28 21:08:33] 2025-11-28 20:07:46,940 | INFO     | intersect: -5636582490.009718
[2025-11-28 21:08:33] 2025-11-28 20:07:46,941 | INFO     | chi2: 1.7881602038918667
[2025-11-28 21:08:33] 2025-11-28 20:07:46,941 | INFO     | current chi2=1.7881602038918667 (change=3.4075383540135418 %)
[2025-11-28 21:08:33] 2025-11-28 20:07:46,941 | INFO     | right removable region: 956
[2025-11-28 21:08:33] 2025-11-28 20:07:46,943 | INFO     | sum of square deviations: 276059801140.5
[2025-11-28 21:08:33] 2025-11-28 20:07:46,960 | INFO     | sum of deviations: 488188634874.99994
[2025-11-28 21:08:33] 2025-11-28 20:07:46,961 | INFO     | mean x: 1764331136.5
[2025-11-28 21:08:33] 2025-11-28 20:07:46,961 | INFO     | mean y: 2289762.773388773
[2025-11-28 21:08:33] 2025-11-28 20:07:46,961 | INFO     | intersect: -3117782067.449448
[2025-11-28 21:08:33] 2025-11-28 20:07:46,962 | INFO     | chi2: 2.4238342867527334
[2025-11-28 21:08:33] 2025-11-28 20:07:46,962 | INFO     | current chi2=2.4238342867527334 (change=40.777045868138 %)
[2025-11-28 21:08:33] 2025-11-28 20:07:46,963 | INFO     | sum of square deviations: 271777665038.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,981 | INFO     | sum of deviations: 476656556936.99976
[2025-11-28 21:08:33] 2025-11-28 20:07:46,982 | INFO     | mean x: 1764331289.0
[2025-11-28 21:08:33] 2025-11-28 20:07:46,982 | INFO     | mean y: 2290172.854754441
[2025-11-28 21:08:33] 2025-11-28 20:07:46,982 | INFO     | intersect: -3092077708.3078594
[2025-11-28 21:08:33] 2025-11-28 20:07:46,983 | INFO     | chi2: 2.421982045923385
[2025-11-28 21:08:33] 2025-11-28 20:07:46,983 | INFO     | current chi2=2.421982045923385 (change=0.0764177996603026 %)
[2025-11-28 21:08:33] 2025-11-28 20:07:46,983 | INFO     | left removable region: 20
[2025-11-28 21:08:33] 2025-11-28 20:07:46,984 | INFO     | sum of square deviations: 254276060610.0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,001 | INFO     | sum of deviations: 685570462501.0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,001 | INFO     | mean x: 1764331258.5
[2025-11-28 21:08:33] 2025-11-28 20:07:47,002 | INFO     | mean y: 2297902.341880342
[2025-11-28 21:08:33] 2025-11-28 20:07:47,002 | INFO     | intersect: -4754632002.868579
[2025-11-28 21:08:33] 2025-11-28 20:07:47,003 | INFO     | chi2: 0.09683366451657728
[2025-11-28 21:08:33] 2025-11-28 20:07:47,003 | INFO     | current memory leak: 2.70 B/s (using 936 data points, chi2=0.10)
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | could have reported an average CPU frequency of 2690 MHz (36 samples)
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | ..............................
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | . Timing measurements:
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | . get job = 0 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | . initial setup = 1 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | . payload setup = 6 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,004 | INFO     | . stage-in = 0 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,005 | INFO     | . payload execution = 58938 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,005 | INFO     | . stage-out = 2 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,005 | INFO     | . log creation = 0 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,005 | INFO     | ..............................
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | 
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | job summary report
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | --------------------------------------------------
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | PanDA job id: 6895375050
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | task id: 47556137
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | errors: (none)
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | pilot state: finished 
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | transexitcode: 0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,098 | INFO     | exeerrorcode: 0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | exeerrordiag: 
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | exitcode: 0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | exitmsg: OK
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | cpuconsumptiontime: 234150 s
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | nevents: 1000
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | neventsw: 0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | pid: 2074128
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | pgrp: 2074128
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | corecount: 4
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | event service: False
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | sizes: {0: 2284154, 1: 2284353, 5: 2284615, 11: 2284671, 58948: 2336404, 58951: 2345604, 58957: 2345794}
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | --------------------------------------------------
[2025-11-28 21:08:33] 2025-11-28 20:07:47,099 | INFO     | 
[2025-11-28 21:08:33] 2025-11-28 20:07:47,100 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-28 21:08:33] 2025-11-28 20:07:47,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 21:08:33] 2025-11-28 20:07:47,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 21:08:33] 2025-11-28 20:07:47,121 | INFO     | job 6895375050 has completed (purged errors)
[2025-11-28 21:08:33] 2025-11-28 20:07:47,121 | INFO     | overall cleanup function is called
[2025-11-28 21:08:33] 2025-11-28 20:07:48,134 | INFO     | --- collectZombieJob: --- 10, [2074128]
[2025-11-28 21:08:33] 2025-11-28 20:07:48,134 | INFO     | zombie collector waiting for pid 2074128
[2025-11-28 21:08:33] 2025-11-28 20:07:48,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 21:08:33] 2025-11-28 20:07:48,134 | INFO     | collected zombie processes
[2025-11-28 21:08:33] 2025-11-28 20:07:48,134 | INFO     | will attempt to kill all subprocesses of pid=2074128
[2025-11-28 21:08:33] 2025-11-28 20:07:48,507 | INFO     | process IDs to be killed: [2074128] (in reverse order)
[2025-11-28 21:08:33] 2025-11-28 20:07:48,612 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 21:08:33] 2025-11-28 20:07:48,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 21:08:33] 2025-11-28 20:07:48,625 | INFO     | did not find any defunct processes belonging to 2074128
[2025-11-28 21:08:33] 2025-11-28 20:07:48,637 | INFO     | did not find any defunct processes belonging to 2074128
[2025-11-28 21:08:33] 2025-11-28 20:07:48,638 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 21:08:33] 2025-11-28 20:07:48,638 | INFO     | ready for new job
[2025-11-28 21:08:33] 2025-11-28 20:07:48,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 21:08:33] 2025-11-28 20:07:48,644 | INFO     | ***************************************
[2025-11-28 21:08:33] 2025-11-28 20:07:48,644 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 21:08:33] 2025-11-28 20:07:48,644 | INFO     | ***************************************
[2025-11-28 21:08:33] 2025-11-28 20:07:48,644 | INFO     | 
[2025-11-28 21:08:33] 2025-11-28 20:07:48,648 | INFO     | architecture information:
[2025-11-28 21:08:33] 2025-11-28 20:07:48,648 | INFO     | executing command: cat /etc/os-release
[2025-11-28 21:08:33] 2025-11-28 20:07:48,663 | INFO     | cat /etc/os-release:
[2025-11-28 21:08:33] NAME="CentOS Linux"
[2025-11-28 21:08:33] VERSION="7 (Core)"
[2025-11-28 21:08:33] ID="centos"
[2025-11-28 21:08:33] ID_LIKE="rhel fedora"
[2025-11-28 21:08:33] VERSION_ID="7"
[2025-11-28 21:08:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 21:08:33] ANSI_COLOR="0;31"
[2025-11-28 21:08:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 21:08:33] HOME_URL="https://www.centos.org/"
[2025-11-28 21:08:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 21:08:33] 
[2025-11-28 21:08:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 21:08:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 21:08:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 21:08:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 21:08:33] 
[2025-11-28 21:08:33] 2025-11-28 20:07:48,663 | INFO     | ***************************************
[2025-11-28 21:08:33] 2025-11-28 20:07:49,165 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-28 21:08:33] 2025-11-28 20:07:49,180 | INFO     | sufficient remaining disk space (648868265984 B)
[2025-11-28 21:08:33] 2025-11-28 20:07:49,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 21:08:33] 2025-11-28 20:07:49,181 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 21:08:33] 2025-11-28 20:07:49,181 | INFO     | update_server=False
[2025-11-28 21:08:33] 2025-11-28 20:07:49,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 21:08:33] 2025-11-28 20:07:49,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 21:08:33] 2025-11-28 20:07:49,281 | INFO     | all data control threads have been joined
[2025-11-28 21:08:33] 2025-11-28 20:07:49,397 | INFO     | all payload control threads have been joined
[2025-11-28 21:08:33] 2025-11-28 20:07:49,639 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 21:08:33] 2025-11-28 20:07:49,639 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 21:08:33] 2025-11-28 20:07:49,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:08:33] 2025-11-28 20:07:49,639 | INFO     | will abort loop
[2025-11-28 21:08:33] 2025-11-28 20:07:50,186 | INFO     | [job] retrieve thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,286 | INFO     | [data] control thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,402 | INFO     | [payload] control thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,404 | INFO     | [payload] failed_post thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,484 | INFO     | [payload] validate_post thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,632 | INFO     | [job] validate thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,645 | INFO     | [job] job monitor thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,705 | INFO     | [data] copytool_in thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,736 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,775 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:50,804 | INFO     | all job control threads have been joined
[2025-11-28 21:08:33] 2025-11-28 20:07:51,104 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:51,186 | INFO     | [data] copytool_out thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:51,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:51,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 21:08:33] 2025-11-28 20:07:51,809 | INFO     | [job] control thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:52,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 21:08:33] 2025-11-28 20:07:53,113 | INFO     | [job] queue monitor thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:07:55,733 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 21:08:33] 2025-11-28 20:08:20,095 | INFO     | PID=2066840 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 21:08:33] 2025-11-28 20:08:20,096 | INFO     | .. there are 3 such processes running
[2025-11-28 21:08:33] 2025-11-28 20:08:20,096 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 21:08:33] 2025-11-28 20:08:20,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 21:08:33] 2025-11-28 20:08:20,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 21:08:33] 2025-11-28 20:08:26,862 | INFO     | [monitor] cgroup control has ended
[2025-11-28 21:08:33] 2025-11-28 20:08:28,195 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23054462302016)>', '<ExcThread(monitor, started 23054212081408)>']
[2025-11-28 21:08:33] 2025-11-28 20:08:29,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 21:08:33] 2025-11-28 20:08:29,141 | INFO     | [monitor] control thread has ended
[2025-11-28 21:08:33] 2025-11-28 20:08:33,220 | INFO     | all workflow threads have been joined
[2025-11-28 21:08:33] 2025-11-28 20:08:33,221 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 21:08:33] 2025-11-28 20:08:33,221 | INFO     | traces error code: 0
[2025-11-28 21:08:33] 2025-11-28 20:08:33,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 21:08:33] 2025-11-28 20:08:33,410 [wrapper] ==== pilot stdout END ====
[2025-11-28 21:08:33] 2025-11-28 20:08:33,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 21:08:33] 2025-11-28 20:08:33,417 [wrapper] pilotpid: 2066840
[2025-11-28 21:08:33] 2025-11-28 20:08:33,420 [wrapper] Pilot exit status: 0
[2025-11-28 21:08:33] 2025-11-28 20:08:33,431 [wrapper] pandaids: 6895375050
[2025-11-28 21:08:33] 2025-11-28 20:08:33,504 [wrapper] cleanup supervisor_pilot 2864938 2066841
[2025-11-28 21:08:33] 2025-11-28 20:08:33,507 [wrapper] Test setup, not cleaning
[2025-11-28 21:08:33] 2025-11-28 20:08:33,510 [wrapper] apfmon messages muted
[2025-11-28 21:08:33] 2025-11-28 20:08:33,513 [wrapper] ==== wrapper stdout END ====
[2025-11-28 21:08:33] 2025-11-28 20:08:33,515 [wrapper] ==== wrapper stderr END ====
[2025-11-28 21:08:33]  *** Error codes and diagnostics ***
[2025-11-28 21:08:33]     "exeErrorCode": 0,
[2025-11-28 21:08:33]     "exeErrorDiag": "",
[2025-11-28 21:08:33]     "pilotErrorCode": 0,
[2025-11-28 21:08:33]     "pilotErrorDiag": "",
[2025-11-28 21:08:33]  *** Listing of results directory ***
[2025-11-28 21:08:33] total 1318992
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc    576529 Nov 24 00:11 pilot3.tar.gz
[2025-11-28 21:08:33] -rwx------ 1 boinc boinc     36292 Nov 24 00:52 runpilot2-wrapper.sh
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc      5112 Nov 24 00:52 queuedata.json
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc       100 Nov 28 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 21:08:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 04:44 run_atlas
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc       105 Nov 28 04:44 job.xml
[2025-11-28 21:08:33] -rw-r--r-- 2 boinc boinc 410465527 Nov 28 04:44 EVNT.47483658._000952.pool.root.1
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc      6635 Nov 28 04:44 init_data.xml
[2025-11-28 21:08:33] -rw-r--r-- 2 boinc boinc     15847 Nov 28 04:44 start_atlas.sh
[2025-11-28 21:08:33] drwxrwx--x 2 boinc boinc      4096 Nov 28 04:44 shared
[2025-11-28 21:08:33] -rw-r--r-- 2 boinc boinc    590100 Nov 28 04:44 input.tar.gz
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc         0 Nov 28 04:44 boinc_lockfile
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc      2785 Nov 28 04:44 pandaJob.out
[2025-11-28 21:08:33] -rw------- 1 boinc boinc    991850 Nov 28 04:44 agis_schedconf.cvmfs.json
[2025-11-28 21:08:33] drwx------ 5 boinc boinc      4096 Nov 28 04:44 pilot3
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc       532 Nov 28 21:01 boinc_task_state.xml
[2025-11-28 21:08:33] -rw------- 1 boinc boinc 916336243 Nov 28 21:06 HITS.47556137._009383.pool.root.1
[2025-11-28 21:08:33] -rw------- 1 boinc boinc      1045 Nov 28 21:07 memory_monitor_summary.json
[2025-11-28 21:08:33] -rw------- 1 boinc boinc   1516240 Nov 28 21:07 agis_ddmendpoints.agis.ALL.json
[2025-11-28 21:08:33] -rw------- 1 boinc boinc   1710456 Nov 28 21:07 log.47556137._009383.job.log.tgz.1
[2025-11-28 21:08:33] -rw------- 1 boinc boinc      8628 Nov 28 21:07 heartbeat.json
[2025-11-28 21:08:33] -rw------- 1 boinc boinc        95 Nov 28 21:08 pilot_heartbeat.json
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc        28 Nov 28 21:08 wrapper_checkpoint.txt
[2025-11-28 21:08:33] -rw------- 1 boinc boinc      5019 Nov 28 21:08 pilotlog.txt
[2025-11-28 21:08:33] -rw------- 1 boinc boinc   8253380 Nov 28 21:08 log.47556137._009383.job.log.1
[2025-11-28 21:08:33] -rw------- 1 boinc boinc       353 Nov 28 21:08 output.list
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc       620 Nov 28 21:08 runtime_log
[2025-11-28 21:08:33] -rw------- 1 boinc boinc   9984000 Nov 28 21:08 result.tar.gz
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc      9206 Nov 28 21:08 runtime_log.err
[2025-11-28 21:08:33] -rw------- 1 boinc boinc       670 Nov 28 21:08 0HZMDmr3Yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLILKDmi3zw4m.diag
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc      8192 Nov 28 21:08 boinc_mmap_file
[2025-11-28 21:08:33] -rw-r--r-- 1 boinc boinc     21017 Nov 28 21:08 stderr.txt
[2025-11-28 21:08:33] HITS file was successfully produced:
[2025-11-28 21:08:33] -rw------- 1 boinc boinc 916336243 Nov 28 21:06 shared/HITS.pool.root.1
[2025-11-28 21:08:33]  *** Contents of shared directory: ***
[2025-11-28 21:08:33] total 1306064
[2025-11-28 21:08:33] -rw-r--r-- 2 boinc boinc 410465527 Nov 28 04:44 ATLAS.root_0
[2025-11-28 21:08:33] -rw-r--r-- 2 boinc boinc     15847 Nov 28 04:44 start_atlas.sh
[2025-11-28 21:08:33] -rw-r--r-- 2 boinc boinc    590100 Nov 28 04:44 input.tar.gz
[2025-11-28 21:08:33] -rw------- 1 boinc boinc 916336243 Nov 28 21:06 HITS.pool.root.1
[2025-11-28 21:08:33] -rw------- 1 boinc boinc   9984000 Nov 28 21:08 result.tar.gz
21:08:35 (2063030): run_atlas exited; CPU time 236403.181262
21:08:35 (2063030): called boinc_finish(0)

</stderr_txt>
]]>

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