Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:24:49 (2925034): wrapper (7.7.26015): starting
18:24:49 (2925034): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 18:24:49] Arguments: --nthreads 9
[2025-11-24 18:24:49] Threads: 9
[2025-11-24 18:24:49] Checking for CVMFS
[2025-11-24 18:24:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:24:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:24:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:24:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:24:50] 2.13.3.0 11066 27828 328240 153263 0 121 31947279 32935936 22741 16776704 0 78130915 99.444 108755919 38790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 18:24:50] CVMFS is ok
[2025-11-24 18:24:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:24:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:24:50] Further information can be found at the LHC@home message board.
[2025-11-24 18:24:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:24:50] Checking for apptainer binary...
[2025-11-24 18:24:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:24:50] Running /usr/bin/apptainer --version
[2025-11-24 18:24:50] apptainer version 1.4.4-1.el9
[2025-11-24 18:24:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:25:10] c6-1-24-4.aglt2.org
[2025-11-24 18:25:10] apptainer works
[2025-11-24 18:25:10] Set ATHENA_PROC_NUMBER=9
[2025-11-24 18:25:10] Set ATHENA_CORE_NUMBER=9
[2025-11-24 18:25:10] Starting ATLAS job with PandaID=6895375027
[2025-11-24 18:25:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:02:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:02:23] 2025-11-26 04:01:05,053 | INFO     | monitor loop #6100: job 0:6895375027 is in state 'finished'
[2025-11-25 23:02:23] 2025-11-26 04:01:05,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:02:23] 2025-11-26 04:01:06,165 | INFO     | time since job start (102900s) is within the limit (172800.0s)
[2025-11-25 23:02:23] 2025-11-26 04:01:07,558 | INFO     | monitor loop #6101: job 0:6895375027 is in state 'finished'
[2025-11-25 23:02:23] 2025-11-26 04:01:07,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:02:23] 2025-11-26 04:01:08,172 | INFO     | time since job start (102902s) is within the limit (172800.0s)
[2025-11-25 23:02:23] 2025-11-26 04:01:10,066 | INFO     | monitor loop #6102: job 0:6895375027 is in state 'finished'
[2025-11-25 23:02:23] 2025-11-26 04:01:10,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:02:23] 2025-11-26 04:01:10,178 | INFO     | time since job start (102904s) is within the limit (172800.0s)
[2025-11-25 23:02:23] 2025-11-26 04:01:12,187 | INFO     | time since job start (102906s) is within the limit (172800.0s)
[2025-11-25 23:02:23] 2025-11-26 04:01:12,577 | INFO     | monitor loop #6103: job 0:6895375027 is in state 'finished'
[2025-11-25 23:02:23] 2025-11-26 04:01:12,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:02:23] 2025-11-26 04:01:15,113 | INFO     | monitor loop #6104: job 0:6895375027 is in state 'finished'
[2025-11-25 23:02:23] 2025-11-26 04:01:15,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:02:23] 2025-11-26 04:01:15,265 | INFO     | PID=2929609 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:02:23] 2025-11-26 04:01:15,265 | INFO     | .. there are 34 such processes running
[2025-11-25 23:02:23] 2025-11-26 04:01:16,276 | INFO     | time since job start (102910s) is within the limit (172800.0s)
[2025-11-25 23:02:23] 2025-11-26 04:01:16,531 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 23:02:23] 2025-11-26 04:01:16,534 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2869.6878928571427
[2025-11-25 23:02:23] 2025-11-26 04:01:16,581 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895375027/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:02:23] 2025-11-26 04:01:16,582 | INFO     | extracted standard info from prmon json
[2025-11-25 23:02:23] 2025-11-26 04:01:16,582 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:02:23] 2025-11-26 04:01:16,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:02:23] 2025-11-26 04:01:16,607 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:02:23] 2025-11-26 04:01:16,609 | INFO     | sum of square deviations: 1483477096467.9924
[2025-11-25 23:02:23] 2025-11-26 04:01:16,657 | INFO     | sum of deviations: 5043734365247.534
[2025-11-25 23:02:23] 2025-11-26 04:01:16,657 | INFO     | mean x: 1764078234.797626
[2025-11-25 23:02:23] 2025-11-26 04:01:16,657 | INFO     | mean y: 3105936.2860534126
[2025-11-25 23:02:23] 2025-11-26 04:01:16,657 | INFO     | intersect: -5994655698.873757
[2025-11-25 23:02:23] 2025-11-26 04:01:16,659 | INFO     | chi2: 22.035153713710567
[2025-11-25 23:02:23] 2025-11-26 04:01:16,661 | INFO     | sum of square deviations: 1470311738488.7385
[2025-11-25 23:02:23] 2025-11-26 04:01:16,708 | INFO     | sum of deviations: 5655751376755.51
[2025-11-25 23:02:23] 2025-11-26 04:01:16,708 | INFO     | mean x: 1764078082.3059523
[2025-11-25 23:02:23] 2025-11-26 04:01:16,708 | INFO     | mean y: 3113024.069047619
[2025-11-25 23:02:23] 2025-11-26 04:01:16,709 | INFO     | intersect: -6782650009.395659
[2025-11-25 23:02:23] 2025-11-26 04:01:16,710 | INFO     | chi2: 18.749073421984058
[2025-11-25 23:02:23] 2025-11-26 04:01:16,711 | INFO     | current chi2=18.749073421984058 (change=14.912899335400901 %)
[2025-11-25 23:02:23] 2025-11-26 04:01:16,711 | INFO     | right removable region: 1679
[2025-11-25 23:02:23] 2025-11-26 04:01:16,712 | INFO     | sum of square deviations: 1470308862948.7395
[2025-11-25 23:02:23] 2025-11-26 04:01:16,760 | INFO     | sum of deviations: 4348766426609.142
[2025-11-25 23:02:23] 2025-11-26 04:01:16,760 | INFO     | mean x: 1764078387.3059523
[2025-11-25 23:02:23] 2025-11-26 04:01:16,760 | INFO     | mean y: 3113984.285714286
[2025-11-25 23:02:23] 2025-11-26 04:01:16,760 | INFO     | intersect: -5214541338.309172
[2025-11-25 23:02:23] 2025-11-26 04:01:16,762 | INFO     | chi2: 18.32742245116151
[2025-11-25 23:02:23] 2025-11-26 04:01:16,762 | INFO     | current chi2=18.32742245116151 (change=16.826437022955993 %)
[2025-11-25 23:02:23] 2025-11-26 04:01:16,762 | INFO     | left removable region: 10
[2025-11-25 23:02:23] 2025-11-26 04:01:16,764 | INFO     | sum of square deviations: 1441616826860.2117
[2025-11-25 23:02:23] 2025-11-26 04:01:16,834 | INFO     | sum of deviations: 4579202391925.209
[2025-11-25 23:02:23] 2025-11-26 04:01:16,834 | INFO     | mean x: 1764078356.8238466
[2025-11-25 23:02:23] 2025-11-26 04:01:16,835 | INFO     | mean y: 3128283.9191132416
[2025-11-25 23:02:23] 2025-11-26 04:01:16,835 | INFO     | intersect: -5600352253.07281
[2025-11-25 23:02:23] 2025-11-26 04:01:16,836 | INFO     | chi2: 12.662271275299823
[2025-11-25 23:02:23] 2025-11-26 04:01:16,837 | INFO     | current memory leak: 3.18 B/s (using 1669 data points, chi2=12.66)
[2025-11-25 23:02:23] 2025-11-26 04:01:16,843 | INFO     | could have reported an average CPU frequency of 2942 MHz (59 samples)
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | ..............................
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . Timing measurements:
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . get job = 0 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . initial setup = 5 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . payload setup = 37 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . stage-in = 0 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . payload execution = 102781 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . stage-out = 8 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | . log creation = 1 s
[2025-11-25 23:02:23] 2025-11-26 04:01:16,844 | INFO     | ..............................
[2025-11-25 23:02:23] 2025-11-26 04:01:17,460 | INFO     | 
[2025-11-25 23:02:23] 2025-11-26 04:01:17,460 | INFO     | job summary report
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | --------------------------------------------------
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | PanDA job id: 6895375027
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | task id: 47556137
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | errors: (none)
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | pilot state: finished 
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | transexitcode: 0
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | exeerrorcode: 0
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | exeerrordiag: 
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | exitcode: 0
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | exitmsg: OK
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | cpuconsumptiontime: 249669 s
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | nevents: 1000
[2025-11-25 23:02:23] 2025-11-26 04:01:17,461 | INFO     | neventsw: 0
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | pid: 2938474
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | pgrp: 2938474
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | corecount: 9
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | event service: False
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 21: 2284628, 22: 2284656, 102822: 2355971, 102823: 2356098, 102832: 2365209, 102866: 2365399}
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | --------------------------------------------------
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | 
[2025-11-25 23:02:23] 2025-11-26 04:01:17,462 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:02:23] 2025-11-26 04:01:17,528 | INFO     | job 6895375027 has completed (purged errors)
[2025-11-25 23:02:23] 2025-11-26 04:01:17,529 | INFO     | overall cleanup function is called
[2025-11-25 23:02:23] 2025-11-26 04:01:18,571 | INFO     | --- collectZombieJob: --- 10, [2938474]
[2025-11-25 23:02:23] 2025-11-26 04:01:18,571 | INFO     | zombie collector waiting for pid 2938474
[2025-11-25 23:02:23] 2025-11-26 04:01:18,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:02:23] 2025-11-26 04:01:18,572 | INFO     | collected zombie processes
[2025-11-25 23:02:23] 2025-11-26 04:01:18,572 | INFO     | will attempt to kill all subprocesses of pid=2938474
[2025-11-25 23:02:23] 2025-11-26 04:01:19,202 | INFO     | process IDs to be killed: [2938474] (in reverse order)
[2025-11-25 23:02:23] 2025-11-26 04:01:19,602 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:02:23] 2025-11-26 04:01:19,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:02:23] 2025-11-26 04:01:19,641 | INFO     | did not find any defunct processes belonging to 2938474
[2025-11-25 23:02:23] 2025-11-26 04:01:19,672 | INFO     | did not find any defunct processes belonging to 2938474
[2025-11-25 23:02:23] 2025-11-26 04:01:19,677 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:02:23] 2025-11-26 04:01:19,678 | INFO     | ready for new job
[2025-11-25 23:02:23] 2025-11-26 04:01:19,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:02:23] 2025-11-26 04:01:19,688 | INFO     | ***************************************
[2025-11-25 23:02:23] 2025-11-26 04:01:19,689 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:02:23] 2025-11-26 04:01:19,689 | INFO     | ***************************************
[2025-11-25 23:02:23] 2025-11-26 04:01:19,689 | INFO     | 
[2025-11-25 23:02:23] 2025-11-26 04:01:19,696 | INFO     | architecture information:
[2025-11-25 23:02:23] 2025-11-26 04:01:19,697 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:02:23] 2025-11-26 04:01:19,746 | INFO     | cat /etc/os-release:
[2025-11-25 23:02:23] NAME="CentOS Linux"
[2025-11-25 23:02:23] VERSION="7 (Core)"
[2025-11-25 23:02:23] ID="centos"
[2025-11-25 23:02:23] ID_LIKE="rhel fedora"
[2025-11-25 23:02:23] VERSION_ID="7"
[2025-11-25 23:02:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:02:23] ANSI_COLOR="0;31"
[2025-11-25 23:02:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:02:23] HOME_URL="https://www.centos.org/"
[2025-11-25 23:02:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:02:23] 
[2025-11-25 23:02:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:02:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:02:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:02:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:02:23] 
[2025-11-25 23:02:23] 2025-11-26 04:01:19,746 | INFO     | ***************************************
[2025-11-25 23:02:23] 2025-11-26 04:01:20,249 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 23:02:23] 2025-11-26 04:01:20,299 | INFO     | sufficient remaining disk space (66457698304 B)
[2025-11-25 23:02:23] 2025-11-26 04:01:20,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:02:23] 2025-11-26 04:01:20,299 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:02:23] 2025-11-26 04:01:20,299 | INFO     | update_server=False
[2025-11-25 23:02:23] 2025-11-26 04:01:20,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:02:23] 2025-11-26 04:01:20,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:02:23] 2025-11-26 04:01:21,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:02:23] 2025-11-26 04:01:21,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:02:23] 2025-11-26 04:01:21,159 | INFO     | aborting loop
[2025-11-25 23:02:23] 2025-11-26 04:01:21,233 | INFO     | all data control threads have been joined
[2025-11-25 23:02:23] 2025-11-26 04:01:21,305 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:21,410 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:21,549 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:21,559 | INFO     | all payload control threads have been joined
[2025-11-25 23:02:23] 2025-11-26 04:01:21,734 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:21,893 | INFO     | all job control threads have been joined
[2025-11-25 23:02:23] 2025-11-26 04:01:22,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:02:23] 2025-11-26 04:01:22,165 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,239 | INFO     | [data] control thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,450 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,565 | INFO     | [payload] control thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,619 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,619 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,625 | INFO     | [job] validate thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,898 | INFO     | [job] control thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:22,978 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:23,122 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:25,073 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:02:23] 2025-11-26 04:01:51,807 | INFO     | PID=2929609 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:02:23] 2025-11-26 04:01:51,807 | INFO     | .. there are 33 such processes running
[2025-11-25 23:02:23] 2025-11-26 04:01:51,808 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:02:23] 2025-11-26 04:01:51,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:02:23] 2025-11-26 04:01:51,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:02:23] 2025-11-26 04:02:14,993 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:02:23] 2025-11-26 04:02:15,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428545300288)>', '<ExcThread(monitor, started 140427906770688)>']
[2025-11-25 23:02:23] 2025-11-26 04:02:16,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:02:23] 2025-11-26 04:02:16,006 | INFO     | [monitor] control thread has ended
[2025-11-25 23:02:23] 2025-11-26 04:02:20,748 | INFO     | all workflow threads have been joined
[2025-11-25 23:02:23] 2025-11-26 04:02:20,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:02:23] 2025-11-26 04:02:20,749 | INFO     | traces error code: 0
[2025-11-25 23:02:23] 2025-11-26 04:02:20,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:02:23] 2025-11-26 04:02:21,886 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:02:23] 2025-11-26 04:02:21,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:02:23] 2025-11-26 04:02:21,929 [wrapper] pilotpid: 2929609
[2025-11-25 23:02:23] 2025-11-26 04:02:21,945 [wrapper] Pilot exit status: 0
[2025-11-25 23:02:23] 2025-11-26 04:02:22,098 [wrapper] pandaids: 6895375027
[2025-11-25 23:02:23] 2025-11-26 04:02:22,566 [wrapper] cleanup supervisor_pilot   11428 2929610
[2025-11-25 23:02:23] 2025-11-26 04:02:22,615 [wrapper] Test setup, not cleaning
[2025-11-25 23:02:23] 2025-11-26 04:02:22,652 [wrapper] apfmon messages muted
[2025-11-25 23:02:23] 2025-11-26 04:02:22,680 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:02:23] 2025-11-26 04:02:22,701 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:02:23]  *** Error codes and diagnostics ***
[2025-11-25 23:02:23]     "exeErrorCode": 0,
[2025-11-25 23:02:23]     "exeErrorDiag": "",
[2025-11-25 23:02:23]     "pilotErrorCode": 0,
[2025-11-25 23:02:23]     "pilotErrorDiag": "",
[2025-11-25 23:02:23]  *** Listing of results directory ***
[2025-11-25 23:02:23] total 1322496
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-25 23:02:23] -rwx------. 1 boincer umatlas     36292 Nov 23 18:41 runpilot2-wrapper.sh
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:41 queuedata.json
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas       100 Nov 24 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:02:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 18:24 run_atlas
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas       105 Nov 24 18:24 job.xml
[2025-11-25 23:02:23] -rw-r--r--. 2 boincer umatlas 408314781 Nov 24 18:24 EVNT.47483658._000949.pool.root.1
[2025-11-25 23:02:23] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 18:24 input.tar.gz
[2025-11-25 23:02:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:24 start_atlas.sh
[2025-11-25 23:02:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 18:24 shared
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas         0 Nov 24 18:24 boinc_lockfile
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 18:25 pandaJob.out
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas        57 Nov 24 18:25 setup.sh.local
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas    991801 Nov 24 18:26 agis_schedconf.cvmfs.json
[2025-11-25 23:02:23] drwx------. 5 boincer umatlas      4096 Nov 24 18:26 pilot3
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas       533 Nov 25 22:03 boinc_task_state.xml
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas 910810934 Nov 25 22:58 HITS.47556137._009360.pool.root.1
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas      1070 Nov 25 23:00 memory_monitor_summary.json
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas      6846 Nov 25 23:00 init_data.xml
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas   2743511 Nov 25 23:00 log.47556137._009360.job.log.tgz.1
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas        95 Nov 25 23:01 pilot_heartbeat.json
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas      8652 Nov 25 23:01 heartbeat.json
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas      4824 Nov 25 23:02 pilotlog.txt
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas  12862756 Nov 25 23:02 log.47556137._009360.job.log.1
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:02 boinc_mmap_file
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:02 wrapper_checkpoint.txt
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas       353 Nov 25 23:02 output.list
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:02 runtime_log
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas  15626240 Nov 25 23:02 result.tar.gz
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas      9349 Nov 25 23:02 runtime_log.err
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas       667 Nov 25 23:02 maFODmysYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzpIKDmDMjQim.diag
[2025-11-25 23:02:23] -rw-r--r--. 1 boincer umatlas      2144 Nov 25 23:02 stderr.txt
[2025-11-25 23:02:23] HITS file was successfully produced:
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas 910810934 Nov 25 22:58 shared/HITS.pool.root.1
[2025-11-25 23:02:23]  *** Contents of shared directory: ***
[2025-11-25 23:02:23] total 1304072
[2025-11-25 23:02:23] -rw-r--r--. 2 boincer umatlas 408314781 Nov 24 18:24 ATLAS.root_0
[2025-11-25 23:02:23] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 18:24 input.tar.gz
[2025-11-25 23:02:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:24 start_atlas.sh
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas 910810934 Nov 25 22:58 HITS.pool.root.1
[2025-11-25 23:02:23] -rw-------. 1 boincer umatlas  15626240 Nov 25 23:02 result.tar.gz
23:02:45 (2925034): run_atlas exited; CPU time 252287.339322
23:02:45 (2925034): called boinc_finish(0)

</stderr_txt>
]]>

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