Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:28:17 (23144): wrapper (7.7.26015): starting
17:28:17 (23144): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 17:28:17] Arguments: --nthreads 12
[2025-11-24 17:28:17] Threads: 12
[2025-11-24 17:28:17] Checking for CVMFS
[2025-11-24 17:28:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:28:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:28:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:28:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:28:17] 2.11.2.0 3165 71022 92888 153261 2 81 14786456 20275201 1 130560 0 29684825 99.931 3438848 35846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 17:28:17] CVMFS is ok
[2025-11-24 17:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:28:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:28:17] Further information can be found at the LHC@home message board.
[2025-11-24 17:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:28:17] Checking for apptainer binary...
[2025-11-24 17:28:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:28:17] Running /usr/bin/apptainer --version
[2025-11-24 17:28:17] apptainer version 1.3.2-1.el7
[2025-11-24 17:28:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:28:18] c-115-40.aglt2.org
[2025-11-24 17:28:18] apptainer works
[2025-11-24 17:28:18] Set ATHENA_PROC_NUMBER=12
[2025-11-24 17:28:18] Set ATHENA_CORE_NUMBER=12
[2025-11-24 17:28:18] Starting ATLAS job with PandaID=6894053170
[2025-11-24 17:28:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 19:22:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 19:22:49] 2025-11-25 00:21:58,492 | INFO     | total number of processed events: 400 (read)
[2025-11-24 19:22:49] 2025-11-25 00:21:58,492 | INFO     | executing command: lscpu
[2025-11-24 19:22:49] 2025-11-25 00:21:58,517 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-24 19:22:49] 2025-11-25 00:21:59,342 | INFO     | monitor loop #509: job 0:6894053170 is in state 'finished'
[2025-11-24 19:22:49] 2025-11-25 00:21:59,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:22:49] 2025-11-25 00:22:00,483 | INFO     | time since job start (6807s) is within the limit (172800.0s)
[2025-11-24 19:22:49] 2025-11-25 00:22:01,858 | INFO     | monitor loop #510: job 0:6894053170 is in state 'finished'
[2025-11-24 19:22:49] 2025-11-25 00:22:01,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 19:22:49] 2025-11-25 00:22:02,488 | INFO     | time since job start (6809s) is within the limit (172800.0s)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,101 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 19:22:49] 2025-11-25 00:22:03,104 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-24 19:22:49] 2025-11-25 00:22:03,106 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894053170/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,107 | INFO     | extracted standard info from prmon json
[2025-11-24 19:22:49] 2025-11-25 00:22:03,107 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 19:22:49] 2025-11-25 00:22:03,107 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 19:22:49] 2025-11-25 00:22:03,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 19:22:49] 2025-11-25 00:22:03,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 19:22:49] 2025-11-25 00:22:03,111 | INFO     | fitting pss+swap vs Time
[2025-11-24 19:22:49] 2025-11-25 00:22:03,112 | INFO     | sum of square deviations: 424045160.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,112 | INFO     | sum of deviations: 3196067549.9999967
[2025-11-24 19:22:49] 2025-11-25 00:22:03,113 | INFO     | mean x: 1764026698.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,113 | INFO     | mean y: 2803539.864864865
[2025-11-24 19:22:49] 2025-11-25 00:22:03,113 | INFO     | intersect: -13292828667.826042
[2025-11-24 19:22:49] 2025-11-25 00:22:03,113 | INFO     | chi2: 1.6499380476837624
[2025-11-24 19:22:49] 2025-11-25 00:22:03,114 | INFO     | sum of square deviations: 369281342.5
[2025-11-24 19:22:49] 2025-11-25 00:22:03,114 | INFO     | sum of deviations: 3388004965.0000005
[2025-11-24 19:22:49] 2025-11-25 00:22:03,114 | INFO     | mean x: 1764026545.5
[2025-11-24 19:22:49] 2025-11-25 00:22:03,114 | INFO     | mean y: 2804072.5283018867
[2025-11-24 19:22:49] 2025-11-25 00:22:03,114 | INFO     | intersect: -16181416484.311228
[2025-11-24 19:22:49] 2025-11-25 00:22:03,115 | INFO     | chi2: 1.652614242942413
[2025-11-24 19:22:49] 2025-11-25 00:22:03,115 | INFO     | current chi2=1.652614242942413 (change=-0.16219974213017488 %)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,115 | INFO     | right removable region: 105
[2025-11-24 19:22:49] 2025-11-25 00:22:03,115 | INFO     | sum of square deviations: 369281342.5
[2025-11-24 19:22:49] 2025-11-25 00:22:03,116 | INFO     | sum of deviations: -16816852161.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,116 | INFO     | mean x: 1764026850.5
[2025-11-24 19:22:49] 2025-11-25 00:22:03,116 | INFO     | mean y: 2858294.830188679
[2025-11-24 19:22:49] 2025-11-25 00:22:03,116 | INFO     | intersect: 80335589301.65854
[2025-11-24 19:22:49] 2025-11-25 00:22:03,116 | INFO     | chi2: 0.08876767510750724
[2025-11-24 19:22:49] 2025-11-25 00:22:03,116 | INFO     | current chi2=0.08876767510750724 (change=94.61993889818334 %)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,117 | INFO     | sum of square deviations: 319447850.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,117 | INFO     | sum of deviations: -15641781284.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,117 | INFO     | mean x: 1764027003.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,117 | INFO     | mean y: 2854601.99009901
[2025-11-24 19:22:49] 2025-11-25 00:22:03,118 | INFO     | intersect: 86378532384.75186
[2025-11-24 19:22:49] 2025-11-25 00:22:03,118 | INFO     | chi2: 0.08192073241016848
[2025-11-24 19:22:49] 2025-11-25 00:22:03,118 | INFO     | current chi2=0.08192073241016848 (change=7.7133288542776155 %)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,118 | INFO     | left removable region: 20
[2025-11-24 19:22:49] 2025-11-25 00:22:03,118 | INFO     | sum of square deviations: 190403570.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,119 | INFO     | sum of deviations: -9382110490.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,119 | INFO     | mean x: 1764027125.0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,119 | INFO     | mean y: 2837692.623529412
[2025-11-24 19:22:49] 2025-11-25 00:22:03,119 | INFO     | intersect: 86925038752.75618
[2025-11-24 19:22:49] 2025-11-25 00:22:03,119 | INFO     | chi2: 0.07330268677355073
[2025-11-24 19:22:49] 2025-11-25 00:22:03,119 | INFO     | current memory leak: -49.27 B/s (using 85 data points, chi2=0.07)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | could have reported an average CPU frequency of 2274 MHz (7 samples)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | ..............................
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | . Timing measurements:
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | . get job = 0 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | . initial setup = 2 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | . payload setup = 8 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,120 | INFO     | . stage-in = 0 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,121 | INFO     | . payload execution = 6771 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,121 | INFO     | . stage-out = 0 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,121 | INFO     | . log creation = 0 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,121 | INFO     | ..............................
[2025-11-24 19:22:49] 2025-11-25 00:22:03,195 | INFO     | 
[2025-11-24 19:22:49] 2025-11-25 00:22:03,195 | INFO     | job summary report
[2025-11-24 19:22:49] 2025-11-25 00:22:03,195 | INFO     | --------------------------------------------------
[2025-11-24 19:22:49] 2025-11-25 00:22:03,195 | INFO     | PanDA job id: 6894053170
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | task id: 47523618
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | errors: (none)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | pilot state: finished 
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | transexitcode: 0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | exeerrorcode: 0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | exeerrordiag: 
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | exitcode: 0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | exitmsg: OK
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | cpuconsumptiontime: 75475 s
[2025-11-24 19:22:49] 2025-11-25 00:22:03,196 | INFO     | nevents: 400
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | neventsw: 0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | pid: 835
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | pgrp: 835
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | corecount: 12
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | event service: False
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | sizes: {0: 2283944, 5: 2284206, 11: 2284262, 6782: 2311409, 6783: 2311408, 6784: 2320462, 6787: 2320646, 6794: 2320840}
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | --------------------------------------------------
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | 
[2025-11-24 19:22:49] 2025-11-25 00:22:03,197 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 19:22:49] 2025-11-25 00:22:03,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 19:22:49] 2025-11-25 00:22:03,223 | INFO     | job 6894053170 has completed (purged errors)
[2025-11-24 19:22:49] 2025-11-25 00:22:03,223 | INFO     | overall cleanup function is called
[2025-11-24 19:22:49] 2025-11-25 00:22:04,231 | INFO     | --- collectZombieJob: --- 10, [835]
[2025-11-24 19:22:49] 2025-11-25 00:22:04,231 | INFO     | zombie collector waiting for pid 835
[2025-11-24 19:22:49] 2025-11-25 00:22:04,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 19:22:49] 2025-11-25 00:22:04,232 | INFO     | collected zombie processes
[2025-11-24 19:22:49] 2025-11-25 00:22:04,232 | INFO     | will attempt to kill all subprocesses of pid=835
[2025-11-24 19:22:49] 2025-11-25 00:22:04,320 | INFO     | process IDs to be killed: [835] (in reverse order)
[2025-11-24 19:22:49] 2025-11-25 00:22:04,370 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 19:22:49] 2025-11-25 00:22:04,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 19:22:49] 2025-11-25 00:22:04,388 | INFO     | did not find any defunct processes belonging to 835
[2025-11-24 19:22:49] 2025-11-25 00:22:04,390 | INFO     | did not find any defunct processes belonging to 835
[2025-11-24 19:22:49] 2025-11-25 00:22:04,392 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 19:22:49] 2025-11-25 00:22:04,392 | INFO     | ready for new job
[2025-11-24 19:22:49] 2025-11-25 00:22:04,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 19:22:49] 2025-11-25 00:22:04,393 | INFO     | ***************************************
[2025-11-24 19:22:49] 2025-11-25 00:22:04,393 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 19:22:49] 2025-11-25 00:22:04,393 | INFO     | ***************************************
[2025-11-24 19:22:49] 2025-11-25 00:22:04,393 | INFO     | 
[2025-11-24 19:22:49] 2025-11-25 00:22:04,394 | INFO     | architecture information:
[2025-11-24 19:22:49] 2025-11-25 00:22:04,394 | INFO     | executing command: cat /etc/os-release
[2025-11-24 19:22:49] 2025-11-25 00:22:04,408 | INFO     | cat /etc/os-release:
[2025-11-24 19:22:49] NAME="CentOS Linux"
[2025-11-24 19:22:49] VERSION="7 (Core)"
[2025-11-24 19:22:49] ID="centos"
[2025-11-24 19:22:49] ID_LIKE="rhel fedora"
[2025-11-24 19:22:49] VERSION_ID="7"
[2025-11-24 19:22:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 19:22:49] ANSI_COLOR="0;31"
[2025-11-24 19:22:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 19:22:49] HOME_URL="https://www.centos.org/"
[2025-11-24 19:22:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 19:22:49] 
[2025-11-24 19:22:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 19:22:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 19:22:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 19:22:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 19:22:49] 
[2025-11-24 19:22:49] 2025-11-25 00:22:04,409 | INFO     | ***************************************
[2025-11-24 19:22:49] 2025-11-25 00:22:04,912 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 19:22:49] 2025-11-25 00:22:04,927 | INFO     | sufficient remaining disk space (18414043136 B)
[2025-11-24 19:22:49] 2025-11-25 00:22:04,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 19:22:49] 2025-11-25 00:22:04,928 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 19:22:49] 2025-11-25 00:22:04,928 | INFO     | update_server=False
[2025-11-24 19:22:49] 2025-11-25 00:22:04,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 19:22:49] 2025-11-25 00:22:04,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:22:49] 2025-11-25 00:22:04,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 19:22:49] 2025-11-25 00:22:05,122 | INFO     | all job control threads have been joined
[2025-11-24 19:22:49] 2025-11-25 00:22:05,318 | INFO     | all data control threads have been joined
[2025-11-24 19:22:49] 2025-11-25 00:22:05,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 19:22:49] 2025-11-25 00:22:05,365 | INFO     | aborting loop
[2025-11-24 19:22:49] 2025-11-25 00:22:05,934 | INFO     | [job] retrieve thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:05,934 | INFO     | [job] queue monitor thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,012 | INFO     | all payload control threads have been joined
[2025-11-24 19:22:49] 2025-11-25 00:22:06,121 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,127 | INFO     | [data] copytool_in thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,128 | INFO     | [job] control thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,324 | INFO     | [data] control thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,338 | INFO     | [payload] validate_post thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,371 | INFO     | [job] job monitor thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,608 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:06,935 | INFO     | [data] copytool_out thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:07,018 | INFO     | [payload] control thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:07,022 | INFO     | [job] validate thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:07,051 | INFO     | [payload] failed_post thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:07,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 19:22:49] 2025-11-25 00:22:07,413 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:11,405 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 19:22:49] 2025-11-25 00:22:35,692 | INFO     | PID=26899 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 19:22:49] 2025-11-25 00:22:35,692 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 19:22:49] 2025-11-25 00:22:35,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 19:22:49] 2025-11-25 00:22:35,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 19:22:49] 2025-11-25 00:22:43,953 | INFO     | [monitor] cgroup control has ended
[2025-11-24 19:22:49] 2025-11-25 00:22:44,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183095351104)>', '<ExcThread(monitor, started 140182221219584)>']
[2025-11-24 19:22:49] 2025-11-25 00:22:44,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 19:22:49] 2025-11-25 00:22:44,736 | INFO     | [monitor] control thread has ended
[2025-11-24 19:22:49] 2025-11-25 00:22:49,642 | INFO     | all workflow threads have been joined
[2025-11-24 19:22:49] 2025-11-25 00:22:49,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 19:22:49] 2025-11-25 00:22:49,642 | INFO     | traces error code: 0
[2025-11-24 19:22:49] 2025-11-25 00:22:49,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 19:22:49] 2025-11-25 00:22:49,733 [wrapper] ==== pilot stdout END ====
[2025-11-24 19:22:49] 2025-11-25 00:22:49,737 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 19:22:49] 2025-11-25 00:22:49,741 [wrapper] pilotpid: 26899
[2025-11-24 19:22:49] 2025-11-25 00:22:49,744 [wrapper] Pilot exit status: 0
[2025-11-24 19:22:49] 2025-11-25 00:22:49,761 [wrapper] pandaids: 6894053170
[2025-11-24 19:22:49] 2025-11-25 00:22:49,806 [wrapper] cleanup supervisor_pilot 16952 26900
[2025-11-24 19:22:49] 2025-11-25 00:22:49,810 [wrapper] Test setup, not cleaning
[2025-11-24 19:22:49] 2025-11-25 00:22:49,814 [wrapper] apfmon messages muted
[2025-11-24 19:22:49] 2025-11-25 00:22:49,818 [wrapper] ==== wrapper stdout END ====
[2025-11-24 19:22:49] 2025-11-25 00:22:49,821 [wrapper] ==== wrapper stderr END ====
[2025-11-24 19:22:49]  *** Error codes and diagnostics ***
[2025-11-24 19:22:49]     "exeErrorCode": 0,
[2025-11-24 19:22:49]     "exeErrorDiag": "",
[2025-11-24 19:22:49]     "pilotErrorCode": 0,
[2025-11-24 19:22:49]     "pilotErrorDiag": "",
[2025-11-24 19:22:49]  *** Listing of results directory ***
[2025-11-24 19:22:49] total 602964
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 18:17 queuedata.json
[2025-11-24 19:22:49] -rwx------ 1 boincer umatlas     36292 Nov 23 18:18 runpilot2-wrapper.sh
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas       100 Nov 24 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 19:22:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 17:28 run_atlas
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas       105 Nov 24 17:28 job.xml
[2025-11-24 19:22:49] -rw-r--r-- 2 boincer umatlas 308463861 Nov 24 17:28 EVNT.47523616._000005.pool.root.1
[2025-11-24 19:22:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:28 start_atlas.sh
[2025-11-24 19:22:49] drwxrwx--x 2 boincer umatlas      4096 Nov 24 17:28 shared
[2025-11-24 19:22:49] -rw-r--r-- 2 boincer umatlas    589957 Nov 24 17:28 input.tar.gz
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas         0 Nov 24 17:28 boinc_lockfile
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas      2612 Nov 24 17:28 pandaJob.out
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas        57 Nov 24 17:28 setup.sh.local
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas    991801 Nov 24 17:28 agis_schedconf.cvmfs.json
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas   1516227 Nov 24 17:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 19:22:49] drwx------ 5 boincer umatlas      4096 Nov 24 17:28 pilot3
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 19:21 init_data.xml
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas 302288457 Nov 24 19:21 HITS.47523618._000116.pool.root.1
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas       529 Nov 24 19:21 boinc_task_state.xml
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas      1049 Nov 24 19:21 memory_monitor_summary.json
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas    420574 Nov 24 19:21 log.47523618._000116.job.log.tgz.1
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas      7861 Nov 24 19:22 heartbeat.json
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas        95 Nov 24 19:22 pilot_heartbeat.json
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 19:22 boinc_mmap_file
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas        27 Nov 24 19:22 wrapper_checkpoint.txt
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas      4746 Nov 24 19:22 pilotlog.txt
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas    964382 Nov 24 19:22 log.47523618._000116.job.log.1
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas       357 Nov 24 19:22 output.list
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas       620 Nov 24 19:22 runtime_log
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas   1402880 Nov 24 19:22 result.tar.gz
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas      9344 Nov 24 19:22 runtime_log.err
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas       661 Nov 24 19:22 PMCODmfWYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKpIKDmsC2wUm.diag
[2025-11-24 19:22:49] -rw-r--r-- 1 boincer umatlas     21447 Nov 24 19:22 stderr.txt
[2025-11-24 19:22:49] HITS file was successfully produced:
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas 302288457 Nov 24 19:21 shared/HITS.pool.root.1
[2025-11-24 19:22:49]  *** Contents of shared directory: ***
[2025-11-24 19:22:49] total 598412
[2025-11-24 19:22:49] -rw-r--r-- 2 boincer umatlas 308463861 Nov 24 17:28 ATLAS.root_0
[2025-11-24 19:22:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:28 start_atlas.sh
[2025-11-24 19:22:49] -rw-r--r-- 2 boincer umatlas    589957 Nov 24 17:28 input.tar.gz
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas 302288457 Nov 24 19:21 HITS.pool.root.1
[2025-11-24 19:22:49] -rw------- 1 boincer umatlas   1402880 Nov 24 19:22 result.tar.gz
19:22:51 (23144): run_atlas exited; CPU time 75434.721743
19:22:51 (23144): called boinc_finish(0)

</stderr_txt>
]]>

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