Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:40:57 (378885): wrapper (7.7.26015): starting
22:40:57 (378885): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:40:57] Arguments: --nthreads 8
[2025-11-24 22:40:57] Threads: 8
[2025-11-24 22:40:57] Checking for CVMFS
[2025-11-24 22:40:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:40:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:40:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:40:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:40:58] 2.13.3.0 7489 28082 373084 153268 3 316 25851957 32935937 20112 16776704 0 183965297 99.648 170256098 40688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 22:40:58] CVMFS is ok
[2025-11-24 22:40:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:40:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:40:58] Further information can be found at the LHC@home message board.
[2025-11-24 22:40:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:40:58] Checking for apptainer binary...
[2025-11-24 22:40:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:40:58] Running /usr/bin/apptainer --version
[2025-11-24 22:40:58] apptainer version 1.4.4-1.el9
[2025-11-24 22:40:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:40:58] c7-13-32.aglt2.org
[2025-11-24 22:40:58] apptainer works
[2025-11-24 22:40:58] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:40:58] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:40:58] Starting ATLAS job with PandaID=6895374693
[2025-11-24 22:40:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:43:53]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:43:53] 2025-11-26 01:43:18,246 | INFO     | sum of square deviations: 681282072090.6725
[2025-11-25 20:43:53] 2025-11-26 01:43:18,275 | INFO     | sum of deviations: 2906775054067.7837
[2025-11-25 20:43:53] 2025-11-26 01:43:18,276 | INFO     | mean x: 1764081729.5576923
[2025-11-25 20:43:53] 2025-11-26 01:43:18,276 | INFO     | mean y: 2934075.8761538463
[2025-11-25 20:43:53] 2025-11-26 01:43:18,276 | INFO     | intersect: -7523740960.61679
[2025-11-25 20:43:53] 2025-11-26 01:43:18,277 | INFO     | chi2: 6.489256175546219
[2025-11-25 20:43:53] 2025-11-26 01:43:18,278 | INFO     | sum of square deviations: 673452471359.4203
[2025-11-25 20:43:53] 2025-11-26 01:43:18,308 | INFO     | sum of deviations: 3370473735326.1963
[2025-11-25 20:43:53] 2025-11-26 01:43:18,309 | INFO     | mean x: 1764081577.065637
[2025-11-25 20:43:53] 2025-11-26 01:43:18,309 | INFO     | mean y: 2943107.044787645
[2025-11-25 20:43:53] 2025-11-26 01:43:18,309 | INFO     | intersect: -8825876854.771475
[2025-11-25 20:43:53] 2025-11-26 01:43:18,310 | INFO     | chi2: 3.1143313377704316
[2025-11-25 20:43:53] 2025-11-26 01:43:18,310 | INFO     | current chi2=3.1143313377704316 (change=52.00788420857357 %)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,311 | INFO     | sum of square deviations: 665682630726.3596
[2025-11-25 20:43:53] 2025-11-26 01:43:18,362 | INFO     | sum of deviations: 3598037211189.221
[2025-11-25 20:43:53] 2025-11-26 01:43:18,363 | INFO     | mean x: 1764081424.5689921
[2025-11-25 20:43:53] 2025-11-26 01:43:18,363 | INFO     | mean y: 2947568.070542636
[2025-11-25 20:43:53] 2025-11-26 01:43:18,363 | INFO     | intersect: -9531972401.586987
[2025-11-25 20:43:53] 2025-11-26 01:43:18,364 | INFO     | chi2: 1.9494901855275542
[2025-11-25 20:43:53] 2025-11-26 01:43:18,364 | INFO     | current chi2=1.9494901855275542 (change=37.40260832608755 %)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,366 | INFO     | sum of square deviations: 657971375064.6237
[2025-11-25 20:43:53] 2025-11-26 01:43:18,406 | INFO     | sum of deviations: 3571520361209.345
[2025-11-25 20:43:53] 2025-11-26 01:43:18,406 | INFO     | mean x: 1764081272.0583658
[2025-11-25 20:43:53] 2025-11-26 01:43:18,406 | INFO     | mean y: 2947043.1821011673
[2025-11-25 20:43:53] 2025-11-26 01:43:18,406 | INFO     | intersect: -9572624814.128147
[2025-11-25 20:43:53] 2025-11-26 01:43:18,407 | INFO     | chi2: 1.9440476428276234
[2025-11-25 20:43:53] 2025-11-26 01:43:18,407 | INFO     | current chi2=1.9440476428276234 (change=0.2791777429983781 %)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,407 | INFO     | right removable region: 1284
[2025-11-25 20:43:53] 2025-11-26 01:43:18,408 | INFO     | sum of square deviations: 673450918668.5509
[2025-11-25 20:43:53] 2025-11-26 01:43:18,438 | INFO     | sum of deviations: 2604897463124.3325
[2025-11-25 20:43:53] 2025-11-26 01:43:18,439 | INFO     | mean x: 1764081882.0648649
[2025-11-25 20:43:53] 2025-11-26 01:43:18,439 | INFO     | mean y: 2939946.76988417
[2025-11-25 20:43:53] 2025-11-26 01:43:18,439 | INFO     | intersect: -6820500770.21574
[2025-11-25 20:43:53] 2025-11-26 01:43:18,440 | INFO     | chi2: 4.693269430155311
[2025-11-25 20:43:53] 2025-11-26 01:43:18,440 | INFO     | current chi2=4.693269430155311 (change=27.676311380013196 %)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,441 | INFO     | sum of square deviations: 665680236172.2203
[2025-11-25 20:43:53] 2025-11-26 01:43:18,478 | INFO     | sum of deviations: 2548511225167.9424
[2025-11-25 20:43:53] 2025-11-26 01:43:18,479 | INFO     | mean x: 1764082034.5697675
[2025-11-25 20:43:53] 2025-11-26 01:43:18,479 | INFO     | mean y: 2941052.839534884
[2025-11-25 20:43:53] 2025-11-26 01:43:18,479 | INFO     | intersect: -6750726283.101975
[2025-11-25 20:43:53] 2025-11-26 01:43:18,480 | INFO     | chi2: 4.68246081960016
[2025-11-25 20:43:53] 2025-11-26 01:43:18,480 | INFO     | current chi2=4.68246081960016 (change=0.23030023560342608 %)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,480 | INFO     | left removable region: 20
[2025-11-25 20:43:53] 2025-11-26 01:43:18,481 | INFO     | sum of square deviations: 626235597800.4016
[2025-11-25 20:43:53] 2025-11-26 01:43:18,539 | INFO     | sum of deviations: 3148384561227.141
[2025-11-25 20:43:53] 2025-11-26 01:43:18,540 | INFO     | mean x: 1764081851.5775316
[2025-11-25 20:43:53] 2025-11-26 01:43:18,540 | INFO     | mean y: 2955245.518987342
[2025-11-25 20:43:53] 2025-11-26 01:43:18,540 | INFO     | intersect: -8865924271.63983
[2025-11-25 20:43:53] 2025-11-26 01:43:18,541 | INFO     | chi2: 0.11521125019308508
[2025-11-25 20:43:53] 2025-11-26 01:43:18,541 | INFO     | current memory leak: 5.03 B/s (using 1264 data points, chi2=0.12)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | could have reported an average CPU frequency of 3290 MHz (47 samples)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | ..............................
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | . Timing measurements:
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | . get job = 0 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | . initial setup = 2 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | . payload setup = 10 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,542 | INFO     | . stage-in = 0 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,543 | INFO     | . payload execution = 79276 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,543 | INFO     | . stage-out = 4 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,543 | INFO     | . log creation = 0 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,543 | INFO     | ..............................
[2025-11-25 20:43:53] 2025-11-26 01:43:18,608 | INFO     | time since job start (79325s) is within the limit (172800.0s)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,866 | INFO     | 
[2025-11-25 20:43:53] 2025-11-26 01:43:18,866 | INFO     | job summary report
[2025-11-25 20:43:53] 2025-11-26 01:43:18,866 | INFO     | --------------------------------------------------
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | PanDA job id: 6895374693
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | task id: 47556137
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | errors: (none)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | pilot state: finished 
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | transexitcode: 0
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | exeerrorcode: 0
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | exeerrordiag: 
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | exitcode: 0
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | exitmsg: OK
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | cpuconsumptiontime: 197922 s
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | nevents: 1000
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | neventsw: 0
[2025-11-25 20:43:53] 2025-11-26 01:43:18,867 | INFO     | pid: 390589
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | pgrp: 390589
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | corecount: 8
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | event service: False
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | sizes: {0: 2284310, 6: 2284572, 11: 2284600, 79290: 2347139, 79291: 2347138, 79296: 2356193, 79299: 2356377, 79309: 2356623}
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | --------------------------------------------------
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | 
[2025-11-25 20:43:53] 2025-11-26 01:43:18,868 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:43:53] 2025-11-26 01:43:18,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:43:53] 2025-11-26 01:43:18,906 | INFO     | job 6895374693 has completed (purged errors)
[2025-11-25 20:43:53] 2025-11-26 01:43:18,906 | INFO     | overall cleanup function is called
[2025-11-25 20:43:53] 2025-11-26 01:43:19,925 | INFO     | --- collectZombieJob: --- 10, [390589]
[2025-11-25 20:43:53] 2025-11-26 01:43:19,926 | INFO     | zombie collector waiting for pid 390589
[2025-11-25 20:43:53] 2025-11-26 01:43:19,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:43:53] 2025-11-26 01:43:19,926 | INFO     | collected zombie processes
[2025-11-25 20:43:53] 2025-11-26 01:43:19,926 | INFO     | will attempt to kill all subprocesses of pid=390589
[2025-11-25 20:43:53] 2025-11-26 01:43:20,504 | INFO     | process IDs to be killed: [390589] (in reverse order)
[2025-11-25 20:43:53] 2025-11-26 01:43:20,734 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:43:53] 2025-11-26 01:43:20,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:43:53] 2025-11-26 01:43:20,753 | INFO     | did not find any defunct processes belonging to 390589
[2025-11-25 20:43:53] 2025-11-26 01:43:20,771 | INFO     | did not find any defunct processes belonging to 390589
[2025-11-25 20:43:53] 2025-11-26 01:43:20,773 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:43:53] 2025-11-26 01:43:20,773 | INFO     | ready for new job
[2025-11-25 20:43:53] 2025-11-26 01:43:20,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:43:53] 2025-11-26 01:43:20,792 | INFO     | ***************************************
[2025-11-25 20:43:53] 2025-11-26 01:43:20,792 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:43:53] 2025-11-26 01:43:20,792 | INFO     | ***************************************
[2025-11-25 20:43:53] 2025-11-26 01:43:20,792 | INFO     | 
[2025-11-25 20:43:53] 2025-11-26 01:43:20,800 | INFO     | architecture information:
[2025-11-25 20:43:53] 2025-11-26 01:43:20,804 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:43:53] 2025-11-26 01:43:20,834 | INFO     | cat /etc/os-release:
[2025-11-25 20:43:53] NAME="CentOS Linux"
[2025-11-25 20:43:53] VERSION="7 (Core)"
[2025-11-25 20:43:53] ID="centos"
[2025-11-25 20:43:53] ID_LIKE="rhel fedora"
[2025-11-25 20:43:53] VERSION_ID="7"
[2025-11-25 20:43:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:43:53] ANSI_COLOR="0;31"
[2025-11-25 20:43:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:43:53] HOME_URL="https://www.centos.org/"
[2025-11-25 20:43:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:43:53] 
[2025-11-25 20:43:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:43:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:43:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:43:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:43:53] 
[2025-11-25 20:43:53] 2025-11-26 01:43:20,834 | INFO     | ***************************************
[2025-11-25 20:43:53] 2025-11-26 01:43:21,336 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:43:53] 2025-11-26 01:43:21,356 | INFO     | sufficient remaining disk space (90025492480 B)
[2025-11-25 20:43:53] 2025-11-26 01:43:21,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:43:53] 2025-11-26 01:43:21,357 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:43:53] 2025-11-26 01:43:21,357 | INFO     | update_server=False
[2025-11-25 20:43:53] 2025-11-26 01:43:21,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:43:53] 2025-11-26 01:43:21,614 | INFO     | all payload control threads have been joined
[2025-11-25 20:43:53] 2025-11-26 01:43:21,768 | INFO     | all data control threads have been joined
[2025-11-25 20:43:53] 2025-11-26 01:43:21,829 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 20:43:53] 2025-11-26 01:43:21,830 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 20:43:53] 2025-11-26 01:43:21,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:43:53] 2025-11-26 01:43:21,830 | INFO     | will abort loop
[2025-11-25 20:43:53] 2025-11-26 01:43:22,036 | INFO     | all job control threads have been joined
[2025-11-25 20:43:53] 2025-11-26 01:43:22,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:43:53] 2025-11-26 01:43:22,363 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,576 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,620 | INFO     | [payload] control thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,690 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,774 | INFO     | [data] control thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,791 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,838 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:22,882 | INFO     | [job] validate thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:23,006 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:23,044 | INFO     | [job] control thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:23,175 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:23,431 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:23,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:43:53] 2025-11-26 01:43:24,063 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:24,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:43:53] 2025-11-26 01:43:24,701 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:28,108 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:43:53] 2025-11-26 01:43:31,639 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:43:53] 2025-11-26 01:43:33,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010945689408)>', '<ExcThread(monitor, started 140010296702720)>']
[2025-11-25 20:43:53] 2025-11-26 01:43:38,146 | INFO     | all workflow threads have been joined
[2025-11-25 20:43:53] 2025-11-26 01:43:38,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:43:53] 2025-11-26 01:43:38,147 | INFO     | traces error code: 0
[2025-11-25 20:43:53] 2025-11-26 01:43:38,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:43:53] 2025-11-26 01:43:52,440 | INFO     | PID=382730 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 20:43:53] 2025-11-26 01:43:52,441 | INFO     | .. there are 34 such processes running
[2025-11-25 20:43:53] 2025-11-26 01:43:52,441 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:43:53] 2025-11-26 01:43:52,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:43:53] 2025-11-26 01:43:52,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:43:53] 2025-11-26 01:43:52,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:43:53] 2025-11-26 01:43:52,441 | INFO     | [monitor] control thread has ended
[2025-11-25 20:43:53] 2025-11-26 01:43:52,676 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:43:53] 2025-11-26 01:43:52,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:43:53] 2025-11-26 01:43:52,711 [wrapper] pilotpid: 382730
[2025-11-25 20:43:53] 2025-11-26 01:43:52,732 [wrapper] Pilot exit status: 0
[2025-11-25 20:43:53] 2025-11-26 01:43:52,829 [wrapper] pandaids: 6895374693
[2025-11-25 20:43:53] 2025-11-26 01:43:53,159 [wrapper] cleanup supervisor_pilot  819689 382731
[2025-11-25 20:43:53] 2025-11-26 01:43:53,164 [wrapper] Test setup, not cleaning
[2025-11-25 20:43:53] 2025-11-26 01:43:53,167 [wrapper] apfmon messages muted
[2025-11-25 20:43:53] 2025-11-26 01:43:53,208 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:43:53] 2025-11-26 01:43:53,216 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:43:53]  *** Error codes and diagnostics ***
[2025-11-25 20:43:53]     "exeErrorCode": 0,
[2025-11-25 20:43:53]     "exeErrorDiag": "",
[2025-11-25 20:43:53]     "pilotErrorCode": 0,
[2025-11-25 20:43:53]     "pilotErrorDiag": "",
[2025-11-25 20:43:53]  *** Listing of results directory ***
[2025-11-25 20:43:53] total 1327700
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-25 20:43:53] -rwx------. 1 boincer umatlas     36292 Nov 23 18:26 runpilot2-wrapper.sh
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 18:26 queuedata.json
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas       100 Nov 24 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:43:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 22:40 run_atlas
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas       105 Nov 24 22:40 job.xml
[2025-11-25 20:43:53] -rw-r--r--. 2 boincer umatlas 409421361 Nov 24 22:40 EVNT.47483658._000946.pool.root.1
[2025-11-25 20:43:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:40 start_atlas.sh
[2025-11-25 20:43:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 22:40 shared
[2025-11-25 20:43:53] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 22:40 input.tar.gz
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas         0 Nov 24 22:40 boinc_lockfile
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 22:40 pandaJob.out
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas        57 Nov 24 22:40 setup.sh.local
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas    991801 Nov 24 22:41 agis_schedconf.cvmfs.json
[2025-11-25 20:43:53] drwx------. 5 boincer umatlas      4096 Nov 24 22:41 pilot3
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas       533 Nov 25 20:32 boinc_task_state.xml
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas      6902 Nov 25 20:39 init_data.xml
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas 920762187 Nov 25 20:41 HITS.47556137._009322.pool.root.1
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas      1057 Nov 25 20:42 memory_monitor_summary.json
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas        95 Nov 25 20:43 pilot_heartbeat.json
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas   1516240 Nov 25 20:43 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas   2367286 Nov 25 20:43 log.47556137._009322.job.log.tgz.1
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas      8601 Nov 25 20:43 heartbeat.json
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 20:43 boinc_mmap_file
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas        29 Nov 25 20:43 wrapper_checkpoint.txt
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas       822 Nov 25 20:43 pilotlog.txt
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas  10365156 Nov 25 20:43 log.47556137._009322.job.log.1
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas       353 Nov 25 20:43 output.list
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas       620 Nov 25 20:43 runtime_log
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas  12748800 Nov 25 20:43 result.tar.gz
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 20:43 runtime_log.err
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas       665 Nov 25 20:43 oARLDmjeYh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiHLKDmQR4E6n.diag
[2025-11-25 20:43:53] -rw-r--r--. 1 boincer umatlas     21179 Nov 25 20:43 stderr.txt
[2025-11-25 20:43:53] HITS file was successfully produced:
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas 920762187 Nov 25 20:41 shared/HITS.pool.root.1
[2025-11-25 20:43:53]  *** Contents of shared directory: ***
[2025-11-25 20:43:53] total 1312068
[2025-11-25 20:43:53] -rw-r--r--. 2 boincer umatlas 409421361 Nov 24 22:40 ATLAS.root_0
[2025-11-25 20:43:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:40 start_atlas.sh
[2025-11-25 20:43:53] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 22:40 input.tar.gz
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas 920762187 Nov 25 20:41 HITS.pool.root.1
[2025-11-25 20:43:53] -rw-------. 1 boincer umatlas  12748800 Nov 25 20:43 result.tar.gz
20:43:55 (378885): run_atlas exited; CPU time 198475.939337
20:43:55 (378885): called boinc_finish(0)

</stderr_txt>
]]>

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