Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:05:14 (25017): wrapper (7.7.26015): starting
17:05:14 (25017): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 17:05:14] Arguments: --nthreads 12
[2025-11-24 17:05:14] Threads: 12
[2025-11-24 17:05:14] Checking for CVMFS
[2025-11-24 17:05:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:05:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:05:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:05:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:05:14] 2.11.2.0 2979 285392 93676 153259 0 82 14124841 20275201 1 130560 1 127725950 99.975 15953594 13829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 17:05:14] CVMFS is ok
[2025-11-24 17:05:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:05:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:05:14] Further information can be found at the LHC@home message board.
[2025-11-24 17:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:05:14] Checking for apptainer binary...
[2025-11-24 17:05:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:05:14] Running /usr/bin/apptainer --version
[2025-11-24 17:05:14] apptainer version 1.3.2-1.el7
[2025-11-24 17:05:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:05:16] c-205-21.aglt2.org
[2025-11-24 17:05:16] apptainer works
[2025-11-24 17:05:16] Set ATHENA_PROC_NUMBER=12
[2025-11-24 17:05:16] Set ATHENA_CORE_NUMBER=12
[2025-11-24 17:05:16] Starting ATLAS job with PandaID=6895374630
[2025-11-24 17:05:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:05:19]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:05:19] 2025-11-25 05:04:37,389 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:05:19] 2025-11-25 05:04:37,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:05:19] 2025-11-25 05:04:37,396 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:05:19] 2025-11-25 05:04:37,396 | INFO     | sum of square deviations: 21685487009.852192
[2025-11-25 00:05:19] 2025-11-25 05:04:37,400 | INFO     | sum of deviations: 322969381799.3496
[2025-11-25 00:05:19] 2025-11-25 05:04:37,400 | INFO     | mean x: 1764034495.6917477
[2025-11-25 00:05:19] 2025-11-25 05:04:37,400 | INFO     | mean y: 3395300.514563107
[2025-11-25 00:05:19] 2025-11-25 05:04:37,400 | INFO     | intersect: -26268974339.487103
[2025-11-25 00:05:19] 2025-11-25 05:04:37,401 | INFO     | chi2: 5.870914047696727
[2025-11-25 00:05:19] 2025-11-25 05:04:37,401 | INFO     | sum of square deviations: 20905533689.665817
[2025-11-25 00:05:19] 2025-11-25 05:04:37,405 | INFO     | sum of deviations: 464378602556.32996
[2025-11-25 00:05:19] 2025-11-25 05:04:37,405 | INFO     | mean x: 1764034343.1941032
[2025-11-25 00:05:19] 2025-11-25 05:04:37,405 | INFO     | mean y: 3422918.9705159706
[2025-11-25 00:05:19] 2025-11-25 05:04:37,405 | INFO     | intersect: -39181408012.12379
[2025-11-25 00:05:19] 2025-11-25 05:04:37,406 | INFO     | chi2: 3.32272548752123
[2025-11-25 00:05:19] 2025-11-25 05:04:37,406 | INFO     | current chi2=3.32272548752123 (change=43.4036086965913 %)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,407 | INFO     | sum of square deviations: 20144510956.975124
[2025-11-25 00:05:19] 2025-11-25 05:04:37,410 | INFO     | sum of deviations: 544992381132.3782
[2025-11-25 00:05:19] 2025-11-25 05:04:37,410 | INFO     | mean x: 1764034190.6965175
[2025-11-25 00:05:19] 2025-11-25 05:04:37,410 | INFO     | mean y: 3439039.4129353235
[2025-11-25 00:05:19] 2025-11-25 05:04:37,411 | INFO     | intersect: -47720985546.518196
[2025-11-25 00:05:19] 2025-11-25 05:04:37,411 | INFO     | chi2: 2.3383754545299436
[2025-11-25 00:05:19] 2025-11-25 05:04:37,411 | INFO     | current chi2=2.3383754545299436 (change=29.624777511356097 %)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,412 | INFO     | sum of square deviations: 19402186249.279655
[2025-11-25 00:05:19] 2025-11-25 05:04:37,415 | INFO     | sum of deviations: 540266609252.4738
[2025-11-25 00:05:19] 2025-11-25 05:04:37,415 | INFO     | mean x: 1764034038.1989925
[2025-11-25 00:05:19] 2025-11-25 05:04:37,415 | INFO     | mean y: 3438051.1838790933
[2025-11-25 00:05:19] 2025-11-25 05:04:37,415 | INFO     | intersect: -49117247431.314384
[2025-11-25 00:05:19] 2025-11-25 05:04:37,416 | INFO     | chi2: 2.292816915944606
[2025-11-25 00:05:19] 2025-11-25 05:04:37,416 | INFO     | current chi2=2.292816915944606 (change=1.9482987001544425 %)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,416 | INFO     | right removable region: 396
[2025-11-25 00:05:19] 2025-11-25 05:04:37,416 | INFO     | sum of square deviations: 20905485499.665817
[2025-11-25 00:05:19] 2025-11-25 05:04:37,420 | INFO     | sum of deviations: 199720029351.65076
[2025-11-25 00:05:19] 2025-11-25 05:04:37,420 | INFO     | mean x: 1764034648.1941032
[2025-11-25 00:05:19] 2025-11-25 05:04:37,420 | INFO     | mean y: 3419305.687960688
[2025-11-25 00:05:19] 2025-11-25 05:04:37,420 | INFO     | intersect: -16849241290.034014
[2025-11-25 00:05:19] 2025-11-25 05:04:37,421 | INFO     | chi2: 3.747436080499239
[2025-11-25 00:05:19] 2025-11-25 05:04:37,421 | INFO     | current chi2=3.747436080499239 (change=36.16946100634142 %)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,421 | INFO     | sum of square deviations: 20144464351.751198
[2025-11-25 00:05:19] 2025-11-25 05:04:37,425 | INFO     | sum of deviations: 167454051005.59692
[2025-11-25 00:05:19] 2025-11-25 05:04:37,425 | INFO     | mean x: 1764034800.6915424
[2025-11-25 00:05:19] 2025-11-25 05:04:37,425 | INFO     | mean y: 3425769.9402985075
[2025-11-25 00:05:19] 2025-11-25 05:04:37,425 | INFO     | intersect: -14660392951.304098
[2025-11-25 00:05:19] 2025-11-25 05:04:37,426 | INFO     | chi2: 3.688345553226311
[2025-11-25 00:05:19] 2025-11-25 05:04:37,426 | INFO     | current chi2=3.688345553226311 (change=1.576825488243037 %)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,426 | INFO     | left removable region: 20
[2025-11-25 00:05:19] 2025-11-25 05:04:37,426 | INFO     | sum of square deviations: 16483260545.039913
[2025-11-25 00:05:19] 2025-11-25 05:04:37,429 | INFO     | sum of deviations: 332094819186.54535
[2025-11-25 00:05:19] 2025-11-25 05:04:37,430 | INFO     | mean x: 1764034617.6994681
[2025-11-25 00:05:19] 2025-11-25 05:04:37,430 | INFO     | mean y: 3481830.22606383
[2025-11-25 00:05:19] 2025-11-25 05:04:37,430 | INFO     | intersect: -35537226623.8423
[2025-11-25 00:05:19] 2025-11-25 05:04:37,430 | INFO     | chi2: 0.04555658997563602
[2025-11-25 00:05:19] 2025-11-25 05:04:37,430 | INFO     | current memory leak: 20.15 B/s (using 376 data points, chi2=0.05)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | could have reported an average CPU frequency of 2411 MHz (17 samples)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | ..............................
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | . Timing measurements:
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | . get job = 0 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | . initial setup = 2 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | . payload setup = 7 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,431 | INFO     | . stage-in = 0 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,432 | INFO     | . payload execution = 25106 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,432 | INFO     | . stage-out = 3 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,432 | INFO     | . log creation = 0 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,432 | INFO     | ..............................
[2025-11-25 00:05:19] 2025-11-25 05:04:37,992 | INFO     | 
[2025-11-25 00:05:19] 2025-11-25 05:04:37,992 | INFO     | job summary report
[2025-11-25 00:05:19] 2025-11-25 05:04:37,993 | INFO     | --------------------------------------------------
[2025-11-25 00:05:19] 2025-11-25 05:04:37,993 | INFO     | PanDA job id: 6895374630
[2025-11-25 00:05:19] 2025-11-25 05:04:37,993 | INFO     | task id: 47556149
[2025-11-25 00:05:19] 2025-11-25 05:04:37,993 | INFO     | errors: (none)
[2025-11-25 00:05:19] 2025-11-25 05:04:37,993 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:05:19] 2025-11-25 05:04:37,993 | INFO     | pilot state: finished 
[2025-11-25 00:05:19] 2025-11-25 05:04:37,994 | INFO     | transexitcode: 0
[2025-11-25 00:05:19] 2025-11-25 05:04:37,994 | INFO     | exeerrorcode: 0
[2025-11-25 00:05:19] 2025-11-25 05:04:37,994 | INFO     | exeerrordiag: 
[2025-11-25 00:05:19] 2025-11-25 05:04:37,994 | INFO     | exitcode: 0
[2025-11-25 00:05:19] 2025-11-25 05:04:37,994 | INFO     | exitmsg: OK
[2025-11-25 00:05:19] 2025-11-25 05:04:37,994 | INFO     | cpuconsumptiontime: 287240 s
[2025-11-25 00:05:19] 2025-11-25 05:04:37,995 | INFO     | nevents: 1000
[2025-11-25 00:05:19] 2025-11-25 05:04:37,995 | INFO     | neventsw: 0
[2025-11-25 00:05:19] 2025-11-25 05:04:37,995 | INFO     | pid: 2787
[2025-11-25 00:05:19] 2025-11-25 05:04:37,995 | INFO     | pgrp: 2787
[2025-11-25 00:05:19] 2025-11-25 05:04:37,995 | INFO     | corecount: 12
[2025-11-25 00:05:19] 2025-11-25 05:04:37,995 | INFO     | event service: False
[2025-11-25 00:05:19] 2025-11-25 05:04:37,996 | INFO     | sizes: {0: 2284310, 5: 2284572, 11: 2284628, 25117: 2321552, 25121: 2330546, 25124: 2330602, 25131: 2331040}
[2025-11-25 00:05:19] 2025-11-25 05:04:37,996 | INFO     | --------------------------------------------------
[2025-11-25 00:05:19] 2025-11-25 05:04:37,996 | INFO     | 
[2025-11-25 00:05:19] 2025-11-25 05:04:37,996 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 00:05:19] 2025-11-25 05:04:38,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,022 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,023 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:05:19] 2025-11-25 05:04:38,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:05:19] 2025-11-25 05:04:38,024 | INFO     | job 6895374630 has completed (purged errors)
[2025-11-25 00:05:19] 2025-11-25 05:04:38,025 | INFO     | overall cleanup function is called
[2025-11-25 00:05:19] 2025-11-25 05:04:39,041 | INFO     | --- collectZombieJob: --- 10, [2787]
[2025-11-25 00:05:19] 2025-11-25 05:04:39,041 | INFO     | zombie collector waiting for pid 2787
[2025-11-25 00:05:19] 2025-11-25 05:04:39,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:05:19] 2025-11-25 05:04:39,042 | INFO     | collected zombie processes
[2025-11-25 00:05:19] 2025-11-25 05:04:39,042 | INFO     | will attempt to kill all subprocesses of pid=2787
[2025-11-25 00:05:19] 2025-11-25 05:04:39,134 | INFO     | process IDs to be killed: [2787] (in reverse order)
[2025-11-25 00:05:19] 2025-11-25 05:04:39,184 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:05:19] 2025-11-25 05:04:39,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:05:19] 2025-11-25 05:04:39,188 | INFO     | did not find any defunct processes belonging to 2787
[2025-11-25 00:05:19] 2025-11-25 05:04:39,191 | INFO     | did not find any defunct processes belonging to 2787
[2025-11-25 00:05:19] 2025-11-25 05:04:39,193 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:05:19] 2025-11-25 05:04:39,193 | INFO     | ready for new job
[2025-11-25 00:05:19] 2025-11-25 05:04:39,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:05:19] 2025-11-25 05:04:39,196 | INFO     | ***************************************
[2025-11-25 00:05:19] 2025-11-25 05:04:39,196 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:05:19] 2025-11-25 05:04:39,196 | INFO     | ***************************************
[2025-11-25 00:05:19] 2025-11-25 05:04:39,196 | INFO     | 
[2025-11-25 00:05:19] 2025-11-25 05:04:39,196 | INFO     | architecture information:
[2025-11-25 00:05:19] 2025-11-25 05:04:39,197 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:05:19] 2025-11-25 05:04:39,212 | INFO     | cat /etc/os-release:
[2025-11-25 00:05:19] NAME="CentOS Linux"
[2025-11-25 00:05:19] VERSION="7 (Core)"
[2025-11-25 00:05:19] ID="centos"
[2025-11-25 00:05:19] ID_LIKE="rhel fedora"
[2025-11-25 00:05:19] VERSION_ID="7"
[2025-11-25 00:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:05:19] ANSI_COLOR="0;31"
[2025-11-25 00:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:05:19] HOME_URL="https://www.centos.org/"
[2025-11-25 00:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:05:19] 
[2025-11-25 00:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:05:19] 
[2025-11-25 00:05:19] 2025-11-25 05:04:39,212 | INFO     | ***************************************
[2025-11-25 00:05:19] 2025-11-25 05:04:39,715 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 00:05:19] 2025-11-25 05:04:39,733 | INFO     | sufficient remaining disk space (28257026048 B)
[2025-11-25 00:05:19] 2025-11-25 05:04:39,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:05:19] 2025-11-25 05:04:39,733 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:05:19] 2025-11-25 05:04:39,733 | INFO     | update_server=False
[2025-11-25 00:05:19] 2025-11-25 05:04:39,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:05:19] 2025-11-25 05:04:39,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:05:19] 2025-11-25 05:04:39,734 | INFO     | aborting loop
[2025-11-25 00:05:19] 2025-11-25 05:04:40,739 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:40,740 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:40,793 | INFO     | all data control threads have been joined
[2025-11-25 00:05:19] 2025-11-25 05:04:40,800 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:40,802 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:41,100 | INFO     | all payload control threads have been joined
[2025-11-25 00:05:19] 2025-11-25 05:04:41,118 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:41,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:05:19] 2025-11-25 05:04:41,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:05:19] 2025-11-25 05:04:41,318 | INFO     | all job control threads have been joined
[2025-11-25 00:05:19] 2025-11-25 05:04:41,523 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:41,617 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:41,746 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:41,798 | INFO     | [data] control thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:42,105 | INFO     | [payload] control thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:42,110 | INFO     | [job] validate thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:42,322 | INFO     | [job] control thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:42,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:05:19] 2025-11-25 05:04:43,211 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:43,529 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:45,246 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:04:50,471 | INFO     | job.realtimelogging is not enabled
[2025-11-25 00:05:19] 2025-11-25 05:04:51,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:05:19] 2025-11-25 05:05:09,544 | INFO     | PID=28712 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:05:19] 2025-11-25 05:05:09,544 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:05:19] 2025-11-25 05:05:09,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:05:19] 2025-11-25 05:05:09,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:05:19] 2025-11-25 05:05:12,042 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:05:19] 2025-11-25 05:05:14,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701381867328)>', '<ExcThread(monitor, started 140701064992512)>']
[2025-11-25 00:05:19] 2025-11-25 05:05:14,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:05:19] 2025-11-25 05:05:14,570 | INFO     | [monitor] control thread has ended
[2025-11-25 00:05:19] 2025-11-25 05:05:19,177 | INFO     | all workflow threads have been joined
[2025-11-25 00:05:19] 2025-11-25 05:05:19,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:05:19] 2025-11-25 05:05:19,178 | INFO     | traces error code: 0
[2025-11-25 00:05:19] 2025-11-25 05:05:19,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:05:19] 2025-11-25 05:05:19,267 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:05:19] 2025-11-25 05:05:19,271 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:05:19] 2025-11-25 05:05:19,275 [wrapper] pilotpid: 28712
[2025-11-25 00:05:19] 2025-11-25 05:05:19,278 [wrapper] Pilot exit status: 0
[2025-11-25 00:05:19] 2025-11-25 05:05:19,294 [wrapper] pandaids: 6895374630
[2025-11-25 00:05:19] 2025-11-25 05:05:19,340 [wrapper] cleanup supervisor_pilot 10677 28713
[2025-11-25 00:05:19] 2025-11-25 05:05:19,344 [wrapper] Test setup, not cleaning
[2025-11-25 00:05:19] 2025-11-25 05:05:19,362 [wrapper] apfmon messages muted
[2025-11-25 00:05:19] 2025-11-25 05:05:19,366 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:05:19] 2025-11-25 05:05:19,370 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:05:19]  *** Error codes and diagnostics ***
[2025-11-25 00:05:19]     "exeErrorCode": 0,
[2025-11-25 00:05:19]     "exeErrorDiag": "",
[2025-11-25 00:05:19]     "pilotErrorCode": 0,
[2025-11-25 00:05:19]     "pilotErrorDiag": "",
[2025-11-25 00:05:19]  *** Listing of results directory ***
[2025-11-25 00:05:19] total 1298480
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 18:11 pilot3.tar.gz
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 18:21 queuedata.json
[2025-11-25 00:05:19] -rwx------ 1 boincer umatlas     36292 Nov 23 18:22 runpilot2-wrapper.sh
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas       100 Nov 24 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:05:19] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 17:05 run_atlas
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas       105 Nov 24 17:05 job.xml
[2025-11-25 00:05:19] -rw-r--r-- 2 boincer umatlas 407938484 Nov 24 17:05 EVNT.47483658._001203.pool.root.1
[2025-11-25 00:05:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:05 start_atlas.sh
[2025-11-25 00:05:19] drwxrwx--x 2 boincer umatlas      4096 Nov 24 17:05 shared
[2025-11-25 00:05:19] -rw-r--r-- 2 boincer umatlas    590108 Nov 24 17:05 input.tar.gz
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas         0 Nov 24 17:05 boinc_lockfile
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 17:05 pandaJob.out
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas        57 Nov 24 17:05 setup.sh.local
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas    991801 Nov 24 17:05 agis_schedconf.cvmfs.json
[2025-11-25 00:05:19] drwx------ 5 boincer umatlas      4096 Nov 24 17:05 pilot3
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas       532 Nov 24 23:53 boinc_task_state.xml
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas 906373413 Nov 25 00:03 HITS.47556149._001896.pool.root.1
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas      5956 Nov 25 00:04 init_data.xml
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas      1062 Nov 25 00:04 memory_monitor_summary.json
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas   1516227 Nov 25 00:04 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas   2174537 Nov 25 00:04 log.47556149._001896.job.log.tgz.1
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas        95 Nov 25 00:04 pilot_heartbeat.json
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas      8662 Nov 25 00:04 heartbeat.json
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 00:05 boinc_mmap_file
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas        29 Nov 25 00:05 wrapper_checkpoint.txt
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas      4818 Nov 25 00:05 pilotlog.txt
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas   3533058 Nov 25 00:05 log.47556149._001896.job.log.1
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas       353 Nov 25 00:05 output.list
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas       620 Nov 25 00:05 runtime_log
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas   5724160 Nov 25 00:05 result.tar.gz
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 00:05 runtime_log.err
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas       670 Nov 25 00:05 I9CODm4aYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWpIKDmZZGqYm.diag
[2025-11-25 00:05:19] -rw-r--r-- 1 boincer umatlas     21083 Nov 25 00:05 stderr.txt
[2025-11-25 00:05:19] HITS file was successfully produced:
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas 906373413 Nov 25 00:03 shared/HITS.pool.root.1
[2025-11-25 00:05:19]  *** Contents of shared directory: ***
[2025-11-25 00:05:19] total 1289704
[2025-11-25 00:05:19] -rw-r--r-- 2 boincer umatlas 407938484 Nov 24 17:05 ATLAS.root_0
[2025-11-25 00:05:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:05 start_atlas.sh
[2025-11-25 00:05:19] -rw-r--r-- 2 boincer umatlas    590108 Nov 24 17:05 input.tar.gz
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas 906373413 Nov 25 00:03 HITS.pool.root.1
[2025-11-25 00:05:19] -rw------- 1 boincer umatlas   5724160 Nov 25 00:05 result.tar.gz
00:05:20 (25017): run_atlas exited; CPU time 280989.801240
00:05:20 (25017): called boinc_finish(0)

</stderr_txt>
]]>

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