Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:35:59 (26405): wrapper (7.7.26015): starting
17:35:59 (26405): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 17:35:59] Arguments: --nthreads 12
[2025-11-24 17:35:59] Threads: 12
[2025-11-24 17:35:59] Checking for CVMFS
[2025-11-24 17:35:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:35:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:35:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:35:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:35:59] 2.11.2.0 25590 186090 91288 153261 2 81 15160519 20275200 1 130560 2 98094207 99.967 7395117 25582 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 17:35:59] CVMFS is ok
[2025-11-24 17:35:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:35:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:35:59] Further information can be found at the LHC@home message board.
[2025-11-24 17:35:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:35:59] Checking for apptainer binary...
[2025-11-24 17:35:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:35:59] Running /usr/bin/apptainer --version
[2025-11-24 17:35:59] apptainer version 1.3.2-1.el7
[2025-11-24 17:35:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:36:01] c-205-24.aglt2.org
[2025-11-24 17:36:01] apptainer works
[2025-11-24 17:36:01] Set ATHENA_PROC_NUMBER=12
[2025-11-24 17:36:01] Set ATHENA_CORE_NUMBER=12
[2025-11-24 17:36:01] Starting ATLAS job with PandaID=6895374258
[2025-11-24 17:36:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:48:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:48:27] 2025-11-25 05:47:53,601 | INFO     | monitor loop #1942: job 0:6895374258 is in state 'finished'
[2025-11-25 00:48:27] 2025-11-25 05:47:53,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:48:27] 2025-11-25 05:47:54,021 | INFO     | time since job start (25898s) is within the limit (172800.0s)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,714 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 00:48:27] 2025-11-25 05:47:55,718 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-25 00:48:27] 2025-11-25 05:47:55,720 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895374258/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,721 | INFO     | extracted standard info from prmon json
[2025-11-25 00:48:27] 2025-11-25 05:47:55,721 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:48:27] 2025-11-25 05:47:55,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:48:27] 2025-11-25 05:47:55,727 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:48:27] 2025-11-25 05:47:55,728 | INFO     | sum of square deviations: 23635880406.490444
[2025-11-25 00:48:27] 2025-11-25 05:47:55,731 | INFO     | sum of deviations: 372738643868.95337
[2025-11-25 00:48:27] 2025-11-25 05:47:55,732 | INFO     | mean x: 1764036707.7452831
[2025-11-25 00:48:27] 2025-11-25 05:47:55,732 | INFO     | mean y: 3426687.3514150945
[2025-11-25 00:48:27] 2025-11-25 05:47:55,732 | INFO     | intersect: -27815492636.655357
[2025-11-25 00:48:27] 2025-11-25 05:47:55,732 | INFO     | chi2: 5.238044855944935
[2025-11-25 00:48:27] 2025-11-25 05:47:55,733 | INFO     | sum of square deviations: 22809552446.18593
[2025-11-25 00:48:27] 2025-11-25 05:47:55,737 | INFO     | sum of deviations: 520820877870.53174
[2025-11-25 00:48:27] 2025-11-25 05:47:55,737 | INFO     | mean x: 1764036555.24821
[2025-11-25 00:48:27] 2025-11-25 05:47:55,737 | INFO     | mean y: 3453983.042959427
[2025-11-25 00:48:27] 2025-11-25 05:47:55,737 | INFO     | intersect: -40275594431.7675
[2025-11-25 00:48:27] 2025-11-25 05:47:55,737 | INFO     | chi2: 2.660452650851274
[2025-11-25 00:48:27] 2025-11-25 05:47:55,738 | INFO     | current chi2=2.660452650851274 (change=49.209051773739866 %)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,738 | INFO     | sum of square deviations: 22002687907.87432
[2025-11-25 00:48:27] 2025-11-25 05:47:55,742 | INFO     | sum of deviations: 554307372619.406
[2025-11-25 00:48:27] 2025-11-25 05:47:55,742 | INFO     | mean x: 1764036402.7487922
[2025-11-25 00:48:27] 2025-11-25 05:47:55,742 | INFO     | mean y: 3460274.311594203
[2025-11-25 00:48:27] 2025-11-25 05:47:55,742 | INFO     | intersect: -44437400210.86257
[2025-11-25 00:48:27] 2025-11-25 05:47:55,743 | INFO     | chi2: 2.3517417503495577
[2025-11-25 00:48:27] 2025-11-25 05:47:55,743 | INFO     | current chi2=2.3517417503495577 (change=11.603698355726687 %)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,743 | INFO     | right removable region: 413
[2025-11-25 00:48:27] 2025-11-25 05:47:55,743 | INFO     | sum of square deviations: 22809489006.185932
[2025-11-25 00:48:27] 2025-11-25 05:47:55,747 | INFO     | sum of deviations: 241531129225.5511
[2025-11-25 00:48:27] 2025-11-25 05:47:55,747 | INFO     | mean x: 1764036860.24821
[2025-11-25 00:48:27] 2025-11-25 05:47:55,747 | INFO     | mean y: 3450813.735083532
[2025-11-25 00:48:27] 2025-11-25 05:47:55,747 | INFO     | intersect: -18676047650.070732
[2025-11-25 00:48:27] 2025-11-25 05:47:55,748 | INFO     | chi2: 3.030099073115189
[2025-11-25 00:48:27] 2025-11-25 05:47:55,748 | INFO     | current chi2=3.030099073115189 (change=42.152097653837984 %)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,749 | INFO     | sum of square deviations: 22002637338.36951
[2025-11-25 00:48:27] 2025-11-25 05:47:55,752 | INFO     | sum of deviations: 208586623305.7246
[2025-11-25 00:48:27] 2025-11-25 05:47:55,752 | INFO     | mean x: 1764037012.7463768
[2025-11-25 00:48:27] 2025-11-25 05:47:55,753 | INFO     | mean y: 3457033.816425121
[2025-11-25 00:48:27] 2025-11-25 05:47:55,753 | INFO     | intersect: -16719743835.991268
[2025-11-25 00:48:27] 2025-11-25 05:47:55,753 | INFO     | chi2: 2.9734658730068584
[2025-11-25 00:48:27] 2025-11-25 05:47:55,753 | INFO     | current chi2=2.9734658730068584 (change=1.8690213996899765 %)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,753 | INFO     | left removable region: 20
[2025-11-25 00:48:27] 2025-11-25 05:47:55,754 | INFO     | sum of square deviations: 18821354264.55465
[2025-11-25 00:48:27] 2025-11-25 05:47:55,757 | INFO     | sum of deviations: 349334791857.7026
[2025-11-25 00:48:27] 2025-11-25 05:47:55,757 | INFO     | mean x: 1764036982.254453
[2025-11-25 00:48:27] 2025-11-25 05:47:55,757 | INFO     | mean y: 3499676.3129770993
[2025-11-25 00:48:27] 2025-11-25 05:47:55,758 | INFO     | intersect: -32738006772.332073
[2025-11-25 00:48:27] 2025-11-25 05:47:55,758 | INFO     | chi2: 0.046785750967620394
[2025-11-25 00:48:27] 2025-11-25 05:47:55,758 | INFO     | current memory leak: 18.56 B/s (using 393 data points, chi2=0.05)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,758 | INFO     | could have reported an average CPU frequency of 2401 MHz (18 samples)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | ..............................
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . Timing measurements:
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . get job = 0 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . initial setup = 2 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . payload setup = 7 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . stage-in = 0 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . payload execution = 25861 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . stage-out = 3 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,759 | INFO     | . log creation = 0 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,760 | INFO     | ..............................
[2025-11-25 00:48:27] 2025-11-25 05:47:55,839 | INFO     | 
[2025-11-25 00:48:27] 2025-11-25 05:47:55,839 | INFO     | job summary report
[2025-11-25 00:48:27] 2025-11-25 05:47:55,840 | INFO     | --------------------------------------------------
[2025-11-25 00:48:27] 2025-11-25 05:47:55,840 | INFO     | PanDA job id: 6895374258
[2025-11-25 00:48:27] 2025-11-25 05:47:55,840 | INFO     | task id: 47556137
[2025-11-25 00:48:27] 2025-11-25 05:47:55,840 | INFO     | errors: (none)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:48:27] 2025-11-25 05:47:55,840 | INFO     | pilot state: finished 
[2025-11-25 00:48:27] 2025-11-25 05:47:55,841 | INFO     | transexitcode: 0
[2025-11-25 00:48:27] 2025-11-25 05:47:55,841 | INFO     | exeerrorcode: 0
[2025-11-25 00:48:27] 2025-11-25 05:47:55,841 | INFO     | exeerrordiag: 
[2025-11-25 00:48:27] 2025-11-25 05:47:55,841 | INFO     | exitcode: 0
[2025-11-25 00:48:27] 2025-11-25 05:47:55,841 | INFO     | exitmsg: OK
[2025-11-25 00:48:27] 2025-11-25 05:47:55,841 | INFO     | cpuconsumptiontime: 296996 s
[2025-11-25 00:48:27] 2025-11-25 05:47:55,842 | INFO     | nevents: 1000
[2025-11-25 00:48:27] 2025-11-25 05:47:55,842 | INFO     | neventsw: 0
[2025-11-25 00:48:27] 2025-11-25 05:47:55,842 | INFO     | pid: 4359
[2025-11-25 00:48:27] 2025-11-25 05:47:55,842 | INFO     | pgrp: 4359
[2025-11-25 00:48:27] 2025-11-25 05:47:55,842 | INFO     | corecount: 12
[2025-11-25 00:48:27] 2025-11-25 05:47:55,842 | INFO     | event service: False
[2025-11-25 00:48:27] 2025-11-25 05:47:55,843 | INFO     | sizes: {0: 2284310, 5: 2284572, 11: 2284628, 25870: 2321892, 25873: 2330886, 25876: 2330942, 25883: 2331316}
[2025-11-25 00:48:27] 2025-11-25 05:47:55,843 | INFO     | --------------------------------------------------
[2025-11-25 00:48:27] 2025-11-25 05:47:55,843 | INFO     | 
[2025-11-25 00:48:27] 2025-11-25 05:47:55,843 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 00:48:27] 2025-11-25 05:47:55,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,872 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:48:27] 2025-11-25 05:47:55,873 | INFO     | job 6895374258 has completed (purged errors)
[2025-11-25 00:48:27] 2025-11-25 05:47:55,873 | INFO     | overall cleanup function is called
[2025-11-25 00:48:27] 2025-11-25 05:47:56,890 | INFO     | --- collectZombieJob: --- 10, [4359]
[2025-11-25 00:48:27] 2025-11-25 05:47:56,890 | INFO     | zombie collector waiting for pid 4359
[2025-11-25 00:48:27] 2025-11-25 05:47:56,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:48:27] 2025-11-25 05:47:56,890 | INFO     | collected zombie processes
[2025-11-25 00:48:27] 2025-11-25 05:47:56,890 | INFO     | will attempt to kill all subprocesses of pid=4359
[2025-11-25 00:48:27] 2025-11-25 05:47:56,983 | INFO     | process IDs to be killed: [4359] (in reverse order)
[2025-11-25 00:48:27] 2025-11-25 05:47:57,037 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:48:27] 2025-11-25 05:47:57,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:48:27] 2025-11-25 05:47:57,040 | INFO     | did not find any defunct processes belonging to 4359
[2025-11-25 00:48:27] 2025-11-25 05:47:57,042 | INFO     | did not find any defunct processes belonging to 4359
[2025-11-25 00:48:27] 2025-11-25 05:47:57,044 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:48:27] 2025-11-25 05:47:57,044 | INFO     | ready for new job
[2025-11-25 00:48:27] 2025-11-25 05:47:57,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:48:27] 2025-11-25 05:47:57,046 | INFO     | ***************************************
[2025-11-25 00:48:27] 2025-11-25 05:47:57,046 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:48:27] 2025-11-25 05:47:57,047 | INFO     | ***************************************
[2025-11-25 00:48:27] 2025-11-25 05:47:57,047 | INFO     | 
[2025-11-25 00:48:27] 2025-11-25 05:47:57,047 | INFO     | architecture information:
[2025-11-25 00:48:27] 2025-11-25 05:47:57,048 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:48:27] 2025-11-25 05:47:57,063 | INFO     | cat /etc/os-release:
[2025-11-25 00:48:27] NAME="CentOS Linux"
[2025-11-25 00:48:27] VERSION="7 (Core)"
[2025-11-25 00:48:27] ID="centos"
[2025-11-25 00:48:27] ID_LIKE="rhel fedora"
[2025-11-25 00:48:27] VERSION_ID="7"
[2025-11-25 00:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:48:27] ANSI_COLOR="0;31"
[2025-11-25 00:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:48:27] HOME_URL="https://www.centos.org/"
[2025-11-25 00:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:48:27] 
[2025-11-25 00:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:48:27] 
[2025-11-25 00:48:27] 2025-11-25 05:47:57,063 | INFO     | ***************************************
[2025-11-25 00:48:27] 2025-11-25 05:47:57,566 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 00:48:27] 2025-11-25 05:47:57,583 | INFO     | sufficient remaining disk space (28242345984 B)
[2025-11-25 00:48:27] 2025-11-25 05:47:57,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:48:27] 2025-11-25 05:47:57,584 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:48:27] 2025-11-25 05:47:57,584 | INFO     | update_server=False
[2025-11-25 00:48:27] 2025-11-25 05:47:57,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:48:27] 2025-11-25 05:47:57,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:48:27] 2025-11-25 05:47:57,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:48:27] 2025-11-25 05:47:57,585 | INFO     | aborting loop
[2025-11-25 00:48:27] 2025-11-25 05:47:58,372 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:48:27] 2025-11-25 05:47:58,417 | INFO     | all data control threads have been joined
[2025-11-25 00:48:27] 2025-11-25 05:47:58,528 | INFO     | all job control threads have been joined
[2025-11-25 00:48:27] 2025-11-25 05:47:58,589 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:58,590 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:58,591 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:58,795 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:58,930 | INFO     | all payload control threads have been joined
[2025-11-25 00:48:27] 2025-11-25 05:47:58,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:48:27] 2025-11-25 05:47:58,975 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,218 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,423 | INFO     | [data] control thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,474 | INFO     | [job] validate thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,534 | INFO     | [job] control thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:48:27] 2025-11-25 05:47:59,582 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,935 | INFO     | [payload] control thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:47:59,974 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:48:00,066 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:48:00,950 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:48:03,549 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:48:07,732 | INFO     | job.realtimelogging is not enabled
[2025-11-25 00:48:27] 2025-11-25 05:48:08,738 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:48:27] 2025-11-25 05:48:09,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756484540224)>', '<ExcThread(monitor, started 139755744388864)>']
[2025-11-25 00:48:27] 2025-11-25 05:48:14,374 | INFO     | all workflow threads have been joined
[2025-11-25 00:48:27] 2025-11-25 05:48:14,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:48:27] 2025-11-25 05:48:14,377 | INFO     | traces error code: 0
[2025-11-25 00:48:27] 2025-11-25 05:48:14,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:48:27] 2025-11-25 05:48:27,223 | INFO     | PID=30249 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:48:27] 2025-11-25 05:48:27,224 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:48:27] 2025-11-25 05:48:27,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:48:27] 2025-11-25 05:48:27,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:48:27] 2025-11-25 05:48:27,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:48:27] 2025-11-25 05:48:27,224 | INFO     | [monitor] control thread has ended
[2025-11-25 00:48:27] 2025-11-25 05:48:27,311 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:48:27] 2025-11-25 05:48:27,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:48:27] 2025-11-25 05:48:27,319 [wrapper] pilotpid: 30249
[2025-11-25 00:48:27] 2025-11-25 05:48:27,323 [wrapper] Pilot exit status: 0
[2025-11-25 00:48:27] 2025-11-25 05:48:27,337 [wrapper] pandaids: 6895374258
[2025-11-25 00:48:27] 2025-11-25 05:48:27,379 [wrapper] cleanup supervisor_pilot 12559 30250
[2025-11-25 00:48:27] 2025-11-25 05:48:27,383 [wrapper] Test setup, not cleaning
[2025-11-25 00:48:27] 2025-11-25 05:48:27,386 [wrapper] apfmon messages muted
[2025-11-25 00:48:27] 2025-11-25 05:48:27,390 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:48:27] 2025-11-25 05:48:27,394 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:48:27]  *** Error codes and diagnostics ***
[2025-11-25 00:48:27]     "exeErrorCode": 0,
[2025-11-25 00:48:27]     "exeErrorDiag": "",
[2025-11-25 00:48:27]     "pilotErrorCode": 0,
[2025-11-25 00:48:27]     "pilotErrorDiag": "",
[2025-11-25 00:48:27]  *** Listing of results directory ***
[2025-11-25 00:48:27] total 1315492
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-25 00:48:27] -rwx------ 1 boincer umatlas     36292 Nov 23 18:03 runpilot2-wrapper.sh
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 18:03 queuedata.json
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas       100 Nov 24 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:48:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 17:35 run_atlas
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas       105 Nov 24 17:35 job.xml
[2025-11-25 00:48:27] -rw-r--r-- 2 boincer umatlas 409716993 Nov 24 17:35 EVNT.47483658._000935.pool.root.1
[2025-11-25 00:48:27] drwxrwx--x 2 boincer umatlas      4096 Nov 24 17:35 shared
[2025-11-25 00:48:27] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 17:35 input.tar.gz
[2025-11-25 00:48:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:35 start_atlas.sh
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas         0 Nov 24 17:35 boinc_lockfile
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 17:36 pandaJob.out
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas        57 Nov 24 17:36 setup.sh.local
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas    991801 Nov 24 17:36 agis_schedconf.cvmfs.json
[2025-11-25 00:48:27] drwx------ 5 boincer umatlas      4096 Nov 24 17:36 pilot3
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas       532 Nov 25 00:38 boinc_task_state.xml
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 00:45 init_data.xml
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas 921860432 Nov 25 00:47 HITS.47556137._009216.pool.root.1
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas      1064 Nov 25 00:47 memory_monitor_summary.json
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas   1516227 Nov 25 00:47 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas   2163870 Nov 25 00:47 log.47556137._009216.job.log.tgz.1
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas      8665 Nov 25 00:47 heartbeat.json
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 00:47 boinc_mmap_file
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas        29 Nov 25 00:47 wrapper_checkpoint.txt
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas        95 Nov 25 00:48 pilot_heartbeat.json
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas       745 Nov 25 00:48 pilotlog.txt
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas   3620051 Nov 25 00:48 log.47556137._009216.job.log.1
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas       353 Nov 25 00:48 output.list
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas       620 Nov 25 00:48 runtime_log
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas   5806080 Nov 25 00:48 result.tar.gz
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 00:48 runtime_log.err
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas       670 Nov 25 00:48 K2eNDmUIYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnoIKDm2n7yon.diag
[2025-11-25 00:48:27] -rw-r--r-- 1 boincer umatlas     21285 Nov 25 00:48 stderr.txt
[2025-11-25 00:48:27] HITS file was successfully produced:
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas 921860432 Nov 25 00:47 shared/HITS.pool.root.1
[2025-11-25 00:48:27]  *** Contents of shared directory: ***
[2025-11-25 00:48:27] total 1306644
[2025-11-25 00:48:27] -rw-r--r-- 2 boincer umatlas 409716993 Nov 24 17:35 ATLAS.root_0
[2025-11-25 00:48:27] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 17:35 input.tar.gz
[2025-11-25 00:48:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 17:35 start_atlas.sh
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas 921860432 Nov 25 00:47 HITS.pool.root.1
[2025-11-25 00:48:27] -rw------- 1 boincer umatlas   5806080 Nov 25 00:48 result.tar.gz
00:48:29 (26405): run_atlas exited; CPU time 290262.212678
00:48:29 (26405): called boinc_finish(0)

</stderr_txt>
]]>

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