Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:24 (3138556): wrapper (7.7.26015): starting
19:02:24 (3138556): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 19:02:24] Arguments: --nthreads 8
[2025-11-24 19:02:24] Threads: 8
[2025-11-24 19:02:24] Checking for CVMFS
[2025-11-24 19:02:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 19:02:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 19:02:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 19:02:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 19:02:26] 2.13.3.0 10954 27862 397460 153263 1 521 29430350 32935937 25741 16776704 26 123345852 99.461 183318564 39959 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 19:02:26] CVMFS is ok
[2025-11-24 19:02:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 19:02:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 19:02:26] Further information can be found at the LHC@home message board.
[2025-11-24 19:02:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 19:02:26] Checking for apptainer binary...
[2025-11-24 19:02:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 19:02:26] Running /usr/bin/apptainer --version
[2025-11-24 19:02:26] apptainer version 1.4.4-1.el9
[2025-11-24 19:02:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 19:02:26] c7-11-13.aglt2.org
[2025-11-24 19:02:26] apptainer works
[2025-11-24 19:02:26] Set ATHENA_PROC_NUMBER=8
[2025-11-24 19:02:26] Set ATHENA_CORE_NUMBER=8
[2025-11-24 19:02:27] Starting ATLAS job with PandaID=6895559671
[2025-11-24 19:02:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:37:39]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:37:39] 2025-11-25 16:36:47,165 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 11:37:39] 2025-11-25 16:36:47,175 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.1071875000007
[2025-11-25 11:37:39] 2025-11-25 16:36:47,203 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895559671/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,204 | INFO     | extracted standard info from prmon json
[2025-11-25 11:37:39] 2025-11-25 16:36:47,204 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:37:39] 2025-11-25 16:36:47,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:37:39] 2025-11-25 16:36:47,279 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:37:39] 2025-11-25 16:36:47,280 | INFO     | sum of square deviations: 289176054568.6977
[2025-11-25 11:37:39] 2025-11-25 16:36:47,403 | INFO     | sum of deviations: 1858748755507.9553
[2025-11-25 11:37:39] 2025-11-25 16:36:47,403 | INFO     | mean x: 1764058776.1166837
[2025-11-25 11:37:39] 2025-11-25 16:36:47,403 | INFO     | mean y: 2928734.7635619245
[2025-11-25 11:37:39] 2025-11-25 16:36:47,403 | INFO     | intersect: -11335984024.248493
[2025-11-25 11:37:39] 2025-11-25 16:36:47,404 | INFO     | chi2: 6.270395841562092
[2025-11-25 11:37:39] 2025-11-25 16:36:47,405 | INFO     | sum of square deviations: 284759318452.4305
[2025-11-25 11:37:39] 2025-11-25 16:36:47,484 | INFO     | sum of deviations: 2214763460526.8003
[2025-11-25 11:37:39] 2025-11-25 16:36:47,485 | INFO     | mean x: 1764058623.622428
[2025-11-25 11:37:39] 2025-11-25 16:36:47,485 | INFO     | mean y: 2941027.568930041
[2025-11-25 11:37:39] 2025-11-25 16:36:47,485 | INFO     | intersect: -13717321413.91749
[2025-11-25 11:37:39] 2025-11-25 16:36:47,490 | INFO     | chi2: 2.7480575321329392
[2025-11-25 11:37:39] 2025-11-25 16:36:47,490 | INFO     | current chi2=2.7480575321329392 (change=56.17409807020511 %)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,491 | INFO     | sum of square deviations: 280387614733.859
[2025-11-25 11:37:39] 2025-11-25 16:36:47,545 | INFO     | sum of deviations: 2286020037418.423
[2025-11-25 11:37:39] 2025-11-25 16:36:47,545 | INFO     | mean x: 1764058471.1251292
[2025-11-25 11:37:39] 2025-11-25 16:36:47,545 | INFO     | mean y: 2943508.6411582213
[2025-11-25 11:37:39] 2025-11-25 16:36:47,545 | INFO     | intersect: -14379549869.311802
[2025-11-25 11:37:39] 2025-11-25 16:36:47,558 | INFO     | chi2: 2.4499221567819505
[2025-11-25 11:37:39] 2025-11-25 16:36:47,559 | INFO     | current chi2=2.4499221567819505 (change=10.848949553089861 %)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,559 | INFO     | right removable region: 966
[2025-11-25 11:37:39] 2025-11-25 16:36:47,559 | INFO     | sum of square deviations: 284758771772.9171
[2025-11-25 11:37:39] 2025-11-25 16:36:47,637 | INFO     | sum of deviations: 1603980355707.9993
[2025-11-25 11:37:39] 2025-11-25 16:36:47,637 | INFO     | mean x: 1764058928.6203704
[2025-11-25 11:37:39] 2025-11-25 16:36:47,647 | INFO     | mean y: 2937516.4444444445
[2025-11-25 11:37:39] 2025-11-25 16:36:47,647 | INFO     | intersect: -9933598767.23777
[2025-11-25 11:37:39] 2025-11-25 16:36:47,648 | INFO     | chi2: 4.1198315540748025
[2025-11-25 11:37:39] 2025-11-25 16:36:47,648 | INFO     | current chi2=4.1198315540748025 (change=34.29710566648272 %)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,649 | INFO     | sum of square deviations: 280386877372.8439
[2025-11-25 11:37:39] 2025-11-25 16:36:47,744 | INFO     | sum of deviations: 1534272876598.4565
[2025-11-25 11:37:39] 2025-11-25 16:36:47,754 | INFO     | mean x: 1764059081.1209927
[2025-11-25 11:37:39] 2025-11-25 16:36:47,754 | INFO     | mean y: 2939947.149948294
[2025-11-25 11:37:39] 2025-11-25 16:36:47,754 | INFO     | intersect: -9649965446.429184
[2025-11-25 11:37:39] 2025-11-25 16:36:47,755 | INFO     | chi2: 4.0648610553881985
[2025-11-25 11:37:39] 2025-11-25 16:36:47,755 | INFO     | current chi2=4.0648610553881985 (change=1.33428995737057 %)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,755 | INFO     | left removable region: 20
[2025-11-25 11:37:39] 2025-11-25 16:36:47,756 | INFO     | sum of square deviations: 262513876598.50677
[2025-11-25 11:37:39] 2025-11-25 16:36:47,809 | INFO     | sum of deviations: 1846684963919.4565
[2025-11-25 11:37:39] 2025-11-25 16:36:47,809 | INFO     | mean x: 1764059050.630021
[2025-11-25 11:37:39] 2025-11-25 16:36:47,809 | INFO     | mean y: 2958725.061310782
[2025-11-25 11:37:39] 2025-11-25 16:36:47,810 | INFO     | intersect: -12406523647.73841
[2025-11-25 11:37:39] 2025-11-25 16:36:47,810 | INFO     | chi2: 0.18117764954911506
[2025-11-25 11:37:39] 2025-11-25 16:36:47,810 | INFO     | current memory leak: 7.03 B/s (using 946 data points, chi2=0.18)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,811 | INFO     | could have reported an average CPU frequency of 3282 MHz (36 samples)
[2025-11-25 11:37:39] 2025-11-25 16:36:47,811 | INFO     | ..............................
[2025-11-25 11:37:39] 2025-11-25 16:36:47,811 | INFO     | . Timing measurements:
[2025-11-25 11:37:39] 2025-11-25 16:36:47,811 | INFO     | . get job = 0 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | . initial setup = 2 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | . payload setup = 11 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | . stage-in = 0 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | . payload execution = 59587 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | . stage-out = 4 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | . log creation = 0 s
[2025-11-25 11:37:39] 2025-11-25 16:36:47,812 | INFO     | ..............................
[2025-11-25 11:37:39] 2025-11-25 16:36:48,087 | INFO     | 
[2025-11-25 11:37:39] 2025-11-25 16:36:48,087 | INFO     | job summary report
[2025-11-25 11:37:39] 2025-11-25 16:36:48,087 | INFO     | --------------------------------------------------
[2025-11-25 11:37:39] 2025-11-25 16:36:48,087 | INFO     | PanDA job id: 6895559671
[2025-11-25 11:37:39] 2025-11-25 16:36:48,087 | INFO     | task id: 47556149
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | errors: (none)
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | pilot state: finished 
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | transexitcode: 0
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | exeerrorcode: 0
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | exeerrordiag: 
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | exitcode: 0
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | exitmsg: OK
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | cpuconsumptiontime: 196152 s
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | nevents: 1000
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | neventsw: 0
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | pid: 3149472
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | pgrp: 3149472
[2025-11-25 11:37:39] 2025-11-25 16:36:48,088 | INFO     | corecount: 8
[2025-11-25 11:37:39] 2025-11-25 16:36:48,089 | INFO     | event service: False
[2025-11-25 11:37:39] 2025-11-25 16:36:48,089 | INFO     | sizes: {0: 2284310, 9: 2284572, 11: 2284600, 59602: 2337452, 59603: 2337451, 59609: 2346506, 59612: 2346690, 59623: 2346936}
[2025-11-25 11:37:39] 2025-11-25 16:36:48,089 | INFO     | --------------------------------------------------
[2025-11-25 11:37:39] 2025-11-25 16:36:48,089 | INFO     | 
[2025-11-25 11:37:39] 2025-11-25 16:36:48,089 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 11:37:39] 2025-11-25 16:36:48,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:37:39] 2025-11-25 16:36:48,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:37:39] 2025-11-25 16:36:48,164 | INFO     | job 6895559671 has completed (purged errors)
[2025-11-25 11:37:39] 2025-11-25 16:36:48,164 | INFO     | overall cleanup function is called
[2025-11-25 11:37:39] 2025-11-25 16:36:48,272 | INFO     | PID=3142631 has CPU usage=14.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 11:37:39] 2025-11-25 16:36:48,272 | INFO     | .. there are 33 such processes running
[2025-11-25 11:37:39] 2025-11-25 16:36:49,218 | INFO     | --- collectZombieJob: --- 10, [3149472]
[2025-11-25 11:37:39] 2025-11-25 16:36:49,218 | INFO     | zombie collector waiting for pid 3149472
[2025-11-25 11:37:39] 2025-11-25 16:36:49,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:37:39] 2025-11-25 16:36:49,218 | INFO     | collected zombie processes
[2025-11-25 11:37:39] 2025-11-25 16:36:49,218 | INFO     | will attempt to kill all subprocesses of pid=3149472
[2025-11-25 11:37:39] 2025-11-25 16:36:50,150 | INFO     | process IDs to be killed: [3149472] (in reverse order)
[2025-11-25 11:37:39] 2025-11-25 16:36:50,274 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:37:39] 2025-11-25 16:36:50,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:37:39] 2025-11-25 16:36:50,288 | INFO     | did not find any defunct processes belonging to 3149472
[2025-11-25 11:37:39] 2025-11-25 16:36:50,303 | INFO     | did not find any defunct processes belonging to 3149472
[2025-11-25 11:37:39] 2025-11-25 16:36:50,304 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:37:39] 2025-11-25 16:36:50,304 | INFO     | ready for new job
[2025-11-25 11:37:39] 2025-11-25 16:36:50,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:37:39] 2025-11-25 16:36:50,309 | INFO     | ***************************************
[2025-11-25 11:37:39] 2025-11-25 16:36:50,309 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:37:39] 2025-11-25 16:36:50,309 | INFO     | ***************************************
[2025-11-25 11:37:39] 2025-11-25 16:36:50,309 | INFO     | 
[2025-11-25 11:37:39] 2025-11-25 16:36:50,312 | INFO     | architecture information:
[2025-11-25 11:37:39] 2025-11-25 16:36:50,313 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:37:39] 2025-11-25 16:36:50,333 | INFO     | cat /etc/os-release:
[2025-11-25 11:37:39] NAME="CentOS Linux"
[2025-11-25 11:37:39] VERSION="7 (Core)"
[2025-11-25 11:37:39] ID="centos"
[2025-11-25 11:37:39] ID_LIKE="rhel fedora"
[2025-11-25 11:37:39] VERSION_ID="7"
[2025-11-25 11:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:37:39] ANSI_COLOR="0;31"
[2025-11-25 11:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:37:39] HOME_URL="https://www.centos.org/"
[2025-11-25 11:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:37:39] 
[2025-11-25 11:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:37:39] 
[2025-11-25 11:37:39] 2025-11-25 16:36:50,333 | INFO     | ***************************************
[2025-11-25 11:37:39] 2025-11-25 16:36:50,838 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 11:37:39] 2025-11-25 16:36:50,889 | INFO     | sufficient remaining disk space (89428852736 B)
[2025-11-25 11:37:39] 2025-11-25 16:36:50,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:37:39] 2025-11-25 16:36:50,890 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:37:39] 2025-11-25 16:36:50,890 | INFO     | update_server=False
[2025-11-25 11:37:39] 2025-11-25 16:36:50,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:37:39] 2025-11-25 16:36:50,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:37:39] 2025-11-25 16:36:50,892 | INFO     | aborting loop
[2025-11-25 11:37:39] 2025-11-25 16:36:51,440 | INFO     | all data control threads have been joined
[2025-11-25 11:37:39] 2025-11-25 16:36:51,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:37:39] 2025-11-25 16:36:51,772 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:37:39] 2025-11-25 16:36:51,896 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:51,910 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:51,923 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:51,935 | INFO     | all payload control threads have been joined
[2025-11-25 11:37:39] 2025-11-25 16:36:51,987 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,200 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,342 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,445 | INFO     | [data] control thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,460 | INFO     | all job control threads have been joined
[2025-11-25 11:37:39] 2025-11-25 16:36:52,823 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,890 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,906 | INFO     | [job] validate thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:52,940 | INFO     | [payload] control thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:53,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:37:39] 2025-11-25 16:36:53,469 | INFO     | [job] control thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:53,736 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:54,110 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:36:55,787 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:37:01,117 | INFO     | job.realtimelogging is not enabled
[2025-11-25 11:37:39] 2025-11-25 16:37:02,123 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:37:39] 2025-11-25 16:37:21,235 | INFO     | PID=3142631 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 11:37:39] 2025-11-25 16:37:21,241 | INFO     | .. there are 33 such processes running
[2025-11-25 11:37:39] 2025-11-25 16:37:21,242 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:37:39] 2025-11-25 16:37:21,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:37:39] 2025-11-25 16:37:21,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:37:39] 2025-11-25 16:37:32,668 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:37:39] 2025-11-25 16:37:33,542 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955585566528)>', '<ExcThread(monitor, started 139955233863424)>']
[2025-11-25 11:37:39] 2025-11-25 16:37:34,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:37:39] 2025-11-25 16:37:34,333 | INFO     | [monitor] control thread has ended
[2025-11-25 11:37:39] 2025-11-25 16:37:38,568 | INFO     | all workflow threads have been joined
[2025-11-25 11:37:39] 2025-11-25 16:37:38,568 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:37:39] 2025-11-25 16:37:38,568 | INFO     | traces error code: 0
[2025-11-25 11:37:39] 2025-11-25 16:37:38,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:37:39] 2025-11-25 16:37:39,101 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:37:39] 2025-11-25 16:37:39,114 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:37:39] 2025-11-25 16:37:39,116 [wrapper] pilotpid: 3142631
[2025-11-25 11:37:39] 2025-11-25 16:37:39,118 [wrapper] Pilot exit status: 0
[2025-11-25 11:37:39] 2025-11-25 16:37:39,201 [wrapper] pandaids: 6895559671
[2025-11-25 11:37:39] 2025-11-25 16:37:39,357 [wrapper] cleanup supervisor_pilot 2602448 3142632
[2025-11-25 11:37:39] 2025-11-25 16:37:39,361 [wrapper] Test setup, not cleaning
[2025-11-25 11:37:39] 2025-11-25 16:37:39,363 [wrapper] apfmon messages muted
[2025-11-25 11:37:39] 2025-11-25 16:37:39,365 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:37:39] 2025-11-25 16:37:39,368 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:37:39]  *** Error codes and diagnostics ***
[2025-11-25 11:37:39]     "exeErrorCode": 0,
[2025-11-25 11:37:39]     "exeErrorDiag": "",
[2025-11-25 11:37:39]     "pilotErrorCode": 0,
[2025-11-25 11:37:39]     "pilotErrorDiag": "",
[2025-11-25 11:37:39]  *** Listing of results directory ***
[2025-11-25 11:37:39] total 1310204
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 05:13 pilot3.tar.gz
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 05:51 queuedata.json
[2025-11-25 11:37:39] -rwx------. 1 boincer umatlas     36292 Nov 24 05:51 runpilot2-wrapper.sh
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas       100 Nov 24 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:37:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 19:02 run_atlas
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas       105 Nov 24 19:02 job.xml
[2025-11-25 11:37:39] -rw-r--r--. 2 boincer umatlas 407930194 Nov 24 19:02 EVNT.47483658._001312.pool.root.1
[2025-11-25 11:37:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 19:02 start_atlas.sh
[2025-11-25 11:37:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 19:02 shared
[2025-11-25 11:37:39] -rw-r--r--. 2 boincer umatlas    590106 Nov 24 19:02 input.tar.gz
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas         0 Nov 24 19:02 boinc_lockfile
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 19:02 pandaJob.out
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas        57 Nov 24 19:02 setup.sh.local
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas    991801 Nov 24 19:02 agis_schedconf.cvmfs.json
[2025-11-25 11:37:39] drwx------. 5 boincer umatlas      4096 Nov 24 19:02 pilot3
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas       533 Nov 25 11:25 boinc_task_state.xml
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas 910219108 Nov 25 11:35 HITS.47556149._002988.pool.root.1
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas      6905 Nov 25 11:36 init_data.xml
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas      1049 Nov 25 11:36 memory_monitor_summary.json
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas   1516240 Nov 25 11:36 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas   2124364 Nov 25 11:36 log.47556149._002988.job.log.tgz.1
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas      8582 Nov 25 11:36 heartbeat.json
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas        95 Nov 25 11:37 pilot_heartbeat.json
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas        29 Nov 25 11:37 wrapper_checkpoint.txt
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 11:37 boinc_mmap_file
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas      4896 Nov 25 11:37 pilotlog.txt
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas   7662094 Nov 25 11:37 log.47556149._002988.job.log.1
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas       353 Nov 25 11:37 output.list
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas       620 Nov 25 11:37 runtime_log
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas   9809920 Nov 25 11:37 result.tar.gz
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas       661 Nov 25 11:37 YHjKDmvLjh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmn1IKDmFL79On.diag
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 11:37 runtime_log.err
[2025-11-25 11:37:39] -rw-r--r--. 1 boincer umatlas     21386 Nov 25 11:37 stderr.txt
[2025-11-25 11:37:39] HITS file was successfully produced:
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas 910219108 Nov 25 11:35 shared/HITS.pool.root.1
[2025-11-25 11:37:39]  *** Contents of shared directory: ***
[2025-11-25 11:37:39] total 1297444
[2025-11-25 11:37:39] -rw-r--r--. 2 boincer umatlas 407930194 Nov 24 19:02 ATLAS.root_0
[2025-11-25 11:37:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 19:02 start_atlas.sh
[2025-11-25 11:37:39] -rw-r--r--. 2 boincer umatlas    590106 Nov 24 19:02 input.tar.gz
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas 910219108 Nov 25 11:35 HITS.pool.root.1
[2025-11-25 11:37:39] -rw-------. 1 boincer umatlas   9809920 Nov 25 11:37 result.tar.gz
11:37:41 (3138556): run_atlas exited; CPU time 196603.074076
11:37:41 (3138556): called boinc_finish(0)

</stderr_txt>
]]>

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