Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:49:48 (3807): wrapper (7.7.26015): starting
16:49:48 (3807): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 16:49:48] Arguments: --nthreads 8
[2025-11-24 16:49:48] Threads: 8
[2025-11-24 16:49:48] Checking for CVMFS
[2025-11-24 16:49:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:49:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:49:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:49:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:49:48] 2.11.2.0 2831 40735 83096 153259 3 82 14409621 20275201 1 130560 0 5100783 99.607 2691194 24872 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 16:49:48] CVMFS is ok
[2025-11-24 16:49:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:49:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:49:48] Further information can be found at the LHC@home message board.
[2025-11-24 16:49:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:49:48] Checking for apptainer binary...
[2025-11-24 16:49:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:49:48] Running /usr/bin/apptainer --version
[2025-11-24 16:49:48] apptainer version 1.3.2-1.el7
[2025-11-24 16:49:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:49:50] c-204-31.aglt2.org
[2025-11-24 16:49:50] apptainer works
[2025-11-24 16:49:50] Set ATHENA_PROC_NUMBER=8
[2025-11-24 16:49:50] Set ATHENA_CORE_NUMBER=8
[2025-11-24 16:49:50] Starting ATLAS job with PandaID=6895359104
[2025-11-24 16:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 05:21:28]  *** The last 200 lines of the pilot log: ***
[2025-11-25 05:21:28] 2025-11-25 10:20:45,078 | INFO     | monitor loop #3308: job 0:6895359104 is in state 'finished'
[2025-11-25 05:21:28] 2025-11-25 10:20:45,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:21:28] 2025-11-25 10:20:45,715 | INFO     | time since job start (45038s) is within the limit (172800.0s)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,253 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 05:21:28] 2025-11-25 10:20:47,260 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2025-11-25 05:21:28] 2025-11-25 10:20:47,263 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895359104/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,264 | INFO     | extracted standard info from prmon json
[2025-11-25 05:21:28] 2025-11-25 10:20:47,264 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 05:21:28] 2025-11-25 10:20:47,264 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 05:21:28] 2025-11-25 10:20:47,278 | INFO     | fitting pss+swap vs Time
[2025-11-25 05:21:28] 2025-11-25 10:20:47,279 | INFO     | sum of square deviations: 124636642787.00287
[2025-11-25 05:21:28] 2025-11-25 10:20:47,291 | INFO     | sum of deviations: 911564937433.0328
[2025-11-25 05:21:28] 2025-11-25 10:20:47,291 | INFO     | mean x: 1764043518.1517615
[2025-11-25 05:21:28] 2025-11-25 10:20:47,291 | INFO     | mean y: 3189033.3211382115
[2025-11-25 05:21:28] 2025-11-25 10:20:47,291 | INFO     | intersect: -12898636491.626684
[2025-11-25 05:21:28] 2025-11-25 10:20:47,292 | INFO     | chi2: 5.437874226976234
[2025-11-25 05:21:28] 2025-11-25 10:20:47,293 | INFO     | sum of square deviations: 122120639987.36426
[2025-11-25 05:21:28] 2025-11-25 10:20:47,304 | INFO     | sum of deviations: 1155301450679.6208
[2025-11-25 05:21:28] 2025-11-25 10:20:47,305 | INFO     | mean x: 1764043365.6562073
[2025-11-25 05:21:28] 2025-11-25 10:20:47,305 | INFO     | mean y: 3203799.8199181445
[2025-11-25 05:21:28] 2025-11-25 10:20:47,305 | INFO     | intersect: -16685227079.802462
[2025-11-25 05:21:28] 2025-11-25 10:20:47,306 | INFO     | chi2: 2.916917036550188
[2025-11-25 05:21:28] 2025-11-25 10:20:47,306 | INFO     | current chi2=2.916917036550188 (change=46.359240489970674 %)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,307 | INFO     | sum of square deviations: 119638686381.51651
[2025-11-25 05:21:28] 2025-11-25 10:20:47,319 | INFO     | sum of deviations: 1203118809334.1558
[2025-11-25 05:21:28] 2025-11-25 10:20:47,320 | INFO     | mean x: 1764043213.1593406
[2025-11-25 05:21:28] 2025-11-25 10:20:47,320 | INFO     | mean y: 3206727.153846154
[2025-11-25 05:21:28] 2025-11-25 10:20:47,320 | INFO     | intersect: -17736486297.076447
[2025-11-25 05:21:28] 2025-11-25 10:20:47,321 | INFO     | chi2: 2.6753135806020247
[2025-11-25 05:21:28] 2025-11-25 10:20:47,321 | INFO     | current chi2=2.6753135806020247 (change=8.282836053297748 %)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,321 | INFO     | right removable region: 727
[2025-11-25 05:21:28] 2025-11-25 10:20:47,322 | INFO     | sum of square deviations: 122120346577.36433
[2025-11-25 05:21:28] 2025-11-25 10:20:47,336 | INFO     | sum of deviations: 676843870514.8938
[2025-11-25 05:21:28] 2025-11-25 10:20:47,336 | INFO     | mean x: 1764043670.6562073
[2025-11-25 05:21:28] 2025-11-25 10:20:47,336 | INFO     | mean y: 3203235.5948158256
[2025-11-25 05:21:28] 2025-11-25 10:20:47,336 | INFO     | intersect: -9773891075.612772
[2025-11-25 05:21:28] 2025-11-25 10:20:47,337 | INFO     | chi2: 2.9554177783107107
[2025-11-25 05:21:28] 2025-11-25 10:20:47,337 | INFO     | current chi2=2.9554177783107107 (change=45.651229599069076 %)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,338 | INFO     | sum of square deviations: 119638188499.51648
[2025-11-25 05:21:28] 2025-11-25 10:20:47,349 | INFO     | sum of deviations: 625482944160.7302
[2025-11-25 05:21:28] 2025-11-25 10:20:47,349 | INFO     | mean x: 1764043823.1593406
[2025-11-25 05:21:28] 2025-11-25 10:20:47,349 | INFO     | mean y: 3206390.105769231
[2025-11-25 05:21:28] 2025-11-25 10:20:47,350 | INFO     | intersect: -9219428438.928894
[2025-11-25 05:21:28] 2025-11-25 10:20:47,350 | INFO     | chi2: 2.901732252553275
[2025-11-25 05:21:28] 2025-11-25 10:20:47,350 | INFO     | current chi2=2.901732252553275 (change=1.816512242412026 %)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,351 | INFO     | left removable region: 20
[2025-11-25 05:21:28] 2025-11-25 10:20:47,351 | INFO     | sum of square deviations: 109580724554.21223
[2025-11-25 05:21:28] 2025-11-25 10:20:47,362 | INFO     | sum of deviations: 859182276747.5936
[2025-11-25 05:21:28] 2025-11-25 10:20:47,362 | INFO     | mean x: 1764043792.6704385
[2025-11-25 05:21:28] 2025-11-25 10:20:47,362 | INFO     | mean y: 3227944.4016973125
[2025-11-25 05:21:28] 2025-11-25 10:20:47,362 | INFO     | intersect: -13827992539.263075
[2025-11-25 05:21:28] 2025-11-25 10:20:47,363 | INFO     | chi2: 0.10767681781077064
[2025-11-25 05:21:28] 2025-11-25 10:20:47,363 | INFO     | current memory leak: 7.84 B/s (using 707 data points, chi2=0.11)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,364 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,364 | INFO     | ..............................
[2025-11-25 05:21:28] 2025-11-25 10:20:47,364 | INFO     | . Timing measurements:
[2025-11-25 05:21:28] 2025-11-25 10:20:47,364 | INFO     | . get job = 0 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | . initial setup = 2 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | . payload setup = 9 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | . stage-in = 0 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | . payload execution = 44996 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | . stage-out = 3 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | . log creation = 0 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,365 | INFO     | ..............................
[2025-11-25 05:21:28] 2025-11-25 10:20:47,564 | INFO     | 
[2025-11-25 05:21:28] 2025-11-25 10:20:47,564 | INFO     | job summary report
[2025-11-25 05:21:28] 2025-11-25 10:20:47,564 | INFO     | --------------------------------------------------
[2025-11-25 05:21:28] 2025-11-25 10:20:47,565 | INFO     | PanDA job id: 6895359104
[2025-11-25 05:21:28] 2025-11-25 10:20:47,565 | INFO     | task id: 47556149
[2025-11-25 05:21:28] 2025-11-25 10:20:47,565 | INFO     | errors: (none)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 05:21:28] 2025-11-25 10:20:47,565 | INFO     | pilot state: finished 
[2025-11-25 05:21:28] 2025-11-25 10:20:47,565 | INFO     | transexitcode: 0
[2025-11-25 05:21:28] 2025-11-25 10:20:47,566 | INFO     | exeerrorcode: 0
[2025-11-25 05:21:28] 2025-11-25 10:20:47,566 | INFO     | exeerrordiag: 
[2025-11-25 05:21:28] 2025-11-25 10:20:47,566 | INFO     | exitcode: 0
[2025-11-25 05:21:28] 2025-11-25 10:20:47,566 | INFO     | exitmsg: OK
[2025-11-25 05:21:28] 2025-11-25 10:20:47,567 | INFO     | cpuconsumptiontime: 350168 s
[2025-11-25 05:21:28] 2025-11-25 10:20:47,567 | INFO     | nevents: 1000
[2025-11-25 05:21:28] 2025-11-25 10:20:47,567 | INFO     | neventsw: 0
[2025-11-25 05:21:28] 2025-11-25 10:20:47,567 | INFO     | pid: 15121
[2025-11-25 05:21:28] 2025-11-25 10:20:47,567 | INFO     | pgrp: 15121
[2025-11-25 05:21:28] 2025-11-25 10:20:47,567 | INFO     | corecount: 8
[2025-11-25 05:21:28] 2025-11-25 10:20:47,568 | INFO     | event service: False
[2025-11-25 05:21:28] 2025-11-25 10:20:47,568 | INFO     | sizes: {0: 2284088, 1: 2284287, 7: 2284549, 11: 2284577, 45009: 2330531, 45013: 2339530, 45015: 2339714, 45023: 2339960}
[2025-11-25 05:21:28] 2025-11-25 10:20:47,568 | INFO     | --------------------------------------------------
[2025-11-25 05:21:28] 2025-11-25 10:20:47,568 | INFO     | 
[2025-11-25 05:21:28] 2025-11-25 10:20:47,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 05:21:28] 2025-11-25 10:20:47,597 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 05:21:28] 2025-11-25 10:20:47,601 | INFO     | job 6895359104 has completed (purged errors)
[2025-11-25 05:21:28] 2025-11-25 10:20:47,601 | INFO     | overall cleanup function is called
[2025-11-25 05:21:28] 2025-11-25 10:20:48,615 | INFO     | --- collectZombieJob: --- 10, [15121]
[2025-11-25 05:21:28] 2025-11-25 10:20:48,616 | INFO     | zombie collector waiting for pid 15121
[2025-11-25 05:21:28] 2025-11-25 10:20:48,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 05:21:28] 2025-11-25 10:20:48,616 | INFO     | collected zombie processes
[2025-11-25 05:21:28] 2025-11-25 10:20:48,616 | INFO     | will attempt to kill all subprocesses of pid=15121
[2025-11-25 05:21:28] 2025-11-25 10:20:48,713 | INFO     | process IDs to be killed: [15121] (in reverse order)
[2025-11-25 05:21:28] 2025-11-25 10:20:48,769 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 05:21:28] 2025-11-25 10:20:48,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 05:21:28] 2025-11-25 10:20:48,773 | INFO     | did not find any defunct processes belonging to 15121
[2025-11-25 05:21:28] 2025-11-25 10:20:48,775 | INFO     | did not find any defunct processes belonging to 15121
[2025-11-25 05:21:28] 2025-11-25 10:20:48,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 05:21:28] 2025-11-25 10:20:48,778 | INFO     | ready for new job
[2025-11-25 05:21:28] 2025-11-25 10:20:48,778 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 05:21:28] 2025-11-25 10:20:48,782 | INFO     | ***************************************
[2025-11-25 05:21:28] 2025-11-25 10:20:48,782 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 05:21:28] 2025-11-25 10:20:48,782 | INFO     | ***************************************
[2025-11-25 05:21:28] 2025-11-25 10:20:48,783 | INFO     | 
[2025-11-25 05:21:28] 2025-11-25 10:20:48,783 | INFO     | architecture information:
[2025-11-25 05:21:28] 2025-11-25 10:20:48,784 | INFO     | executing command: cat /etc/os-release
[2025-11-25 05:21:28] 2025-11-25 10:20:48,802 | INFO     | cat /etc/os-release:
[2025-11-25 05:21:28] NAME="CentOS Linux"
[2025-11-25 05:21:28] VERSION="7 (Core)"
[2025-11-25 05:21:28] ID="centos"
[2025-11-25 05:21:28] ID_LIKE="rhel fedora"
[2025-11-25 05:21:28] VERSION_ID="7"
[2025-11-25 05:21:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 05:21:28] ANSI_COLOR="0;31"
[2025-11-25 05:21:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 05:21:28] HOME_URL="https://www.centos.org/"
[2025-11-25 05:21:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 05:21:28] 
[2025-11-25 05:21:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 05:21:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 05:21:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 05:21:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 05:21:28] 
[2025-11-25 05:21:28] 2025-11-25 10:20:48,802 | INFO     | ***************************************
[2025-11-25 05:21:28] 2025-11-25 10:20:49,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 05:21:28] 2025-11-25 10:20:49,328 | INFO     | sufficient remaining disk space (17422090240 B)
[2025-11-25 05:21:28] 2025-11-25 10:20:49,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 05:21:28] 2025-11-25 10:20:49,329 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 05:21:28] 2025-11-25 10:20:49,329 | INFO     | update_server=False
[2025-11-25 05:21:28] 2025-11-25 10:20:49,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 05:21:28] 2025-11-25 10:20:49,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:21:28] 2025-11-25 10:20:49,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:21:28] 2025-11-25 10:20:49,331 | INFO     | aborting loop
[2025-11-25 05:21:28] 2025-11-25 10:20:49,706 | INFO     | all job control threads have been joined
[2025-11-25 05:21:28] 2025-11-25 10:20:50,233 | INFO     | all data control threads have been joined
[2025-11-25 05:21:28] 2025-11-25 10:20:50,335 | INFO     | [job] retrieve thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,335 | INFO     | [job] queue monitor thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,336 | INFO     | [job] job monitor thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,537 | INFO     | [payload] validate_post thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,548 | INFO     | [payload] failed_post thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 05:21:28] 2025-11-25 10:20:50,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 05:21:28] 2025-11-25 10:20:50,602 | INFO     | all payload control threads have been joined
[2025-11-25 05:21:28] 2025-11-25 10:20:50,662 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,712 | INFO     | [job] control thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:50,953 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:51,065 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:51,075 | INFO     | [data] copytool_in thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:51,238 | INFO     | [data] control thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:51,607 | INFO     | [payload] control thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:51,611 | INFO     | [job] validate thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:52,588 | INFO     | [data] copytool_out thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:20:54,570 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:21:00,053 | INFO     | job.realtimelogging is not enabled
[2025-11-25 05:21:28] 2025-11-25 10:21:01,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 05:21:28] 2025-11-25 10:21:18,840 | INFO     | PID=7950 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 05:21:28] 2025-11-25 10:21:18,840 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 05:21:28] 2025-11-25 10:21:18,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 05:21:28] 2025-11-25 10:21:18,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 05:21:28] 2025-11-25 10:21:22,190 | INFO     | [monitor] cgroup control has ended
[2025-11-25 05:21:28] 2025-11-25 10:21:23,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643916306240)>', '<ExcThread(monitor, started 140642713851648)>']
[2025-11-25 05:21:28] 2025-11-25 10:21:23,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 05:21:28] 2025-11-25 10:21:23,867 | INFO     | [monitor] control thread has ended
[2025-11-25 05:21:28] 2025-11-25 10:21:28,264 | INFO     | all workflow threads have been joined
[2025-11-25 05:21:28] 2025-11-25 10:21:28,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 05:21:28] 2025-11-25 10:21:28,265 | INFO     | traces error code: 0
[2025-11-25 05:21:28] 2025-11-25 10:21:28,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 05:21:28] 2025-11-25 10:21:28,392 [wrapper] ==== pilot stdout END ====
[2025-11-25 05:21:28] 2025-11-25 10:21:28,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 05:21:28] 2025-11-25 10:21:28,402 [wrapper] pilotpid: 7950
[2025-11-25 05:21:28] 2025-11-25 10:21:28,407 [wrapper] Pilot exit status: 0
[2025-11-25 05:21:28] 2025-11-25 10:21:28,424 [wrapper] pandaids: 6895359104
[2025-11-25 05:21:28] 2025-11-25 10:21:28,477 [wrapper] cleanup supervisor_pilot 25333 7951
[2025-11-25 05:21:28] 2025-11-25 10:21:28,483 [wrapper] Test setup, not cleaning
[2025-11-25 05:21:28] 2025-11-25 10:21:28,488 [wrapper] apfmon messages muted
[2025-11-25 05:21:28] 2025-11-25 10:21:28,493 [wrapper] ==== wrapper stdout END ====
[2025-11-25 05:21:28] 2025-11-25 10:21:28,498 [wrapper] ==== wrapper stderr END ====
[2025-11-25 05:21:28]  *** Error codes and diagnostics ***
[2025-11-25 05:21:28]     "exeErrorCode": 0,
[2025-11-25 05:21:28]     "exeErrorDiag": "",
[2025-11-25 05:21:28]     "pilotErrorCode": 0,
[2025-11-25 05:21:28]     "pilotErrorDiag": "",
[2025-11-25 05:21:28]  *** Listing of results directory ***
[2025-11-25 05:21:28] total 1331432
[2025-11-25 05:21:28] -rwx------ 1 boincer umatlas     36292 Nov 23 08:20 runpilot2-wrapper.sh
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 08:20 queuedata.json
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 08:20 pilot3.tar.gz
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas       100 Nov 24 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 05:21:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 16:49 run_atlas
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas       105 Nov 24 16:49 job.xml
[2025-11-25 05:21:28] -rw-r--r-- 2 boincer umatlas 410087965 Nov 24 16:49 EVNT.47483658._001164.pool.root.1
[2025-11-25 05:21:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 16:49 start_atlas.sh
[2025-11-25 05:21:28] drwxrwx--x 2 boincer umatlas      4096 Nov 24 16:49 shared
[2025-11-25 05:21:28] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 16:49 input.tar.gz
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas         0 Nov 24 16:49 boinc_lockfile
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 16:49 pandaJob.out
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas        57 Nov 24 16:49 setup.sh.local
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas    991801 Nov 24 16:50 agis_schedconf.cvmfs.json
[2025-11-25 05:21:28] drwx------ 5 boincer umatlas      4096 Nov 24 16:50 pilot3
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas       533 Nov 25 05:11 boinc_task_state.xml
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas 933014062 Nov 25 05:19 HITS.47556149._001506.pool.root.1
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 05:19 init_data.xml
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas        95 Nov 25 05:20 pilot_heartbeat.json
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas      1064 Nov 25 05:20 memory_monitor_summary.json
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas   1516240 Nov 25 05:20 agis_ddmendpoints.agis.ALL.json
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas   1985041 Nov 25 05:20 log.47556149._001506.job.log.tgz.1
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas      8671 Nov 25 05:20 heartbeat.json
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 05:21 boinc_mmap_file
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas        29 Nov 25 05:21 wrapper_checkpoint.txt
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas      4817 Nov 25 05:21 pilotlog.txt
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas   6192457 Nov 25 05:21 log.47556149._001506.job.log.1
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas       353 Nov 25 05:21 output.list
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas       620 Nov 25 05:21 runtime_log
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas   8202240 Nov 25 05:21 result.tar.gz
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas       668 Nov 25 05:21 zsnMDmZCPh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6vKKDm7cxzbm.diag
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 05:21 runtime_log.err
[2025-11-25 05:21:28] -rw-r--r-- 1 boincer umatlas     21288 Nov 25 05:21 stderr.txt
[2025-11-25 05:21:28] HITS file was successfully produced:
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas 933014062 Nov 25 05:19 shared/HITS.pool.root.1
[2025-11-25 05:21:28]  *** Contents of shared directory: ***
[2025-11-25 05:21:28] total 1320244
[2025-11-25 05:21:28] -rw-r--r-- 2 boincer umatlas 410087965 Nov 24 16:49 ATLAS.root_0
[2025-11-25 05:21:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 16:49 start_atlas.sh
[2025-11-25 05:21:28] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 16:49 input.tar.gz
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas 933014062 Nov 25 05:19 HITS.pool.root.1
[2025-11-25 05:21:28] -rw------- 1 boincer umatlas   8202240 Nov 25 05:21 result.tar.gz
05:21:30 (3807): run_atlas exited; CPU time 348035.682275
05:21:30 (3807): called boinc_finish(0)

</stderr_txt>
]]>

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