Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:47:50 (17238): wrapper (7.7.26015): starting
20:47:50 (17238): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:47:50] Arguments: --nthreads 8
[2025-11-26 20:47:50] Threads: 8
[2025-11-26 20:47:50] Checking for CVMFS
[2025-11-26 20:47:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:47:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:47:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:47:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:47:52] 2.11.2.0 7198 285666 135296 153333 1 85 24199231 25165824 1288 130560 11 127188454 99.878 80342004 2983 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 20:47:52] CVMFS is ok
[2025-11-26 20:47:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:47:52] Checking for apptainer binary...
[2025-11-26 20:47:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:47:52] Running /usr/bin/apptainer --version
[2025-11-26 20:47:53] apptainer version 1.3.2-1.el7
[2025-11-26 20:47:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:48:06] cg-vwn468.simple-grid.lan
[2025-11-26 20:48:06] apptainer works
[2025-11-26 20:48:06] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:48:06] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:48:06] Starting ATLAS job with PandaID=6893859989
[2025-11-26 20:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:52:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:52:34] 2025-11-27 17:51:47,777 | INFO     | time since job start (79182s) is within the limit (172800.0s)
[2025-11-27 18:52:34] 2025-11-27 17:51:49,487 | INFO     | monitor loop #5358: job 0:6893859989 is in state 'finished'
[2025-11-27 18:52:34] 2025-11-27 17:51:49,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:52:34] 2025-11-27 17:51:49,788 | INFO     | time since job start (79184s) is within the limit (172800.0s)
[2025-11-27 18:52:34] 2025-11-27 17:51:51,798 | INFO     | time since job start (79186s) is within the limit (172800.0s)
[2025-11-27 18:52:34] 2025-11-27 17:51:51,992 | INFO     | monitor loop #5359: job 0:6893859989 is in state 'finished'
[2025-11-27 18:52:34] 2025-11-27 17:51:51,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:52:34] 2025-11-27 17:51:53,806 | INFO     | time since job start (79188s) is within the limit (172800.0s)
[2025-11-27 18:52:34] 2025-11-27 17:51:54,497 | INFO     | monitor loop #5360: job 0:6893859989 is in state 'finished'
[2025-11-27 18:52:34] 2025-11-27 17:51:54,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:52:34] 2025-11-27 17:51:55,813 | INFO     | time since job start (79190s) is within the limit (172800.0s)
[2025-11-27 18:52:34] 2025-11-27 17:51:57,003 | INFO     | monitor loop #5361: job 0:6893859989 is in state 'finished'
[2025-11-27 18:52:34] 2025-11-27 17:51:57,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:52:34] 2025-11-27 17:51:57,669 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:52:34] 2025-11-27 17:51:57,670 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2025-11-27 18:52:34] 2025-11-27 17:51:57,672 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893859989/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:52:34] 2025-11-27 17:51:57,672 | INFO     | extracted standard info from prmon json
[2025-11-27 18:52:34] 2025-11-27 17:51:57,673 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:52:34] 2025-11-27 17:51:57,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:52:34] 2025-11-27 17:51:57,705 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:52:34] 2025-11-27 17:51:57,707 | INFO     | sum of square deviations: 662560435475.5524
[2025-11-27 18:52:34] 2025-11-27 17:51:57,767 | INFO     | sum of deviations: 2869182742929.1484
[2025-11-27 18:52:34] 2025-11-27 17:51:57,767 | INFO     | mean x: 1764226504.5186336
[2025-11-27 18:52:34] 2025-11-27 17:51:57,767 | INFO     | mean y: 2819068.0147515526
[2025-11-27 18:52:34] 2025-11-27 17:51:57,767 | INFO     | intersect: -7637070020.366913
[2025-11-27 18:52:34] 2025-11-27 17:51:57,769 | INFO     | chi2: 29.987295747866597
[2025-11-27 18:52:34] 2025-11-27 17:51:57,770 | INFO     | sum of square deviations: 654874589190.3447
[2025-11-27 18:52:34] 2025-11-27 17:51:57,827 | INFO     | time since job start (79192s) is within the limit (172800.0s)
[2025-11-27 18:52:34] 2025-11-27 17:51:57,928 | INFO     | sum of deviations: 3300711118588.362
[2025-11-27 18:52:34] 2025-11-27 17:51:57,928 | INFO     | mean x: 1764226352.0226033
[2025-11-27 18:52:34] 2025-11-27 17:51:57,928 | INFO     | mean y: 2827629.539360873
[2025-11-27 18:52:34] 2025-11-27 17:51:57,928 | INFO     | intersect: -8889258934.740248
[2025-11-27 18:52:34] 2025-11-27 17:51:57,930 | INFO     | chi2: 26.648741588323922
[2025-11-27 18:52:34] 2025-11-27 17:51:57,930 | INFO     | current chi2=26.648741588323922 (change=11.133228509877192 %)
[2025-11-27 18:52:34] 2025-11-27 17:51:57,930 | INFO     | right removable region: 1282
[2025-11-27 18:52:34] 2025-11-27 17:51:57,932 | INFO     | sum of square deviations: 654873788870.3446
[2025-11-27 18:52:34] 2025-11-27 17:51:57,974 | INFO     | sum of deviations: 2317920075837.5547
[2025-11-27 18:52:34] 2025-11-27 17:51:57,975 | INFO     | mean x: 1764226657.0226033
[2025-11-27 18:52:34] 2025-11-27 17:51:57,975 | INFO     | mean y: 2830005.0841777087
[2025-11-27 18:52:34] 2025-11-27 17:51:57,975 | INFO     | intersect: -6241634892.029144
[2025-11-27 18:52:34] 2025-11-27 17:51:57,976 | INFO     | chi2: 24.885132326604968
[2025-11-27 18:52:34] 2025-11-27 17:51:57,976 | INFO     | current chi2=24.885132326604968 (change=17.01441658547892 %)
[2025-11-27 18:52:34] 2025-11-27 17:51:57,977 | INFO     | left removable region: 10
[2025-11-27 18:52:34] 2025-11-27 17:51:57,978 | INFO     | sum of square deviations: 638173857166.7406
[2025-11-27 18:52:34] 2025-11-27 17:51:58,026 | INFO     | sum of deviations: 2346824292513.742
[2025-11-27 18:52:34] 2025-11-27 17:51:58,026 | INFO     | mean x: 1764226626.5314465
[2025-11-27 18:52:34] 2025-11-27 17:51:58,026 | INFO     | mean y: 2850540.6438679243
[2025-11-27 18:52:34] 2025-11-27 17:51:58,026 | INFO     | intersect: -6484926823.0750475
[2025-11-27 18:52:34] 2025-11-27 17:51:58,028 | INFO     | chi2: 16.691790941992757
[2025-11-27 18:52:34] 2025-11-27 17:51:58,028 | INFO     | current memory leak: 3.68 B/s (using 1272 data points, chi2=16.69)
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | could have reported an average CPU frequency of 2250 MHz (44 samples)
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | ..............................
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | . Timing measurements:
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | . get job = 0 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | . initial setup = 3 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | . payload setup = 164 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,029 | INFO     | . stage-in = 0 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,030 | INFO     | . payload execution = 78726 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,030 | INFO     | . stage-out = 11 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,030 | INFO     | . log creation = 1 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,030 | INFO     | ..............................
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | 
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | job summary report
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | --------------------------------------------------
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | PanDA job id: 6893859989
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | task id: 47523449
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | errors: (none)
[2025-11-27 18:52:34] 2025-11-27 17:51:58,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | pilot state: finished 
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | transexitcode: 0
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | exeerrorcode: 0
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | exeerrordiag: 
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | exitcode: 0
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | exitmsg: OK
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | cpuconsumptiontime: 294635 s
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | nevents: 1000
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | neventsw: 0
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | pid: 27579
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | pgrp: 27579
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | corecount: 8
[2025-11-27 18:52:34] 2025-11-27 17:51:58,141 | INFO     | event service: False
[2025-11-27 18:52:34] 2025-11-27 17:51:58,142 | INFO     | sizes: {0: 2284087, 1: 2284342, 2: 2284342, 12: 2284370, 23: 2284398, 34: 2284426, 44: 2284582, 55: 2284610, 66: 2284638, 76: 2284666, 87: 2284722, 92: 2285292, 98
[2025-11-27 18:52:34] 2025-11-27 17:51:58,142 | INFO     | --------------------------------------------------
[2025-11-27 18:52:34] 2025-11-27 17:51:58,142 | INFO     | 
[2025-11-27 18:52:34] 2025-11-27 17:51:58,142 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-27 18:52:34] 2025-11-27 17:51:59,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,038 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | job 6893859989 has completed (purged errors)
[2025-11-27 18:52:34] 2025-11-27 17:51:59,040 | INFO     | overall cleanup function is called
[2025-11-27 18:52:34] 2025-11-27 17:52:00,062 | INFO     | --- collectZombieJob: --- 10, [27579]
[2025-11-27 18:52:34] 2025-11-27 17:52:00,062 | INFO     | zombie collector waiting for pid 27579
[2025-11-27 18:52:34] 2025-11-27 17:52:00,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:52:34] 2025-11-27 17:52:00,062 | INFO     | collected zombie processes
[2025-11-27 18:52:34] 2025-11-27 17:52:00,062 | INFO     | will attempt to kill all subprocesses of pid=27579
[2025-11-27 18:52:34] 2025-11-27 17:52:00,167 | INFO     | process IDs to be killed: [27579] (in reverse order)
[2025-11-27 18:52:34] 2025-11-27 17:52:00,778 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:52:34] 2025-11-27 17:52:00,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:52:34] 2025-11-27 17:52:00,781 | INFO     | did not find any defunct processes belonging to 27579
[2025-11-27 18:52:34] 2025-11-27 17:52:00,783 | INFO     | did not find any defunct processes belonging to 27579
[2025-11-27 18:52:34] 2025-11-27 17:52:00,788 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:52:34] 2025-11-27 17:52:00,788 | INFO     | ready for new job
[2025-11-27 18:52:34] 2025-11-27 17:52:00,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:52:34] 2025-11-27 17:52:00,793 | INFO     | ***************************************
[2025-11-27 18:52:34] 2025-11-27 17:52:00,793 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:52:34] 2025-11-27 17:52:00,793 | INFO     | ***************************************
[2025-11-27 18:52:34] 2025-11-27 17:52:00,793 | INFO     | 
[2025-11-27 18:52:34] 2025-11-27 17:52:00,794 | INFO     | pilot is running in a VM
[2025-11-27 18:52:34] 2025-11-27 17:52:00,794 | INFO     | architecture information:
[2025-11-27 18:52:34] 2025-11-27 17:52:00,801 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:52:34] 2025-11-27 17:52:01,014 | INFO     | cat /etc/os-release:
[2025-11-27 18:52:34] NAME="CentOS Linux"
[2025-11-27 18:52:34] VERSION="7 (Core)"
[2025-11-27 18:52:34] ID="centos"
[2025-11-27 18:52:34] ID_LIKE="rhel fedora"
[2025-11-27 18:52:34] VERSION_ID="7"
[2025-11-27 18:52:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:52:34] ANSI_COLOR="0;31"
[2025-11-27 18:52:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:52:34] HOME_URL="https://www.centos.org/"
[2025-11-27 18:52:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:52:34] 
[2025-11-27 18:52:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:52:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:52:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:52:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:52:34] 
[2025-11-27 18:52:34] 2025-11-27 17:52:01,014 | INFO     | ***************************************
[2025-11-27 18:52:34] 2025-11-27 17:52:01,518 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-27 18:52:34] 2025-11-27 17:52:01,750 | INFO     | sufficient remaining disk space (495215181824 B)
[2025-11-27 18:52:34] 2025-11-27 17:52:01,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:52:34] 2025-11-27 17:52:01,750 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:52:34] 2025-11-27 17:52:01,750 | INFO     | update_server=False
[2025-11-27 18:52:34] 2025-11-27 17:52:01,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:52:34] 2025-11-27 17:52:02,026 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 18:52:34] 2025-11-27 17:52:02,026 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 18:52:34] 2025-11-27 17:52:02,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:52:34] 2025-11-27 17:52:02,026 | INFO     | will abort loop
[2025-11-27 18:52:34] 2025-11-27 17:52:02,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:52:34] 2025-11-27 17:52:02,117 | INFO     | all data control threads have been joined
[2025-11-27 18:52:34] 2025-11-27 17:52:02,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:52:34] 2025-11-27 17:52:02,532 | INFO     | all job control threads have been joined
[2025-11-27 18:52:34] 2025-11-27 17:52:02,605 | INFO     | all payload control threads have been joined
[2025-11-27 18:52:34] 2025-11-27 17:52:02,756 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,032 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,097 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,122 | INFO     | [data] control thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:52:34] 2025-11-27 17:52:03,444 | INFO     | [job] validate thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,538 | INFO     | [job] control thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,611 | INFO     | [payload] control thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,843 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,852 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,858 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:03,861 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:04,059 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:04,171 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:06,370 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:52:34] 2025-11-27 17:52:22,877 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:52:34] 2025-11-27 17:52:22,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664754177856)>', '<ExcThread(monitor, started 140664314513152)>']
[2025-11-27 18:52:34] 2025-11-27 17:52:27,944 | INFO     | all workflow threads have been joined
[2025-11-27 18:52:34] 2025-11-27 17:52:27,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:52:34] 2025-11-27 17:52:27,944 | INFO     | traces error code: 0
[2025-11-27 18:52:34] 2025-11-27 17:52:27,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:52:34] 2025-11-27 17:52:31,003 | INFO     | PID=21036 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 18:52:34] 2025-11-27 17:52:31,003 | INFO     | .. there are 9 such processes running
[2025-11-27 18:52:34] 2025-11-27 17:52:31,004 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:52:34] 2025-11-27 17:52:31,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:52:34] 2025-11-27 17:52:31,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:52:34] 2025-11-27 17:52:31,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:52:34] 2025-11-27 17:52:31,004 | INFO     | [monitor] control thread has ended
[2025-11-27 18:52:34] 2025-11-27 17:52:31,464 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:52:34] 2025-11-27 17:52:31,557 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:52:34] 2025-11-27 17:52:31,658 [wrapper] pilotpid: 21036
[2025-11-27 18:52:34] 2025-11-27 17:52:31,736 [wrapper] Pilot exit status: 0
[2025-11-27 18:52:34] 2025-11-27 17:52:32,135 [wrapper] pandaids: 6893859989
[2025-11-27 18:52:34] 2025-11-27 17:52:32,698 [wrapper] cleanup supervisor_pilot 21445 21037
[2025-11-27 18:52:34] 2025-11-27 17:52:32,745 [wrapper] Test setup, not cleaning
[2025-11-27 18:52:34] 2025-11-27 17:52:32,824 [wrapper] apfmon messages muted
[2025-11-27 18:52:34] 2025-11-27 17:52:32,856 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:52:34] 2025-11-27 17:52:32,931 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:52:34]  *** Error codes and diagnostics ***
[2025-11-27 18:52:34]     "exeErrorCode": 0,
[2025-11-27 18:52:34]     "exeErrorDiag": "",
[2025-11-27 18:52:34]     "pilotErrorCode": 0,
[2025-11-27 18:52:34]     "pilotErrorDiag": "",
[2025-11-27 18:52:34]  *** Listing of results directory ***
[2025-11-27 18:52:34] total 1334472
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-27 18:52:34] -rwx------. 1 boinc boinc     36292 Nov 20 14:32 runpilot2-wrapper.sh
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc      5112 Nov 20 14:32 queuedata.json
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc       100 Nov 26 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:52:34] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 20:47 run_atlas
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc       105 Nov 26 20:47 job.xml
[2025-11-27 18:52:34] -rw-r--r--. 2 boinc boinc 409367504 Nov 26 20:47 EVNT.47493127._000537.pool.root.1
[2025-11-27 18:52:34] -rw-r--r--. 2 boinc boinc     15847 Nov 26 20:47 start_atlas.sh
[2025-11-27 18:52:34] drwxrwx--x. 2 boinc boinc        68 Nov 26 20:47 shared
[2025-11-27 18:52:34] -rw-r--r--. 2 boinc boinc    590100 Nov 26 20:47 input.tar.gz
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc      6392 Nov 26 20:47 init_data.xml
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc         0 Nov 26 20:47 boinc_lockfile
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc      2785 Nov 26 20:48 pandaJob.out
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc    991522 Nov 26 20:52 agis_schedconf.cvmfs.json
[2025-11-27 18:52:34] drwx------. 5 boinc boinc      4096 Nov 26 20:52 pilot3
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc       533 Nov 27 18:24 boinc_task_state.xml
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc 927227080 Nov 27 18:49 HITS.47523449._005364.pool.root.1
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc      1028 Nov 27 18:50 memory_monitor_summary.json
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc   1516240 Nov 27 18:50 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc   2404258 Nov 27 18:50 log.47523449._005364.job.log.tgz.1
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc      7939 Nov 27 18:51 heartbeat.json
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc      8192 Nov 27 18:52 boinc_mmap_file
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc        29 Nov 27 18:52 wrapper_checkpoint.txt
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc       820 Nov 27 18:52 pilotlog.txt
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc        95 Nov 27 18:52 pilot_heartbeat.json
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc  10601889 Nov 27 18:52 log.47523449._005364.job.log.1
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc       353 Nov 27 18:52 output.list
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc       620 Nov 27 18:52 runtime_log
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc  13025280 Nov 27 18:52 result.tar.gz
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc      8817 Nov 27 18:52 runtime_log.err
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc       662 Nov 27 18:52 2XHKDmLxJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6iGKDmY1PqGm.diag
[2025-11-27 18:52:34] -rw-r--r--. 1 boinc boinc     21417 Nov 27 18:52 stderr.txt
[2025-11-27 18:52:34] HITS file was successfully produced:
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc 927227080 Nov 27 18:49 shared/HITS.pool.root.1
[2025-11-27 18:52:34]  *** Contents of shared directory: ***
[2025-11-27 18:52:34] total 1318588
[2025-11-27 18:52:34] -rw-r--r--. 2 boinc boinc 409367504 Nov 26 20:47 ATLAS.root_0
[2025-11-27 18:52:34] -rw-r--r--. 2 boinc boinc     15847 Nov 26 20:47 start_atlas.sh
[2025-11-27 18:52:34] -rw-r--r--. 2 boinc boinc    590100 Nov 26 20:47 input.tar.gz
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc 927227080 Nov 27 18:49 HITS.pool.root.1
[2025-11-27 18:52:34] -rw-------. 1 boinc boinc  13025280 Nov 27 18:52 result.tar.gz
18:52:35 (17238): run_atlas exited; CPU time 295112.853054
18:52:35 (17238): called boinc_finish(0)

</stderr_txt>
]]>

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