Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:03 (2118737): wrapper (7.7.26015): starting
22:52:03 (2118737): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 22:52:03] Arguments: --nthreads 12
[2025-11-25 22:52:03] Threads: 12
[2025-11-25 22:52:03] Checking for CVMFS
[2025-11-25 22:52:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 22:52:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 22:52:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 22:52:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 22:52:04] 2.13.3.0 23050 6059 93824 153298 2 96 3494423 4097025 1044 130560 0 4723003 99.869 858276 22721 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 22:52:04] CVMFS is ok
[2025-11-25 22:52:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 22:52:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 22:52:04] Further information can be found at the LHC@home message board.
[2025-11-25 22:52:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 22:52:04] Checking for apptainer binary...
[2025-11-25 22:52:04] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-25 22:52:04] apptainer is not installed, using version from CVMFS
[2025-11-25 22:52:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 22:52:04] pckelar3.cern.ch
[2025-11-25 22:52:04] apptainer works
[2025-11-25 22:52:04] Set ATHENA_PROC_NUMBER=12
[2025-11-25 22:52:04] Set ATHENA_CORE_NUMBER=12
[2025-11-25 22:52:04] Starting ATLAS job with PandaID=6895360316
[2025-11-25 22:52:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:05:35]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:05:35] 2025-11-26 10:04:34,942 | INFO     | sum of deviations: 1454069704150.9023
[2025-11-26 11:05:35] 2025-11-26 10:04:34,942 | INFO     | mean x: 1764129496.45
[2025-11-26 11:05:35] 2025-11-26 10:04:34,942 | INFO     | mean y: 3529228.275
[2025-11-26 11:05:35] 2025-11-26 10:04:34,943 | INFO     | intersect: -22160124861.27772
[2025-11-26 11:05:35] 2025-11-26 10:04:34,944 | INFO     | chi2: 6.812060232723605
[2025-11-26 11:05:35] 2025-11-26 10:04:34,945 | INFO     | sum of square deviations: 113343268355.65602
[2025-11-26 11:05:35] 2025-11-26 10:04:34,961 | INFO     | sum of deviations: 1725303177073.088
[2025-11-26 11:05:35] 2025-11-26 10:04:34,961 | INFO     | mean x: 1764129343.9566433
[2025-11-26 11:05:35] 2025-11-26 10:04:34,961 | INFO     | mean y: 3546497.0027972027
[2025-11-26 11:05:35] 2025-11-26 10:04:34,961 | INFO     | intersect: -26849905022.902798
[2025-11-26 11:05:35] 2025-11-26 10:04:34,962 | INFO     | chi2: 4.044558129000753
[2025-11-26 11:05:35] 2025-11-26 10:04:34,963 | INFO     | current chi2=4.044558129000753 (change=40.62650665401335 %)
[2025-11-26 11:05:35] 2025-11-26 10:04:34,964 | INFO     | sum of square deviations: 110982232698.5478
[2025-11-26 11:05:35] 2025-11-26 10:04:34,980 | INFO     | sum of deviations: 1895678405484.4272
[2025-11-26 11:05:35] 2025-11-26 10:04:34,980 | INFO     | mean x: 1764129191.4633803
[2025-11-26 11:05:35] 2025-11-26 10:04:34,980 | INFO     | mean y: 3557494.4971830985
[2025-11-26 11:05:35] 2025-11-26 10:04:34,981 | INFO     | intersect: -30129388396.26963
[2025-11-26 11:05:35] 2025-11-26 10:04:34,982 | INFO     | chi2: 2.7955271785317177
[2025-11-26 11:05:35] 2025-11-26 10:04:34,982 | INFO     | current chi2=2.7955271785317177 (change=30.881765340769622 %)
[2025-11-26 11:05:35] 2025-11-26 10:04:34,983 | INFO     | sum of square deviations: 108654134664.24979
[2025-11-26 11:05:35] 2025-11-26 10:04:34,999 | INFO     | sum of deviations: 1939784006125.3774
[2025-11-26 11:05:35] 2025-11-26 10:04:34,999 | INFO     | mean x: 1764129038.967376
[2025-11-26 11:05:35] 2025-11-26 10:04:34,999 | INFO     | mean y: 3560368.7120567374
[2025-11-26 11:05:35] 2025-11-26 10:04:34,999 | INFO     | intersect: -31491138890.589954
[2025-11-26 11:05:35] 2025-11-26 10:04:35,000 | INFO     | chi2: 2.507172215667629
[2025-11-26 11:05:35] 2025-11-26 10:04:35,001 | INFO     | current chi2=2.507172215667629 (change=10.314868876200313 %)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,001 | INFO     | right removable region: 704
[2025-11-26 11:05:35] 2025-11-26 10:04:35,002 | INFO     | sum of square deviations: 113342894792.5678
[2025-11-26 11:05:35] 2025-11-26 10:04:35,018 | INFO     | sum of deviations: 1206449253732.2847
[2025-11-26 11:05:35] 2025-11-26 10:04:35,019 | INFO     | mean x: 1764129648.9552448
[2025-11-26 11:05:35] 2025-11-26 10:04:35,019 | INFO     | mean y: 3544971.9776223777
[2025-11-26 11:05:35] 2025-11-26 10:04:35,019 | INFO     | intersect: -18774278749.254993
[2025-11-26 11:05:35] 2025-11-26 10:04:35,020 | INFO     | chi2: 4.560514421742497
[2025-11-26 11:05:35] 2025-11-26 10:04:35,020 | INFO     | current chi2=4.560514421742497 (change=33.052347367176644 %)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,021 | INFO     | sum of square deviations: 110981616664.14612
[2025-11-26 11:05:35] 2025-11-26 10:04:35,038 | INFO     | sum of deviations: 1133998250786.5388
[2025-11-26 11:05:35] 2025-11-26 10:04:35,038 | INFO     | mean x: 1764129801.456338
[2025-11-26 11:05:35] 2025-11-26 10:04:35,038 | INFO     | mean y: 3549649.7915492957
[2025-11-26 11:05:35] 2025-11-26 10:04:35,038 | INFO     | intersect: -18022139370.993656
[2025-11-26 11:05:35] 2025-11-26 10:04:35,039 | INFO     | chi2: 4.488203348899577
[2025-11-26 11:05:35] 2025-11-26 10:04:35,039 | INFO     | current chi2=4.488203348899577 (change=1.585590268022687 %)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,040 | INFO     | left removable region: 20
[2025-11-26 11:05:35] 2025-11-26 10:04:35,041 | INFO     | sum of square deviations: 99230619500.71378
[2025-11-26 11:05:35] 2025-11-26 10:04:35,056 | INFO     | sum of deviations: 1514436680830.0518
[2025-11-26 11:05:35] 2025-11-26 10:04:35,056 | INFO     | mean x: 1764129618.4795322
[2025-11-26 11:05:35] 2025-11-26 10:04:35,056 | INFO     | mean y: 3588239.289473684
[2025-11-26 11:05:35] 2025-11-26 10:04:35,056 | INFO     | intersect: -26920184054.04898
[2025-11-26 11:05:35] 2025-11-26 10:04:35,057 | INFO     | chi2: 0.13911566847783444
[2025-11-26 11:05:35] 2025-11-26 10:04:35,058 | INFO     | current memory leak: 15.26 B/s (using 684 data points, chi2=0.14)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,059 | INFO     | could have reported an average CPU frequency of 2803 MHz (27 samples)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,059 | INFO     | ..............................
[2025-11-26 11:05:35] 2025-11-26 10:04:35,059 | INFO     | . Timing measurements:
[2025-11-26 11:05:35] 2025-11-26 10:04:35,059 | INFO     | . get job = 0 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,059 | INFO     | . initial setup = 1 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,060 | INFO     | . payload setup = 8 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,060 | INFO     | . stage-in = 0 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,060 | INFO     | . payload execution = 43901 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,060 | INFO     | . stage-out = 2 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,060 | INFO     | . log creation = 0 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,060 | INFO     | ..............................
[2025-11-26 11:05:35] 2025-11-26 10:04:35,439 | INFO     | time since job start (43941s) is within the limit (172800.0s)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,686 | INFO     | 
[2025-11-26 11:05:35] 2025-11-26 10:04:35,686 | INFO     | job summary report
[2025-11-26 11:05:35] 2025-11-26 10:04:35,686 | INFO     | --------------------------------------------------
[2025-11-26 11:05:35] 2025-11-26 10:04:35,686 | INFO     | PanDA job id: 6895360316
[2025-11-26 11:05:35] 2025-11-26 10:04:35,687 | INFO     | task id: 47556137
[2025-11-26 11:05:35] 2025-11-26 10:04:35,687 | INFO     | errors: (none)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:05:35] 2025-11-26 10:04:35,687 | INFO     | pilot state: finished 
[2025-11-26 11:05:35] 2025-11-26 10:04:35,687 | INFO     | transexitcode: 0
[2025-11-26 11:05:35] 2025-11-26 10:04:35,687 | INFO     | exeerrorcode: 0
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | exeerrordiag: 
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | exitcode: 0
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | exitmsg: OK
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | cpuconsumptiontime: 510144 s
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | nevents: 1000
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | neventsw: 0
[2025-11-26 11:05:35] 2025-11-26 10:04:35,688 | INFO     | pid: 2130095
[2025-11-26 11:05:35] 2025-11-26 10:04:35,689 | INFO     | pgrp: 2130095
[2025-11-26 11:05:35] 2025-11-26 10:04:35,689 | INFO     | corecount: 12
[2025-11-26 11:05:35] 2025-11-26 10:04:35,689 | INFO     | event service: False
[2025-11-26 11:05:35] 2025-11-26 10:04:35,689 | INFO     | sizes: {0: 2284144, 1: 2284343, 5: 2284605, 12: 2284661, 43913: 2329603, 43916: 2338597, 43917: 2338781, 43923: 2339027}
[2025-11-26 11:05:35] 2025-11-26 10:04:35,689 | INFO     | --------------------------------------------------
[2025-11-26 11:05:35] 2025-11-26 10:04:35,689 | INFO     | 
[2025-11-26 11:05:35] 2025-11-26 10:04:35,690 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-26 11:05:35] 2025-11-26 10:04:35,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,712 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,712 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,712 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,713 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,713 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,713 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,713 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,714 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,714 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,714 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,714 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,714 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,714 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,715 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,715 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,715 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,715 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:05:35] 2025-11-26 10:04:35,715 | INFO     | job 6895360316 has completed (purged errors)
[2025-11-26 11:05:35] 2025-11-26 10:04:35,716 | INFO     | overall cleanup function is called
[2025-11-26 11:05:35] 2025-11-26 10:04:36,674 | INFO     | PID=2122569 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 11:05:35] 2025-11-26 10:04:36,674 | INFO     | .. there are 2 such processes running
[2025-11-26 11:05:35] 2025-11-26 10:04:36,739 | INFO     | --- collectZombieJob: --- 10, [2130095]
[2025-11-26 11:05:35] 2025-11-26 10:04:36,739 | INFO     | zombie collector waiting for pid 2130095
[2025-11-26 11:05:35] 2025-11-26 10:04:36,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:05:35] 2025-11-26 10:04:36,739 | INFO     | collected zombie processes
[2025-11-26 11:05:35] 2025-11-26 10:04:36,740 | INFO     | will attempt to kill all subprocesses of pid=2130095
[2025-11-26 11:05:35] 2025-11-26 10:04:36,926 | INFO     | process IDs to be killed: [2130095] (in reverse order)
[2025-11-26 11:05:35] 2025-11-26 10:04:36,986 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:05:35] 2025-11-26 10:04:36,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:05:35] 2025-11-26 10:04:36,993 | INFO     | did not find any defunct processes belonging to 2130095
[2025-11-26 11:05:35] 2025-11-26 10:04:36,999 | INFO     | did not find any defunct processes belonging to 2130095
[2025-11-26 11:05:35] 2025-11-26 10:04:37,000 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:05:35] 2025-11-26 10:04:37,000 | INFO     | ready for new job
[2025-11-26 11:05:35] 2025-11-26 10:04:37,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:05:35] 2025-11-26 10:04:37,004 | INFO     | ***************************************
[2025-11-26 11:05:35] 2025-11-26 10:04:37,004 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:05:35] 2025-11-26 10:04:37,004 | INFO     | ***************************************
[2025-11-26 11:05:35] 2025-11-26 10:04:37,004 | INFO     | 
[2025-11-26 11:05:35] 2025-11-26 10:04:37,006 | INFO     | architecture information:
[2025-11-26 11:05:35] 2025-11-26 10:04:37,006 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:05:35] 2025-11-26 10:04:37,019 | INFO     | cat /etc/os-release:
[2025-11-26 11:05:35] NAME="CentOS Linux"
[2025-11-26 11:05:35] VERSION="7 (Core)"
[2025-11-26 11:05:35] ID="centos"
[2025-11-26 11:05:35] ID_LIKE="rhel fedora"
[2025-11-26 11:05:35] VERSION_ID="7"
[2025-11-26 11:05:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:05:35] ANSI_COLOR="0;31"
[2025-11-26 11:05:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:05:35] HOME_URL="https://www.centos.org/"
[2025-11-26 11:05:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:05:35] 
[2025-11-26 11:05:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:05:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:05:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:05:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:05:35] 
[2025-11-26 11:05:35] 2025-11-26 10:04:37,019 | INFO     | ***************************************
[2025-11-26 11:05:35] 2025-11-26 10:04:37,522 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-26 11:05:35] 2025-11-26 10:04:37,539 | INFO     | sufficient remaining disk space (562845188096 B)
[2025-11-26 11:05:35] 2025-11-26 10:04:37,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:05:35] 2025-11-26 10:04:37,540 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:05:35] 2025-11-26 10:04:37,540 | INFO     | update_server=False
[2025-11-26 11:05:35] 2025-11-26 10:04:37,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:05:35] 2025-11-26 10:04:37,540 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 11:05:35] 2025-11-26 10:04:37,541 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:05:35] 2025-11-26 10:04:37,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:05:35] 2025-11-26 10:04:37,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:05:35] 2025-11-26 10:04:37,985 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 11:05:35] 2025-11-26 10:04:37,985 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 11:05:35] 2025-11-26 10:04:37,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:05:35] 2025-11-26 10:04:37,986 | INFO     | will abort loop
[2025-11-26 11:05:35] 2025-11-26 10:04:38,185 | INFO     | all data control threads have been joined
[2025-11-26 11:05:35] 2025-11-26 10:04:38,433 | INFO     | all job control threads have been joined
[2025-11-26 11:05:35] 2025-11-26 10:04:38,546 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:38,592 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:38,715 | INFO     | all payload control threads have been joined
[2025-11-26 11:05:35] 2025-11-26 10:04:38,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:38,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:05:35] 2025-11-26 10:04:38,778 | INFO     | [job] validate thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:38,988 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,191 | INFO     | [data] control thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,192 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,353 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,439 | INFO     | [job] control thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,658 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,668 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,717 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:39,720 | INFO     | [payload] control thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:40,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:05:35] 2025-11-26 10:04:40,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:05:35] 2025-11-26 10:04:40,759 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:41,234 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:04:44,268 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:05:35] 2025-11-26 10:05:27,857 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:05:35] 2025-11-26 10:05:29,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992260421440)>', '<ExcThread(monitor, started 139991506220800)>']
[2025-11-26 11:05:35] 2025-11-26 10:05:29,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:05:35] 2025-11-26 10:05:29,778 | INFO     | [monitor] control thread has ended
[2025-11-26 11:05:35] 2025-11-26 10:05:34,745 | INFO     | all workflow threads have been joined
[2025-11-26 11:05:35] 2025-11-26 10:05:34,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:05:35] 2025-11-26 10:05:34,746 | INFO     | traces error code: 0
[2025-11-26 11:05:35] 2025-11-26 10:05:34,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:05:35] 2025-11-26 10:05:34,874 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:05:35] 2025-11-26 10:05:34,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:05:35] 2025-11-26 10:05:34,879 [wrapper] pilotpid: 2122569
[2025-11-26 11:05:35] 2025-11-26 10:05:34,882 [wrapper] Pilot exit status: 0
[2025-11-26 11:05:35] 2025-11-26 10:05:34,892 [wrapper] pandaids: 6895360316
[2025-11-26 11:05:35] 2025-11-26 10:05:34,932 [wrapper] cleanup supervisor_pilot 2363049 2122570
[2025-11-26 11:05:35] 2025-11-26 10:05:34,934 [wrapper] Test setup, not cleaning
[2025-11-26 11:05:35] 2025-11-26 10:05:34,937 [wrapper] apfmon messages muted
[2025-11-26 11:05:35] 2025-11-26 10:05:34,940 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:05:35] 2025-11-26 10:05:34,942 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:05:35]  *** Error codes and diagnostics ***
[2025-11-26 11:05:35]     "exeErrorCode": 0,
[2025-11-26 11:05:35]     "exeErrorDiag": "",
[2025-11-26 11:05:35]     "pilotErrorCode": 0,
[2025-11-26 11:05:35]     "pilotErrorDiag": "",
[2025-11-26 11:05:35]  *** Listing of results directory ***
[2025-11-26 11:05:35] total 1315464
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc    576529 Nov 23 14:20 pilot3.tar.gz
[2025-11-26 11:05:35] -rwx------ 1 boinc boinc     36292 Nov 23 14:21 runpilot2-wrapper.sh
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc      5112 Nov 23 14:21 queuedata.json
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc       100 Nov 25 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:05:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 22:52 run_atlas
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc       105 Nov 25 22:52 job.xml
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc      6236 Nov 25 22:52 init_data.xml
[2025-11-26 11:05:35] -rw-r--r-- 2 boinc boinc 410461339 Nov 25 22:52 EVNT.47483658._000748.pool.root.1
[2025-11-26 11:05:35] -rw-r--r-- 2 boinc boinc     15847 Nov 25 22:52 start_atlas.sh
[2025-11-26 11:05:35] drwxrwx--x 2 boinc boinc        68 Nov 25 22:52 shared
[2025-11-26 11:05:35] -rw-r--r-- 2 boinc boinc    590093 Nov 25 22:52 input.tar.gz
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc         0 Nov 25 22:52 boinc_lockfile
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc      2786 Nov 25 22:52 pandaJob.out
[2025-11-26 11:05:35] -rw------- 1 boinc boinc    991893 Nov 25 22:52 agis_schedconf.cvmfs.json
[2025-11-26 11:05:35] drwx------ 5 boinc boinc      4096 Nov 25 22:52 pilot3
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc       533 Nov 26 10:50 boinc_task_state.xml
[2025-11-26 11:05:35] -rw------- 1 boinc boinc        95 Nov 26 11:03 pilot_heartbeat.json
[2025-11-26 11:05:35] -rw------- 1 boinc boinc 915621050 Nov 26 11:03 HITS.47556137._007435.pool.root.1
[2025-11-26 11:05:35] -rw------- 1 boinc boinc      1038 Nov 26 11:04 memory_monitor_summary.json
[2025-11-26 11:05:35] -rw------- 1 boinc boinc   1516240 Nov 26 11:04 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:05:35] -rw------- 1 boinc boinc   2422237 Nov 26 11:04 log.47556137._007435.job.log.tgz.1
[2025-11-26 11:05:35] -rw------- 1 boinc boinc      8612 Nov 26 11:04 heartbeat.json
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:05 boinc_mmap_file
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc        29 Nov 26 11:05 wrapper_checkpoint.txt
[2025-11-26 11:05:35] -rw------- 1 boinc boinc      4739 Nov 26 11:05 pilotlog.txt
[2025-11-26 11:05:35] -rw------- 1 boinc boinc   6103118 Nov 26 11:05 log.47556137._007435.job.log.1
[2025-11-26 11:05:35] -rw------- 1 boinc boinc       353 Nov 26 11:05 output.list
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:05 runtime_log
[2025-11-26 11:05:35] -rw------- 1 boinc boinc   8540160 Nov 26 11:05 result.tar.gz
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc      8842 Nov 26 11:05 runtime_log.err
[2025-11-26 11:05:35] -rw------- 1 boinc boinc       665 Nov 26 11:05 N5jLDmZDPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQYIKDmYtkG4n.diag
[2025-11-26 11:05:35] -rw-r--r-- 1 boinc boinc     21323 Nov 26 11:05 stderr.txt
[2025-11-26 11:05:35] HITS file was successfully produced:
[2025-11-26 11:05:35] -rw------- 1 boinc boinc 915621050 Nov 26 11:03 shared/HITS.pool.root.1
[2025-11-26 11:05:35]  *** Contents of shared directory: ***
[2025-11-26 11:05:35] total 1303944
[2025-11-26 11:05:35] -rw-r--r-- 2 boinc boinc 410461339 Nov 25 22:52 ATLAS.root_0
[2025-11-26 11:05:35] -rw-r--r-- 2 boinc boinc     15847 Nov 25 22:52 start_atlas.sh
[2025-11-26 11:05:35] -rw-r--r-- 2 boinc boinc    590093 Nov 25 22:52 input.tar.gz
[2025-11-26 11:05:35] -rw------- 1 boinc boinc 915621050 Nov 26 11:03 HITS.pool.root.1
[2025-11-26 11:05:35] -rw------- 1 boinc boinc   8540160 Nov 26 11:05 result.tar.gz
11:05:36 (2118737): run_atlas exited; CPU time 510525.473623
11:05:36 (2118737): called boinc_finish(0)

</stderr_txt>
]]>

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