Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:14:41 (1717477): wrapper (7.7.26015): starting
19:14:41 (1717477): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 19:14:41] Arguments: --nthreads 3
[2025-11-27 19:14:41] Threads: 3
[2025-11-27 19:14:41] Checking for CVMFS
[2025-11-27 19:14:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 19:14:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 19:14:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 19:14:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 19:14:41] 2.9.2.0 1300652 2951 77204 153379 2 71 29536733 36864001 0 130560 0 1089416 99.979 125238 1538 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 19:14:41] CVMFS is ok
[2025-11-27 19:14:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 19:14:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 19:14:41] Further information can be found at the LHC@home message board.
[2025-11-27 19:14:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 19:14:41] Checking for apptainer binary...
[2025-11-27 19:14:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 19:14:41] Running /usr/bin/apptainer --version
[2025-11-27 19:14:41] apptainer version 1.4.1-1.1
[2025-11-27 19:14:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 19:14:41] thA305
[2025-11-27 19:14:41] apptainer works
[2025-11-27 19:14:41] Set ATHENA_PROC_NUMBER=3
[2025-11-27 19:14:41] Set ATHENA_CORE_NUMBER=3
[2025-11-27 19:14:41] Starting ATLAS job with PandaID=6894053057
[2025-11-27 19:14:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:43:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:43:04] 2025-11-27 20:42:34,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:43:04] 2025-11-27 20:42:35,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:43:04] 2025-11-27 20:42:35,716 | INFO     | aborting loop
[2025-11-27 21:43:04] 2025-11-27 20:42:35,751 | INFO     | all data control threads have been joined
[2025-11-27 21:43:04] 2025-11-27 20:42:35,984 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:35,985 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,112 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,116 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,412 | INFO     | all payload control threads have been joined
[2025-11-27 21:43:04] 2025-11-27 20:42:36,468 | INFO     | all job control threads have been joined
[2025-11-27 21:43:04] 2025-11-27 20:42:36,614 | INFO     | [job] validate thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,621 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,648 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,675 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,722 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,757 | INFO     | [data] control thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:36,985 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:37,014 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:37,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:43:04] 2025-11-27 20:42:37,418 | INFO     | [payload] control thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:37,473 | INFO     | [job] control thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:41,132 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:45,540 | INFO     | job.realtimelogging is not enabled
[2025-11-27 21:43:04] 2025-11-27 20:42:46,546 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:43:04] 2025-11-27 20:42:58,592 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:43:04] 2025-11-27 20:42:58,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295191492416)>', '<ExcThread(monitor, started 140294569850624)>']
[2025-11-27 21:43:04] 2025-11-27 20:43:03,940 | INFO     | all workflow threads have been joined
[2025-11-27 21:43:04] 2025-11-27 20:43:03,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:43:04] 2025-11-27 20:43:03,940 | INFO     | traces error code: 0
[2025-11-27 21:43:04] 2025-11-27 20:43:03,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:43:04] 2025-11-27 20:43:04,667 | INFO     | PID=1721200 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:43:04] 2025-11-27 20:43:04,668 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:43:04] 2025-11-27 20:43:04,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:43:04] 2025-11-27 20:43:04,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:43:04] 2025-11-27 20:43:04,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:43:04] 2025-11-27 20:43:04,668 | INFO     | [monitor] control thread has ended
[2025-11-27 21:43:04] 2025-11-27 20:43:04,717 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:43:04] 2025-11-27 20:43:04,719 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:43:04] 2025-11-27 20:43:04,721 [wrapper] pilotpid: 1721200
[2025-11-27 21:43:04] 2025-11-27 20:43:04,723 [wrapper] Pilot exit status: 0
[2025-11-27 21:43:04] 2025-11-27 20:43:04,731 [wrapper] pandaids: 6894053057
[2025-11-27 21:43:04] 2025-11-27 20:43:04,748 [wrapper] cleanup supervisor_pilot 1746504 1721201
[2025-11-27 21:43:04] 2025-11-27 20:43:04,750 [wrapper] Test setup, not cleaning
[2025-11-27 21:43:04] 2025-11-27 20:43:04,752 [wrapper] apfmon messages muted
[2025-11-27 21:43:04] 2025-11-27 20:43:04,754 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:43:04] 2025-11-27 20:43:04,757 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:43:04]  *** Error codes and diagnostics ***
[2025-11-27 21:43:04]     "exeErrorCode": 0,
[2025-11-27 21:43:04]     "exeErrorDiag": "",
[2025-11-27 21:43:04]     "pilotErrorCode": 0,
[2025-11-27 21:43:04]     "pilotErrorDiag": "",
[2025-11-27 21:43:04]  *** Listing of results directory ***
[2025-11-27 21:43:04] total 603496
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc    576529 Nov 23 14:42 pilot3.tar.gz
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc      5112 Nov 23 14:49 queuedata.json
[2025-11-27 21:43:04] -rwx------ 1 boinc boinc     36292 Nov 23 14:50 runpilot2-wrapper.sh
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc       100 Nov 27 19:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:43:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 19:14 run_atlas
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc       105 Nov 27 19:14 job.xml
[2025-11-27 21:43:04] -rw-r--r-- 2 boinc boinc 309903429 Nov 27 19:14 EVNT.47523616._000001.pool.root.1
[2025-11-27 21:43:04] -rw-r--r-- 2 boinc boinc    589951 Nov 27 19:14 input.tar.gz
[2025-11-27 21:43:04] -rw-r--r-- 2 boinc boinc     15847 Nov 27 19:14 start_atlas.sh
[2025-11-27 21:43:04] drwxrwx--x 2 boinc boinc      4096 Nov 27 19:14 shared
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc         0 Nov 27 19:14 boinc_setup_complete
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc      6440 Nov 27 19:14 init_data.xml
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc         0 Nov 27 19:14 boinc_lockfile
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc      2606 Nov 27 19:14 pandaJob.out
[2025-11-27 21:43:04] -rw------- 1 boinc boinc    991223 Nov 27 19:14 agis_schedconf.cvmfs.json
[2025-11-27 21:43:04] -rw------- 1 boinc boinc   1516240 Nov 27 19:14 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:43:04] drwx------ 5 boinc boinc      4096 Nov 27 19:14 pilot3
[2025-11-27 21:43:04] -rw------- 1 boinc boinc 301069195 Nov 27 21:42 HITS.47523618._000003.pool.root.1
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc       529 Nov 27 21:42 boinc_task_state.xml
[2025-11-27 21:43:04] -rw------- 1 boinc boinc      1035 Nov 27 21:42 memory_monitor_summary.json
[2025-11-27 21:43:04] -rw------- 1 boinc boinc    297016 Nov 27 21:42 log.47523618._000003.job.log.tgz.1
[2025-11-27 21:43:04] -rw------- 1 boinc boinc      7751 Nov 27 21:42 heartbeat.json
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc        27 Nov 27 21:42 wrapper_checkpoint.txt
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc      8192 Nov 27 21:42 boinc_mmap_file
[2025-11-27 21:43:04] -rw------- 1 boinc boinc        95 Nov 27 21:43 pilot_heartbeat.json
[2025-11-27 21:43:04] -rw------- 1 boinc boinc       747 Nov 27 21:43 pilotlog.txt
[2025-11-27 21:43:04] -rw------- 1 boinc boinc   1265519 Nov 27 21:43 log.47523618._000003.job.log.1
[2025-11-27 21:43:04] -rw------- 1 boinc boinc       357 Nov 27 21:43 output.list
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc       620 Nov 27 21:43 runtime_log
[2025-11-27 21:43:04] -rw------- 1 boinc boinc   1576960 Nov 27 21:43 result.tar.gz
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc      8897 Nov 27 21:43 runtime_log.err
[2025-11-27 21:43:04] -rw------- 1 boinc boinc       659 Nov 27 21:43 79FODmWfPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxYIKDmpXIlen.diag
[2025-11-27 21:43:04] -rw-r--r-- 1 boinc boinc      7160 Nov 27 21:43 stderr.txt
[2025-11-27 21:43:04] HITS file was successfully produced:
[2025-11-27 21:43:04] -rw------- 1 boinc boinc 301069195 Nov 27 21:42 shared/HITS.pool.root.1
[2025-11-27 21:43:04]  *** Contents of shared directory: ***
[2025-11-27 21:43:04] total 598800
[2025-11-27 21:43:04] -rw-r--r-- 2 boinc boinc 309903429 Nov 27 19:14 ATLAS.root_0
[2025-11-27 21:43:04] -rw-r--r-- 2 boinc boinc    589951 Nov 27 19:14 input.tar.gz
[2025-11-27 21:43:04] -rw-r--r-- 2 boinc boinc     15847 Nov 27 19:14 start_atlas.sh
[2025-11-27 21:43:04] -rw------- 1 boinc boinc 301069195 Nov 27 21:42 HITS.pool.root.1
[2025-11-27 21:43:04] -rw------- 1 boinc boinc   1576960 Nov 27 21:43 result.tar.gz
21:43:06 (1717477): run_atlas exited; CPU time 25844.628197
21:43:06 (1717477): called boinc_finish(0)

</stderr_txt>
]]>

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