Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:15 (431769): wrapper (7.7.26015): starting
00:03:15 (431769): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:03:15] Arguments: --nthreads 9
[2025-11-25 00:03:15] Threads: 9
[2025-11-25 00:03:15] Checking for CVMFS
[2025-11-25 00:03:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:03:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:03:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:03:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:03:16] 2.13.3.0 12388 28118 232828 153270 0 419 30376838 32935937 41898 16776704 0 110306454 99.481 134661574 36800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:03:16] CVMFS is ok
[2025-11-25 00:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:03:16] Further information can be found at the LHC@home message board.
[2025-11-25 00:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:03:16] Checking for apptainer binary...
[2025-11-25 00:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:03:16] Running /usr/bin/apptainer --version
[2025-11-25 00:03:16] apptainer version 1.4.4-1.el9
[2025-11-25 00:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:03:17] c7-4-31.aglt2.org
[2025-11-25 00:03:17] apptainer works
[2025-11-25 00:03:17] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:03:17] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:03:17] Starting ATLAS job with PandaID=6895333377
[2025-11-25 00:03:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:23:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:23:25] 2025-11-25 16:22:35,073 | INFO     | time since job start (40708s) is within the limit (172800.0s)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,258 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 11:23:25] 2025-11-25 16:22:35,262 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3118.468718749998
[2025-11-25 11:23:25] 2025-11-25 16:22:35,271 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6895333377/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,271 | INFO     | extracted standard info from prmon json
[2025-11-25 11:23:25] 2025-11-25 16:22:35,271 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:23:25] 2025-11-25 16:22:35,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:23:25] 2025-11-25 16:22:35,276 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:23:25] 2025-11-25 16:22:35,277 | INFO     | sum of square deviations: 91595865925.98936
[2025-11-25 11:23:25] 2025-11-25 16:22:35,282 | INFO     | sum of deviations: 948968805014.4297
[2025-11-25 11:23:25] 2025-11-25 16:22:35,282 | INFO     | mean x: 1764067409.2087088
[2025-11-25 11:23:25] 2025-11-25 16:22:35,282 | INFO     | mean y: 3033180.442942943
[2025-11-25 11:23:25] 2025-11-25 16:22:35,282 | INFO     | intersect: -18273391463.376015
[2025-11-25 11:23:25] 2025-11-25 16:22:35,282 | INFO     | chi2: 6.344864673130165
[2025-11-25 11:23:25] 2025-11-25 16:22:35,283 | INFO     | sum of square deviations: 89548371490.95926
[2025-11-25 11:23:25] 2025-11-25 16:22:35,287 | INFO     | sum of deviations: 1139736895195.9868
[2025-11-25 11:23:25] 2025-11-25 16:22:35,288 | INFO     | mean x: 1764067256.7140696
[2025-11-25 11:23:25] 2025-11-25 16:22:35,288 | INFO     | mean y: 3047373.904689864
[2025-11-25 11:23:25] 2025-11-25 16:22:35,288 | INFO     | intersect: -22449315573.725033
[2025-11-25 11:23:25] 2025-11-25 16:22:35,288 | INFO     | chi2: 4.033810266498809
[2025-11-25 11:23:25] 2025-11-25 16:22:35,288 | INFO     | current chi2=4.033810266498809 (change=36.42401415460331 %)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,289 | INFO     | sum of square deviations: 87531581741.82756
[2025-11-25 11:23:25] 2025-11-25 16:22:35,298 | INFO     | sum of deviations: 1138334366967.858
[2025-11-25 11:23:25] 2025-11-25 16:22:35,298 | INFO     | mean x: 1764067104.2179878
[2025-11-25 11:23:25] 2025-11-25 16:22:35,298 | INFO     | mean y: 3047262.0289634145
[2025-11-25 11:23:25] 2025-11-25 16:22:35,298 | INFO     | intersect: -22938366230.207996
[2025-11-25 11:23:25] 2025-11-25 16:22:35,299 | INFO     | chi2: 3.9919821549233268
[2025-11-25 11:23:25] 2025-11-25 16:22:35,299 | INFO     | current chi2=3.9919821549233268 (change=1.0369380018408036 %)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,299 | INFO     | right removable region: 655
[2025-11-25 11:23:25] 2025-11-25 16:22:35,300 | INFO     | sum of square deviations: 89548083570.95927
[2025-11-25 11:23:25] 2025-11-25 16:22:35,310 | INFO     | sum of deviations: 692817363071.7532
[2025-11-25 11:23:25] 2025-11-25 16:22:35,310 | INFO     | mean x: 1764067561.7140696
[2025-11-25 11:23:25] 2025-11-25 16:22:35,310 | INFO     | mean y: 3052246.273827534
[2025-11-25 11:23:25] 2025-11-25 16:22:35,310 | INFO     | intersect: -13645220141.584562
[2025-11-25 11:23:25] 2025-11-25 16:22:35,311 | INFO     | chi2: 2.875488825883588
[2025-11-25 11:23:25] 2025-11-25 16:22:35,311 | INFO     | current chi2=2.875488825883588 (change=54.680060584097546 %)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,312 | INFO     | sum of square deviations: 87531126255.26202
[2025-11-25 11:23:25] 2025-11-25 16:22:35,321 | INFO     | sum of deviations: 614918560180.9348
[2025-11-25 11:23:25] 2025-11-25 16:22:35,322 | INFO     | mean x: 1764067714.2164633
[2025-11-25 11:23:25] 2025-11-25 16:22:35,322 | INFO     | mean y: 3058125.8948170734
[2025-11-25 11:23:25] 2025-11-25 16:22:35,322 | INFO     | intersect: -12389767435.65734
[2025-11-25 11:23:25] 2025-11-25 16:22:35,323 | INFO     | chi2: 2.5483585405883886
[2025-11-25 11:23:25] 2025-11-25 16:22:35,323 | INFO     | current chi2=2.5483585405883886 (change=11.376510398877237 %)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,323 | INFO     | left removable region: 20
[2025-11-25 11:23:25] 2025-11-25 16:22:35,323 | INFO     | sum of square deviations: 79391429674.34035
[2025-11-25 11:23:25] 2025-11-25 16:22:35,332 | INFO     | sum of deviations: 732748263054.3989
[2025-11-25 11:23:25] 2025-11-25 16:22:35,332 | INFO     | mean x: 1764067683.703937
[2025-11-25 11:23:25] 2025-11-25 16:22:35,332 | INFO     | mean y: 3078257.560629921
[2025-11-25 11:23:25] 2025-11-25 16:22:35,332 | INFO     | intersect: -16278496925.638725
[2025-11-25 11:23:25] 2025-11-25 16:22:35,333 | INFO     | chi2: 0.12130551463207583
[2025-11-25 11:23:25] 2025-11-25 16:22:35,333 | INFO     | current memory leak: 9.23 B/s (using 635 data points, chi2=0.12)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,334 | INFO     | could have reported an average CPU frequency of 3065 MHz (26 samples)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | ..............................
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . Timing measurements:
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . get job = 0 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . initial setup = 5 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . payload setup = 22 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . stage-in = 0 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . payload execution = 40634 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . stage-out = 3 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | . log creation = 0 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,335 | INFO     | ..............................
[2025-11-25 11:23:25] 2025-11-25 16:22:35,417 | INFO     | 
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | job summary report
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | --------------------------------------------------
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | PanDA job id: 6895333377
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | task id: 47556137
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | errors: (none)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | pilot state: finished 
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | transexitcode: 0
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | exeerrorcode: 0
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | exeerrordiag: 
[2025-11-25 11:23:25] 2025-11-25 16:22:35,418 | INFO     | exitcode: 0
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | exitmsg: OK
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | cpuconsumptiontime: 202532 s
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | nevents: 1000
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | neventsw: 0
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | pid: 448356
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | pgrp: 448356
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | corecount: 9
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | event service: False
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 16: 2284628, 23: 2284656, 40660: 2329114, 40664: 2338169, 40668: 2338359}
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | --------------------------------------------------
[2025-11-25 11:23:25] 2025-11-25 16:22:35,419 | INFO     | 
[2025-11-25 11:23:25] 2025-11-25 16:22:35,420 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-25 11:23:25] 2025-11-25 16:22:35,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:23:25] 2025-11-25 16:22:35,445 | INFO     | job 6895333377 has completed (purged errors)
[2025-11-25 11:23:25] 2025-11-25 16:22:35,446 | INFO     | overall cleanup function is called
[2025-11-25 11:23:25] 2025-11-25 16:22:36,462 | INFO     | --- collectZombieJob: --- 10, [448356]
[2025-11-25 11:23:25] 2025-11-25 16:22:36,463 | INFO     | zombie collector waiting for pid 448356
[2025-11-25 11:23:25] 2025-11-25 16:22:36,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:23:25] 2025-11-25 16:22:36,463 | INFO     | collected zombie processes
[2025-11-25 11:23:25] 2025-11-25 16:22:36,463 | INFO     | will attempt to kill all subprocesses of pid=448356
[2025-11-25 11:23:25] 2025-11-25 16:22:37,057 | INFO     | process IDs to be killed: [448356] (in reverse order)
[2025-11-25 11:23:25] 2025-11-25 16:22:37,250 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:23:25] 2025-11-25 16:22:37,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:23:25] 2025-11-25 16:22:37,277 | INFO     | did not find any defunct processes belonging to 448356
[2025-11-25 11:23:25] 2025-11-25 16:22:37,305 | INFO     | did not find any defunct processes belonging to 448356
[2025-11-25 11:23:25] 2025-11-25 16:22:37,307 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:23:25] 2025-11-25 16:22:37,307 | INFO     | ready for new job
[2025-11-25 11:23:25] 2025-11-25 16:22:37,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:23:25] 2025-11-25 16:22:37,311 | INFO     | ***************************************
[2025-11-25 11:23:25] 2025-11-25 16:22:37,312 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:23:25] 2025-11-25 16:22:37,312 | INFO     | ***************************************
[2025-11-25 11:23:25] 2025-11-25 16:22:37,312 | INFO     | 
[2025-11-25 11:23:25] 2025-11-25 16:22:37,321 | INFO     | architecture information:
[2025-11-25 11:23:25] 2025-11-25 16:22:37,321 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:23:25] 2025-11-25 16:22:37,339 | INFO     | cat /etc/os-release:
[2025-11-25 11:23:25] NAME="CentOS Linux"
[2025-11-25 11:23:25] VERSION="7 (Core)"
[2025-11-25 11:23:25] ID="centos"
[2025-11-25 11:23:25] ID_LIKE="rhel fedora"
[2025-11-25 11:23:25] VERSION_ID="7"
[2025-11-25 11:23:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:23:25] ANSI_COLOR="0;31"
[2025-11-25 11:23:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:23:25] HOME_URL="https://www.centos.org/"
[2025-11-25 11:23:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:23:25] 
[2025-11-25 11:23:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:23:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:23:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:23:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:23:25] 
[2025-11-25 11:23:25] 2025-11-25 16:22:37,339 | INFO     | ***************************************
[2025-11-25 11:23:25] 2025-11-25 16:22:37,842 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-25 11:23:25] 2025-11-25 16:22:37,861 | INFO     | sufficient remaining disk space (67458039808 B)
[2025-11-25 11:23:25] 2025-11-25 16:22:37,861 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:23:25] 2025-11-25 16:22:37,861 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:23:25] 2025-11-25 16:22:37,862 | INFO     | update_server=False
[2025-11-25 11:23:25] 2025-11-25 16:22:37,862 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:23:25] 2025-11-25 16:22:37,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:23:25] 2025-11-25 16:22:38,270 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 11:23:25] 2025-11-25 16:22:38,270 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 11:23:25] 2025-11-25 16:22:38,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:23:25] 2025-11-25 16:22:38,270 | INFO     | will abort loop
[2025-11-25 11:23:25] 2025-11-25 16:22:38,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:23:25] 2025-11-25 16:22:38,701 | INFO     | all data control threads have been joined
[2025-11-25 11:23:25] 2025-11-25 16:22:38,868 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:38,873 | INFO     | all payload control threads have been joined
[2025-11-25 11:23:25] 2025-11-25 16:22:38,890 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:38,946 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:38,947 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,097 | INFO     | all job control threads have been joined
[2025-11-25 11:23:25] 2025-11-25 16:22:39,129 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,274 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,276 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,706 | INFO     | [job] validate thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,707 | INFO     | [data] control thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,718 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:39,879 | INFO     | [payload] control thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:40,102 | INFO     | [job] control thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:40,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:23:25] 2025-11-25 16:22:40,619 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:41,436 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:22:41,867 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:23:25] 2025-11-25 16:23:08,896 | INFO     | PID=436254 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 11:23:25] 2025-11-25 16:23:08,897 | INFO     | .. there are 45 such processes running
[2025-11-25 11:23:25] 2025-11-25 16:23:08,897 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:23:25] 2025-11-25 16:23:08,897 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:23:25] 2025-11-25 16:23:08,897 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:23:25] 2025-11-25 16:23:18,013 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:23:25] 2025-11-25 16:23:19,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140679980689216)>', '<ExcThread(monitor, started 140679489509120)>']
[2025-11-25 11:23:25] 2025-11-25 16:23:19,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:23:25] 2025-11-25 16:23:19,954 | INFO     | [monitor] control thread has ended
[2025-11-25 11:23:25] 2025-11-25 16:23:24,882 | INFO     | all workflow threads have been joined
[2025-11-25 11:23:25] 2025-11-25 16:23:24,883 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:23:25] 2025-11-25 16:23:24,883 | INFO     | traces error code: 0
[2025-11-25 11:23:25] 2025-11-25 16:23:24,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:23:25] 2025-11-25 16:23:25,050 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:23:25] 2025-11-25 16:23:25,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:23:25] 2025-11-25 16:23:25,055 [wrapper] pilotpid: 436254
[2025-11-25 11:23:25] 2025-11-25 16:23:25,057 [wrapper] Pilot exit status: 0
[2025-11-25 11:23:25] 2025-11-25 16:23:25,066 [wrapper] pandaids: 6895333377
[2025-11-25 11:23:25] 2025-11-25 16:23:25,195 [wrapper] cleanup supervisor_pilot 3385651 436255
[2025-11-25 11:23:25] 2025-11-25 16:23:25,198 [wrapper] Test setup, not cleaning
[2025-11-25 11:23:25] 2025-11-25 16:23:25,200 [wrapper] apfmon messages muted
[2025-11-25 11:23:25] 2025-11-25 16:23:25,203 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:23:25] 2025-11-25 16:23:25,206 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:23:25]  *** Error codes and diagnostics ***
[2025-11-25 11:23:25]     "exeErrorCode": 0,
[2025-11-25 11:23:25]     "exeErrorDiag": "",
[2025-11-25 11:23:25]     "pilotErrorCode": 0,
[2025-11-25 11:23:25]     "pilotErrorDiag": "",
[2025-11-25 11:23:25]  *** Listing of results directory ***
[2025-11-25 11:23:25] total 1307792
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 20:28 pilot3.tar.gz
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 20:35 queuedata.json
[2025-11-25 11:23:25] -rwx------. 1 boincer umatlas     36292 Nov 21 20:36 runpilot2-wrapper.sh
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:23:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:03 run_atlas
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:03 job.xml
[2025-11-25 11:23:25] -rw-r--r--. 2 boincer umatlas 409184754 Nov 25 00:03 EVNT.47483658._000201.pool.root.1
[2025-11-25 11:23:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 11:23:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:03 shared
[2025-11-25 11:23:25] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:03 input.tar.gz
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:03 boinc_lockfile
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:03 pandaJob.out
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas        57 Nov 25 00:03 setup.sh.local
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-25 11:23:25] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas       531 Nov 25 11:15 boinc_task_state.xml
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas      6946 Nov 25 11:21 init_data.xml
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas 911467464 Nov 25 11:21 HITS.47556137._001990.pool.root.1
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas      1068 Nov 25 11:22 memory_monitor_summary.json
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas        95 Nov 25 11:22 pilot_heartbeat.json
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas   1516240 Nov 25 11:22 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas   2001166 Nov 25 11:22 log.47556137._001990.job.log.tgz.1
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas      8617 Nov 25 11:22 heartbeat.json
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 11:23 boinc_mmap_file
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas        28 Nov 25 11:23 wrapper_checkpoint.txt
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas      5009 Nov 25 11:23 pilotlog.txt
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas   5299431 Nov 25 11:23 log.47556137._001990.job.log.1
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas       353 Nov 25 11:23 output.list
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas       620 Nov 25 11:23 runtime_log
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas   7321600 Nov 25 11:23 result.tar.gz
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas      9338 Nov 25 11:23 runtime_log.err
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas       664 Nov 25 11:23 rJnLDmsirg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHqJKDmI7yPFn.diag
[2025-11-25 11:23:25] -rw-r--r--. 1 boincer umatlas     21300 Nov 25 11:23 stderr.txt
[2025-11-25 11:23:25] HITS file was successfully produced:
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas 911467464 Nov 25 11:21 shared/HITS.pool.root.1
[2025-11-25 11:23:25]  *** Contents of shared directory: ***
[2025-11-25 11:23:25] total 1297460
[2025-11-25 11:23:25] -rw-r--r--. 2 boincer umatlas 409184754 Nov 25 00:03 ATLAS.root_0
[2025-11-25 11:23:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:03 start_atlas.sh
[2025-11-25 11:23:25] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:03 input.tar.gz
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas 911467464 Nov 25 11:21 HITS.pool.root.1
[2025-11-25 11:23:25] -rw-------. 1 boincer umatlas   7321600 Nov 25 11:23 result.tar.gz
11:23:26 (431769): run_atlas exited; CPU time 203322.271027
11:23:26 (431769): called boinc_finish(0)

</stderr_txt>
]]>

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